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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40679_c2_seq17
Scaffold_idBomo_Scaf003
NCBI non-redundant
(nr)		PREDICTED:_paxillin_isoform_X2_[Bombyx_mori]
Ontology
GO:0001725 C stress fiber
GO:0005515 F protein binding
GO:0005623 C obsolete cell
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0008270 F zinc ion binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0035994 P response to muscle stretch
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.22 TPM:0.17
ORF EntryO_BomoMG20128_complete:A_BomoMG_comp40679_c2_seq17
Sequence
(Nucleotide)
CGAATACTCTCCTCACGGCGCACTCACCTGCCGCAGGGCCGGCGTCGCATCCGTGACATT
GCCTTATCGCTTATCGCAAATTTTATCGATAAATAACCGAATAATCGATAATGACGATCC
ATATCTGTGTACCGTTACGCCGATAGCACACAGTTCCGTCGCGTCCTTGACACATTCAAC
CCGAGTTTGTAAACAAGTGCATAAGGGCAATTAATTGACTTGTAAATAAATGTTTATGGA
TACACTATGTTGATGTAGTACTAGAAACGCTCGATTTAAATGGCGTAGGCAGTGATTATG
GACTGTTAACACGGTGTCGGTATCGTGGGTGTCAATAACTAAGAGAACAGCTTTCCGATT
GGTCGAAGATGGATAGGACAATGTATGGCAAAGTGCTACCAGGCACTTACTATCCATTCC
GCTGCGCTATGAAGGAGAACGGAATATCGCCTGGCTATGCTTTGCTTGCCGACCTCCAGA
ACTCTATCAACCCTGGCGGCGCCCGAGTCAGCAGCCCCAGCGGCAGGACCACGTCGCCCG
GCGGTCGCACCAGTTCCCCGGGCAGAACTGGGTCTCCTCTAGGCAGAGGCACTTCACCGG
GCCGTCTCAGCTCGTCAGGCAGCCTGAGTTCCCCCACCTCCACCGGCTACGGATCCATCA
ATGGATCTAGGAATATTAGCTCGGATTATGCAAAACCTGCTTCGCCAACTTACCAAAACA
CAAGCTCATTCCACTCAGAGAAGATGACTCCGCACAAATATACGAGTACCGTCCAAAGCA
ACTACAGTACCCACACGCCCGGTTACAACGTGGGACAATCGCCAGGCTACGGCAGGACCG
GTGGTCGAGGGAACCTGAGCGAGCTGGACACCCTACTCGACGACTTGAGCAGTGCCCGCT
ACGGGAATTACGCAGAAAAAACTTCGTTCACCGAAAGATCTGTAAATGACAGCTACGGGC
GCAGTAACGGAGCCATCAGTCCGGCGTCAGCGAGGCCCACGGTCGACTCCTTGCTGGATC
AATTAAGCGCGGAAATACCTAATGGCCGCCAATCCACATCTCCAATACCACCGCCATCGA
CGGGAGGAACTCTCCCCAGACCGGGCACCAAACAGGTGACCGTCACCGTGCAGGAGACGG
TCGTAGAACCCGCTCAGGCTCAGCAACAGATTCCAGTGGCGGCCCCTGTAGTCCGGCACC
AGCACCACGCGTCCAGCGCCACCAAGGAACTTGATGACTTGATGGCGTCGCTCTCCGACT
TCAAGGTTAGCGGCACAGGGGGAGATAGCGGGACTCACGTGTACAGAGAGAAACGCGCGT
GGCAGGAACAGTACCGCACCAACCCGCGTCAACCCGAGTCCGCATCTCTCGAGCATATGC
TCGGATCTCTTCGGGCAGACATGAGCCGCCAAGGAGTACAAACCCCCCAGAAGGGATGCT
GTAACGCCTGCGAGAAACCAATCGTTGGACAGGTGATCACGGCGCTGGGTCGCACCTGGC
ACCCTGAGCACTTCACCTGCGCTCACTGCAACCAGGAACTGGGCACGAGGAACTTCTTCG
AGCGCGACGGCAGGCCCTACTGCGAACCCGACTACCACAATCTGTTCTCACCGAGATGCG
CTTACTGCAACGGACCAATCTTGGATAAATGCGTCACAGCTCTAGAGAAAACGTGGCACA
CGGAGCACTTCTTTTGCGCTCAATGCGGTCAGCAATTTGGGGAAGAGGGTTTCCATGAAA
GGGACGGGAAGCCCTACTGCAGGGCTGATTACTTTGACATGTTCGCCCCCAAATGCGGTG
GTTGCAATAAGCCCATAATGGAAAACTATATCTCAGCGCTCAACACCCAGTGGCATCCAG
ACTGTTTCGTTTGCAAGGAATGCCGTGAGCCTTTCCACGGAGGTTCGTTCTTCGAGCACG
AGGGCCAACCGTACTGCGAGACGCATTACCACGGAAAGCGAGGGTCATTATGCGCGGGCT
GCCACAAACCGATCGCGGGCCGATGCATCACGGCGATGTTCAGGAAATTCCACCCGGAGC
ACTTCGTCTGCGCGTTTTGCCTTCGACAACTCAACAAAGGCACTTTCAAAGAACAAAACG
ACAAGCCGTACTGCCACGCGTGCTTTGACAAGCTGTTCGGGTAAAATGGCGGCGAGCGAA
CGCAAAATGGCGCCTGTTGTTGTCACATCAAAATGTCGGATATCGACAAATAAATTTTAT
GTAATACGACTTTTATTAATTATTGATCGGATACAATATATTCGTATTGTTATAAAAATC
GATTTATTATATTATTAAACTAAATGGAATAACATTAGATTTTATGTGAGAACATTGTTT
GTTTTTTGTGAGATTTAAAGTCTCGAACAATGAAGTCTAAATATAAACTCATCTGCTCAC
GATCTTAATAGCTCATTGAAAAAGATAATCGATAATCGAAAATTCGAAAAAAAAAAAAAC
ATTTTTTATTGGTCTAAGTTGTAAAGTTATCAATAAAAGTAAGGAATAATACGCAGTAGT
AATTTACTACCATTAATTCCTTAAAATCTCTATAAAATTCACTACAGTTATGTTTAAGGT
AAAGAAAACAATGAAAAAAATATTCATTTTCTTACTAAAATGTTAAATTTCTTAAAATAT
AACGGATATTCTTTGAAATAGTAGTAGCTAGATAAGTGCATGTGATGACTAATTATAAAA
TATTTATATAAACCCTTATACAGTTTAGATAGGTTTAAATGTTTTTGTCGTCGGTCTAAA
ATGTCACAGACATTAATTGAATAAGGTTATAAATAAATATACGCGGTTAGGTCATAAACA
ATATTTTTTTAAATAGTGTAGACCAGGAGCCTCCTATGTTATTTGTTTTAGATTTTGGTA
CGCTGATAAATTAGGAAACGGTCAGCACACCCTTGTAAGTAACAATCGCTGAATTTTTAC
TAAATCTCCCATTCTACTTAGGGAGAGAGAACTCAAATAGGGAATATTTGAAGAGTTGAA
TATGGAGTTCATGTGTCAAAGCATTTCTTGCCTAAATATCGCTAAGTAATACCACTTATA
CAACAGGTAAACATACTGTAGCTTGTTCGGAGATTTTAACGACCGGCTGTCTAAAATCAG
TCATTCGCGGAAATTTCATTTCCATGTGGTTATCGATTTTTGTTTATAAATGTCTCATAA
AATTCAAACGATAAATAAAATAAATAAATGGACATCATAAATAAATAAACCAATATGTAT
TAAAAACAATTTAGAAAAGGACCGTTTCAACAATCAAGATAGAACCCACATATTTCCATT
ATGACGTCATTGCTTCAGTTATAGAAATTTAATACCAAGTATAATATACCTGTGAAGTGA
CAGAGCATCATTAGCCTCTTTAAATTATTTCTTCAACACGGTACATATTGTATTGAATTA
TATTCTTTACTCAGTATTTGTTTTTAATAAACACGACATCAGTCAATTATATTATTAACC
CTGGTAACGTGTTATGTTAGAAAACAAATAGTGGGTACTACAGTCGTAATACCCACATTT
TATTTTGTTCAGTGAAACGGATTATATGAGGTATCATCATCATCAGCCTTTATCTGCCCA
CTGCTGGACATAGGCCTTCCCCAATGCCTTCCACATAATGCGGTCCTCCGCCTTCCGCAT
CCAACGACTTCCCGCCGTGCGCACTAAGTCGTCAGTCCACCTGGTTGGAGGACGCCCCAC
GCTCCTGGTACCCATCCGTGGCCTCCATTCGAGGACTTTTCTCCCCCATGATGCGAAATC
TTCAACATTTATATTATATTATTAGAGGCGACTTCCTCTTAAGTCAAATTCGATGGGCGG
AGCCATTGACGACGAGCACTCACGTGGACTCGTGACGTCATCTGGAGGGGCAACTCGTCA
TCTGGAGGGGCAACCGACCGACCAGCGGGGACATCACGCCACCTCGGATCACTTTTGCTG
GAAGCGCGCGCAGCGTTCACTTGTCTTAGATTTAATATTCTGTGTCGATCGTTCCAACCC
ACTTTTGTATTTTTTTTATTTATTCAAATTATTAAGCCGTTGCTAAAATCAGAAGTGGGA
TAGGGCTTGTGCCCTATCCGCTTTTGGGTTATCCTGGCGTACAGTTTATTTTTAAAATTT
GCATTAAATTAACAACGTAATGACCGATATACGTGTAACTGGAAGCAGGGTAGGAGGACG
CTCGCATTCGCCGAATGTCCGAGACCAATATTGGAGAATAATATTGGCGCGTTTAATTGC
TTAAAACTCAAATGTGAACGTTGCGCGTGAGTCGAGCCCGCTAGGGTCGCAGATAGAAGA
CGCACGTCCCTCGACCGCGGACGGTGGTGGCGCCGGACCCGTGGTGGCGTTGGGAATCAC
ATCACCGCTGCCGTCAGAGTCCCGCGCGTACGACGCTACAGACAGGATCATCGGAGCATT
AAGTGCACTGTCCAAAGTAAGGTCGAACCATTTTTATATTTCTAATTTTGACCCCAGCGT
TAATGATATCGATTCTTGGTGCGAAGTAGATTTTTTTTGTCGGATACCCTCTTATGAAAT
GTAATAAATCACCAAGTAACTAGCTCAACGACTTTATCACAACCGACCTTACGGTCTATT
TTTATTGACGCGATAGAACATGCTGGAGACTGAATGCTCAGTTTCAATGGGTGGAAATAA
CATTCGAAGGGTTCAAAATGTTACTAGTCGGCACACTCCATCAATACGTCAATTAGACAA
CAGTCCGACTGTCCAGGTCGGTGATCAAGCAAACGGGACGCCGTGTTGTTCCATCGCCGT
GTCGATTGTACCCGCGTTTGAGAATAGATGTAAAATAGTTCCACCACGCGTTGTGACAAT
AAAAAGGCAACTACCACATCAGCACGGAAGTTAACCGAATCCATTAGATTCGTAAATTCA
GATCGAGCTCATGGTTACTTTATTTCTAAGTTTTACCCTGCCGTGCAATACATAGACACA
TTGTGTAAGGAAGTAGAATGGACTAGATCCTTAACTGGGAAGGCACTGAGTATTTGTCAC
GAGTTTTGGGCTGTTTTAAGAGTGATGAGCGTACTTGGTTACACGTGTGATTGTCTAGTG
ACCGGACGTGGGGTAACTTCGTAAAAGACTTTAAGCCGTTGTGTCCGCGAAAGTTAGAGT
ATGCCAATATTCTTTATAATGCTATGCAATTAGCATCAGATTGCTTTGCCTCATACGTCG
AGTGCGCCAGGAGATCGTTGCTCTGTATTAAGATGGTCAGAGGTCTGACTGACAAACTCG
GAACTTTAATAATGATACGGGGCATAATGGGCCCTCTGGTTGACTCGCGAACGCTAGTCT
ACAGATTCACGAGTTGATTTAATTTTTGGTGGAGGTCAGGTTAGGCCGAGTCCTCGTAGG
GTTCAGGCACTAGTTGAGTCACCAGTGACGCGTAATGTCAAACATTCTTGGGGTTGACTG
CATGCTTCCAGAGATTTACGTGGTAACA
(5488 bp)

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