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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40677_c0_seq6
Scaffold_idBomo_Chr2
NCBI non-redundant
(nr)		PREDICTED:_talin-1_[Bombyx_mori]
Ontology
GO:0001726 C ruffle
GO:0003779 F actin binding
GO:0005178 F integrin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007044 P cell-substrate junction assembly
GO:0007155 P cell adhesion
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0030274 F LIM domain binding
GO:0030866 P cortical actin cytoskeleton organization
GO:0032403 F protein-containing complex binding
GO:0032587 C ruffle membrane
GO:0042995 C cell projection
GO:0051015 F actin filament binding
GO:0070062 C extracellular exosome
GO:0070527 P platelet aggregation
Transcript
Level		FPKM:0.29 TPM:0.23
ORF EntryO_BomoMG20075_5prime_partial:A_BomoMG_comp40677_c0_seq6
Sequence
(Nucleotide)
CGGGGCTGGCGGGCGGGGCTGGCGGCGGCGCAGGCCTACCGCGCGCTGCTGCAGGCCGTG
CTGCAGGCCGCCACCGGGGACTCCGCCGCGCGCCAGCAGTTCCCGGAGCTGTCCCGCCGC
GTGGCGCACACCGTCGCCGACATCATCGCCACCGCAGAACTGCTCAAAGGTTCGGACTGG
GTGGACCCCGACGACCCCACGGTGATAGCCGAGAACGAGCTGCTGGGGGCCGCCGCCTCC
ATAGACGCGGCCGCCAAGAAGCTGGACTCGCTCCGGCCCAGGAAACCAGTGAAGCAGGAA
GCCGATGAGACTCTGAACTTCGACGAAATGATCTTGGAAGCTGCCAAGTCCATTATAGCT
GCGACGTCGGCCCTCGTCAGGGCTGCCTCCGCGGCGCAGCGGGAACTCATCGACCAGGGT
GCCGTGGCGCGCCGGCCCGCCATGTCGTCGGACGACGGGTCGTGGTCGGGCGGGCTGGTG
AGCGCGGCGCGGCTGGTGGCGGCGGCCACGCACTCGCTGGTGGAGGCGGCCAACGCGCTG
GTGCAGGGCGCCGCCACCGAGGAGCGCCTCATCTCCAGCGCCAGGCAGGTCGCCTCCTCC
ACCGCGCACCTCCTCGTCGCCTGCAAGGTGAAGGCGGACCCCGGGGCGGAGAGCACGCGG
CGGCTGCAGGCGGCGGGCGCGGAGGTCATCCGCTCCACGGACAACCTGGTGCGCGCCGCC
CGGGACGCCATCCACTGCGACGACGAGCGCAGCCTCGTGCTCAACCGCCGCATGGTGGGC
GGCATCGCGCAGGAGATCGACGCCAGGTCGGAAGTGCTCCGCATCGAGAAGGAACTGGAG
GAGGCCCGCGGCAGGCTGACGGCCATCAGGCAGGCCAAGTACAAGCTGAGGAGCGACGCT
GACGACTCCGACGCTGACCCGCAGCCCGGCTACGGCAGCGACTCCTCGGGACCCCAGCGG
GTGCGGACTCCTAACAGCAGCTTCGCGAACACCACGTACAGCCCCAACAGCTCGCAGCAG
ACCACGCTGCACCAGAGCTCGCTGCTGCAGACCACGCACAGCTCCGGACTCAACTCCACT
TCCTACGGACAGCAGAACAGCAGCCCCGCCCCCCCGCAGCCCACCAGCCCGACGTTCTCC
AGCTTCCGTCCGGCGCCGGACGCGCCCAAGCAGAACTACGAAGCCTTCACGACACGCGCG
AGCGCCTCCGACGAGACGGTGGTCGTGAAAAGCCTTCGTCTGCCGGAAGTGCGTAGCGCG
TTGCTTGTCGGTGCTGACCCCGGGCCACACACGGTCCGTTACAAGCGGGAGACGCCCCCG
CCGCCGCCCCCCAGGAGGATAACGCTAAACTACGAAACTCGAATGTACGACACGCCGCGA
CCGGTAGCCGAGCACTCCACCACCGAGCGACAGGAGACCAGCCAGTACAGATACAAGCAG
GAGAAGTTGGACTACGAAGCGCCCAGGACGCCCCTGAGCCCTAAGTTCAACGCCAGAGAG
CTTAAATTCGACGAGCACCCCGAGCCGATATACTCCACCCTGAAGAAACCCTCCGACGGT
TTGGGACAGACGTTCTCGGAGCACCAGAGGTCCACGGAGTCCATCCCCGGAGGCACCAAG
CATTCAGAATACACAATCAAAAGTGAATCTTACCAGTCGTTCCCGAAGACGGAGTTTTCC
AAAACGGAATTTAAGCAGGAAGTGAAATCTCCATTCACATCCACTCCGAAGTTTGATCGC
ACAAGCTACGTGACCACCTCCAGTGACCTGGTGAAGGCCGCCACGCCGGACTACGAGCGC
ATGGCTTCGCCCTACGCCAAGGAGGGCGACAGCTACGGAGGTCCCAATTACATGGAGGAA
ACCACCACGGAGGTCAAAGAAATACCCAACGGCACCCAGAAGATCACTACAACGAAGATA
TACAGCTCGTCGCCCGTCAACCTGACCTCCACCAGCACCAAGTACGAGCCGATCAAACTG
GACGGAATCGACGAAATCTCGAAGACCTTCGACAGCGACTCCCGGTACAGCACCCTGGAC
TCGAGGTTCAACACGCTAGAGTCCAAGCTCAGTTCGGACACGAGCCGCTCCTTCATGAGG
CCGTCGGAGTTCCAGTCGTCAGACTACCAGACCACCAGCAACGTGACGAAGATCAAGAAG
CCGGATCTGTCGAAGGAGATCGACAGCCTGGACAAGAGGATCTCAAAGCAAACGATCACC
TCGGAGACTATCGAAAGGAAGTCCGTAATGACCAGCTCTCACAAATCGGAGACCAGCTCC
ACCGTCACCAAGAAATTCGGGAACTTCTAGAAGGTAAATGACGCAACTTGTCGTGGCGTG
CTTCGTGCGTTGACAGCTCCACCGTCACCAAGAAATTCGGGAACTTCTAGAAGGTAAATG
ACGCAACTTGTCGTGGCGTGCTTCGTGCGTTGACAGCTGTCACCCGTGACACCTGTCAAG
GACTGTGCTTATTGTCAATGATCCGTGCTTAGTCGTTAAGAATCGAGTGTAGATCTTATT
TTTAAGGTTTTCATTGTGTTCTACTGAACTTAGTAGAAACATTAGGTTTTTTTTTTCTAC
TAAATTGGTAGAAAATCGTAAGGTGCTAAACGTTATCGTGAACTAGGTGTCTAAACTAAT
GCCTTAACTGTAATTTATTGAATGTTTTTGATGTCATTTTTATTATAAAAAAAAAACTTA
TCTTTATTTCTTAAAAACTATGAGTAATGTGTCATAATGATTCAACCAACTTGTAAGAAA
TAACGCACGAATTGTTCATATTTTGTACACTTTTTAATTAATAGATAAAAGTTCTTATAT
AAAAGTTTCATTCCTAAAAGTGGCTCCAAAGCTGAGGCCTTAATACAACAATACTGTGTC
GAGCTTACTTCACTCATAGTTTTTATTGAATAATCTAATAACGTAATATGTAAATACGAA
CAGATCTAAGGTTTTATCTAAAGTTGATTTTGGGTAAACAAATAATTGGCCCGTTTCAAG
CGTGCGTCAGCGCTGTTGTCCCTGGGCAGCACGGCCCAGTGTCTCGCGGACGACGGTTGA
TAACAGTGCGGCTCAATAGGGCTCTATAAATGGGAACTTATGAAATTCAAAAGGCATTGT
TACAGATCGCCATACAAAAATAAATTGAGCCATAGTCTTAAATCTGTTTCGTACATTAAG
CTATTCACAAAGTGGCCCCGGGCGCCCCGGACTGCGCCCCCGCCGCGCTCCTCACTCATT
GATAATGGCGAGCTATTTTTGTGTTTTTTTAATGTACAATTTTTTTTTGTTATTTTAAAA
TTTATATTATTAATTAAGAAAATGTTTTAATATTTTGACAACAGATGGCAGTTTTATAAT
TTTTTATTATATTATCTTATTTGCTTAGTGATGTTTAGTGTAGTGTTGCGTGTGGAATGT
GGTCCGCGGGCGCCGACATCCGCAGAGCTTATTGTTAACGTTCCAAGGAAATATTGTGTG
TGCCATGTTGACTATTCAAATTTATTGACTAATATATATCTATTTTTATAAAAAGCTGTT
GTTATTGTCTGTGGTTCCGCGAGTTGTTGTTTTAGTGAGGTTTTTGGTTGACCTCACCAG
GACACGGCAGGACTAGGTCGGTGTAGAGCTTGTCGGAGTGGAGGGGCGGAGGCCCACACT
GCTCTAGGGTCCCTCACATGTTAACACCCCACTGAGTTATGTGTTGAATAACAAGTCAAA
TATTTACATGTGGTGTATCTGTCGGTGCAAATAATTAAGCAGTATATACACAGACTAACT
TTGAGTGCAACTAATATATTGATGTTTTAAAGTTACTACTAAAATAAAGGCTTAAAAACT
ATATATATGTTTCTTTATATTTGTATTTATGGGTGTTGTGTTGTTGTCCAGACGACGACA
GAGAGATCGCTTAGTGTCGCGCGTCCGGTTTAAATGTTACAAGAAAACAATTCCCACCGA
TTTTGTTCAAAAATAAAAGTTTAAAAATTTCATTTCTTAAGTTTAGTATAAAAAAAAAAT
TTTGTTTTAATGTTTCCCCCAGCGACATGACTCGAGGTGCCGACGCGACCCCCACTGATA
TTAGTTCAAATCATTCTTGTATCTCAGCATTGATTCGAGAGTCTTATGATGAAATGTGCC
TTACGTGCAGCTCATGTGGCGCCGGACGCGCGGCCGACTGTATATGAAAACTTATTGCGA
CTGTGGTAGCTCTATCTCCGTATAAATATATATAAAGAAGTTATTTTGTACCGCCTTTTA
TGCGCGTTTTGCCGATGCGCTAAATGGCAGCTGTTAGCGCGGGGTTGAGGAAAAGGAAGA
CTTTGTTTCCGACTCGACTGGCAATTAACTTAAAATAATAAATTCTCTATTAATTACTGT
TCAATCAGAACCTATATTGACCCGGACTAATTTGTTTGGAATAAGTTGCAAAACATTCGT
CTCGTTCGCACACATAGCACGGTAACGCTCGTGTGAGCGAGACGAATATACTCTATTTTG
CTTCAGAGATGTTCTATGAATTCTTATATGAATTAAAAATTCTGTAAATAATTTGTTTTT
AGTATTTTACGGTAGATGGCGGTGTTCTCTGATCCTCACAGTGCTTCTATGGTCACTGCT
GTCCACGACGCGACGAACACTACAAACAATATCTGCTCATCTCCTAACAAAAAATAATGT
AATCGAATTGTTTAAATATAAAAAATAATCGTTCCCAAAGCATTTACTCGTTTTGTCTGA
AAACAAATTATGAACAGTTAATTTTGTTACAATTATTATTAATTTAACAGTTTTTATATC
ATTATATTATATAGTAATTTAAATAATCTCATTTATTAATGATAATACCAAATAATAATA
GAAATGTAATCAAATACGATTTCGTCAATTGTTGTATTTTATTGAGAGTTTAACGTATGA
TAATTAATATATAAGGTAGCTGCGGCAAGAGCGGCCGGTACATGTGTAATAAATGTCTTA
CTAATGAAAAAAAA
(4994 bp)

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