SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40677_c0_seq9
Scaffold_idBomo_Chr2
NCBI non-redundant
(nr)		PREDICTED:_talin-1_[Bombyx_mori]
Ontology
GO:0001726 C ruffle
GO:0003779 F actin binding
GO:0005178 F integrin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007044 P cell-substrate junction assembly
GO:0007155 P cell adhesion
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0030274 F LIM domain binding
GO:0030866 P cortical actin cytoskeleton organization
GO:0032403 F protein-containing complex binding
GO:0032587 C ruffle membrane
GO:0042995 C cell projection
GO:0051015 F actin filament binding
GO:0070062 C extracellular exosome
GO:0070527 P platelet aggregation
Transcript
Level		FPKM:4.68 TPM:3.70
ORF EntryO_BomoMG20080_5prime_partial:A_BomoMG_comp40677_c0_seq9
Sequence
(Nucleotide)
CGGGGCTGGCGGGCGGGGCTGGCGGCGGCGCAGGCCTACCGCGCGCTGCTGCAGGCCGTG
CTGCAGGCCGCCACCGGGGACTCCGCCGCGCGCCAGCAGTTCCCGGAGCTGTCCCGCCGC
GTGGCGCACACCGTCGCCGACATCATCGCCACCGCAGAACTGCTCAAAGGTTCGGACTGG
GTGGACCCCGACGACCCCACGGTGATAGCCGAGAACGAGCTGCTGGGGGCCGCCGCCTCC
ATAGACGCGGCCGCCAAGAAGCTGGACTCGCTCCGGCCCAGGAAACCAGTGAAGCAGGAA
GCCGATGAGACTCTGAACTTCGACGAAATGATCTTGGAAGCTGCCAAGTCCATTATAGCT
GCGACGTCGGCCCTCGTCAGGGCTGCCTCCGCGGCGCAGCGGGAACTCATCGACCAGGGT
GCCGTGGCGCGCCGGCCCGCCATGTCGTCGGACGACGGGTCGTGGTCGGGCGGGCTGGTG
AGCGCGGCGCGGCTGGTGGCGGCGGCCACGCACTCGCTGGTGGAGGCGGCCAACGCGCTG
GTGCAGGGCGCCGCCACCGAGGAGCGCCTCATCTCCAGCGCCAGGCAGGTCGCCTCCTCC
ACCGCGCACCTCCTCGTCGCCTGCAAGGTGAAGGCGGACCCCGGGGCGGAGAGCACGCGG
CGGCTGCAGGCGGCGGGCGCGGAGGTCATCCGCTCCACGGACAACCTGGTGCGCGCCGCC
CGGGACGCCATCCACTGCGACGACGAGCGCAGCCTCGTGCTCAACCGCCGCATGGTGGGC
GGCATCGCGCAGGAGATCGACGCCAGGTCGGAAGTGCTCCGCATCGAGAAGGAACTGGAG
GAGGCCCGCGGCAGGCTGACGGCCATCAGGCAGGCCAAGTACAAGCTGAGGAGCGACGCT
GACGACTCCGACGCTGACCCGCAGCCCGGCTACGGCAGCGACTCCTCGGGACCCCAGCGG
GTGCGGACTCCTAACAGCAGCTTCGCGAACACCACGTACAGCCCCAACAGCTCGCAGCAG
ACCACGCTGCACCAGAGCTCGCTGCTGCAGACCACGCACAGCTCCGGACTCAACTCCACT
TCCTACGGACAGCAGAACAGCAGCCCCGCCCCCCCGCAGCCCACCAGCCCGACGTTCTCC
AGCTTCCGTCCGGCGCCGGACGCGCCCAAGCAGAACTACGAAGCCTTCACGACACGCGCG
AGCGCCTCCGACGAGACGGTGGTCGTGAAAAGCCTTCGTCTGCCGGAAGTGCGTAGCGCG
TTGCTTGTCGGTGCTGACCCCGGGCCACACACGGTCCGTTACAAGCGGGAGACGCCCCCG
CCGCCGCCCCCCAGGAGGATAACGCTAAAGTACGAGGACAACGCTACTTAATTTGGCTAC
GAAACTCGAATGTACGACACGCCGCGACCGGTAGCCGAGCACTCCACCACCGAGCGACAG
GAGACCAGCCAGTACAGATACAAGCAGGAGAAGTTGGACTACGAAGCGCCCAGGACGCCC
CTGAGCCCTAAGTTCAACGCCAGAGAGCTTAAATTCGACGAGCACCCCGAGCCGATATAC
TCCACCCTGAAGAAACCCTCCGACGGTTTGGGACAGACGTTCTCGGAGCACCAGAGGTCC
ACGGAGTCCATCCCCGGAGGCACCAAGCATTCAGAATACACAATCAAAAGTGAATCTTAC
CAGTCGTTCCCGAAGACGGAGTTTTCCAAAACGGAATTTAAGCAGGAAGTGAAATCTCCA
TTCACATCCACTCCGAAGTTTGATCGCACAAGCTACGTGACCACCTCCAGTGACCTGGTG
AAGGCCGCCACGCCGGACTACGAGCGCATGGCTTCGCCCTACGCCAAGGAGGGCGACAGC
TACGGAGGTCCCAATTACATGGAGGAAACCACCACGGAGGTCAAAGAAATACCCAACGGC
ACCCAGAAGATCACTACAACGAAGATATACAGCTCGTCGCCCGTCAACCTGACCTCCACC
AGCACCAAGTACGAGCCGATCAAACTGGACGGAATCGACGAAATCTCGAAGACCTTCGAC
AGCGACTCCCGGTACAGCACCCTGGACTCGAGGTTCAACACGCTAGAGTCCAAGCTCAGT
TCGGACACGAGCCGCTCCTTCATGAGGCCGTCGGAGTTCCAGTCGTCAGACTACCAGACC
ACCAGCAACGTGACGAAGATCAAGAAGCCGGATCTGTCGAAGGAGATCGACAGCCTGGAC
AAGAGGATCTCAAAGCAAACGATCACCTCGGAGACTATCGAAAGGAAGTCCGTAATGACC
AGCTCTCACAAATCGGAGACCAGCTCCACCGTCACCAAGAAATTCGGGAACTTCTAGAAG
GTAAATGACGCAACTTGTCGTGGCGTGCTTCGTGCGTTGACAGCTGTCACCCGTGACACC
TGTCAAGGACTGTGCTTATTGTCAATGATCCGTGCTTAGTCGTTAAGAATCGAGTGTAGA
TCTTATTTTTAAGGTTTTCATTGTGTTCTACTGAACTTAGTAGAAACATTAGGTTTTTTT
TTTCTACTAAATTGGTAGAAAATCGTAAGGTGCTAAACGTTATCGTGAACTAGGTGTCTA
AACTAATGCCTTAACTGTAATTTATTGAATGTTTTTGATGTCATTTTTATTATAAAAAAA
AAACTTATCTTTATTTCTTAAAAACTATGAGTAATGTGTCATAATGATTCAACCAACTTG
TAAGAAATAACGCACGAATTGTTCATATTTTGTACACTTTTTAATTAATAGATAAAAGTT
CTTATATAAAAGTTTCATTCCTAAAAGTGGCTCCAAAGCTGAGGCCTTAATACAACAATA
CTGTGTCGAGCTTACTTCACTCATAGTTTTTATTGAATAATCTAATAACGTAATATGTAA
ATACGAACAGATCTAAGGTTTTATCTAAAGTTGATTTTGGGTAAACAAATAATTGGCCCG
TTTCAAGCGTGCGTCAGCGCTGTTGTCCCTGGGCAGCACGGCCCAGTGTCTCGCGGACGA
CGGTTGATAACAGTGCGGCTCAATAGGGCTCTATAAATGGGAACTTATGAAATTCAAAAG
GCATTGTTACAGATCGCCATACAAAAATAAATTGAGCCATAGTCTTAAATCTGTTTCGTA
CATTAAGCTATTCACAAAGTGGCCCCGGGCGCCCCGGACTGCGCCCCCGCCGCGCTCCTC
ACTCATTGATAATGGCGAGCTATTTTTGTGTTTTTTTAATGTACAATTTTTTTTTGTTAT
TTTAAAATTTATATTATTAATTAAGAAAATGTTTTAATATTTTGACAACAGATGGCAGTT
TTATAATTTTTTATTATATTATCTTATTTGCTTAGTGATGTTTAGTGTAGTGTTGCGTGT
GGAATGTGGTCCGCGGGCGCCGACATCCGCAGAGCTTATTGTTAACGTTCCAAGGAAATA
TTGTGTGTGCCATGTTGACTATTCAAATTTATTGACTAATATATATCTATTTTTATAAAA
AGCTGTTGTTATTGTCTGTGGTTCCGCGAGTTGTTGTTTTAGTGAGGTTTTTGGTTGACC
TCACCAGGACACGGCAGGACTAGGTCGGTGTAGAGCTTGTCGGAGTGGAGGGGCGGAGGC
CCACACTGCTCTAGGGTCCCTCACATGTTAACACCCCACTGAGTTATGTGTTGAATAACA
AGTCAAATATTTACATGTGGTGTATCTGTCGGTGCAAATAATTAAGCAGTATATACACAG
ACTAACTTTGAGTGCAACTAATATATTGATGTTTTAAAGTTACTACTAAAATAAAGGCTT
AAAAACTATATATATGTTTCTTTATATTTGTATTTATGGGTGTTGTGTTGTTGTCCAGAC
GACGACAGAGAGATCGCTTAGTGTCGCGCGTCCGGTTTAAATGTTACAAGAAAACAATTC
CCACCGATTTTGTTCAAAAATAAAAGTTTAAAAATTTCATTTCTTAAGTTTAGTATAAAA
AAAAAATTTTGTTTTAATGTTTCCCCCAGCGACATGACTCGAGGTGCCGACGCGACCCCC
ACTGATATTAGTTCAAATCATTCTTGTATCTCAGCATTGATTCGAGAGTCTTATGATGAA
ATGTGCCTTACGTGCAGCTCATGTGGCGCCGGACGCGCGGCCGACTGTATATGAAAACTT
ATTGCGACTGTGGTAGCTCTATCTCCGTATAAATATATATAAAGAAGTTATTTTGTACCG
CCTTTTATGCGCGTTTTGCCGATGCGCTAAATGGCAGCTGTTAGCGCGGGGTTGAGGAAA
AGGAAGACTTTGTTTCCGACTCGACTGGCAATTAACTTAAAATAATAAATTCTCTATTAA
TTACTGTTCAATCAGAACCTATATTGACCCGGACTAATTTGTTTGGAATAAGTTGCAAAA
CATTCGTCTCGTTCGCACACATAGCACGGTAACGCTCGTGTGAGCGAGACGAATATACTC
TATTTTGCTTCAGAGATGTTCTATGAATTCTTATATGAATTAAAAATTCTGTAAATAATT
TGTTTTTAGTATTTTACGGTAGATGGCGGTGTTCTCTGATCCTCACAGTGCTTCTATGGT
CACTGCTGTCCACGACGCGACGAACACTACAAACAATATCTGCTCATCTCCTAACAAAAA
ATAATGTAATCGAATTGTTTAAATATAAAAAATAATCGTTCCCAAAGCATTTACTCGTTT
TGTCTGAAAACAAATTATGAACAGTTAATTTTGTTACAATTATTATTAATTTAACAGTTT
TTATATCATTATATTATATAGTAATTTAAATAATCTCATTTATTAATGATAATACCAAAT
AATAATAGAAATGTAATCAAATACGATTTCGTCAATTGTTGTATTTTATTGAGAGTTTAA
CGTATGATAATTAATATATAAGGTAGCTGCGGCAAGAGCGGCCGGTACATGTGTAATAAA
TGTCTTACTAATGAAAAAAAA
(4941 bp)

- SilkBase 1999-2023 -