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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40677_c0_seq3
Scaffold_idBomo_Chr2
NCBI non-redundant
(nr)		PREDICTED:_talin-1_isoform_X4_[Papilio_xuthus]
Ontology
GO:0001726 C ruffle
GO:0003779 F actin binding
GO:0005178 F integrin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007044 P cell-substrate junction assembly
GO:0007155 P cell adhesion
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0030274 F LIM domain binding
GO:0030866 P cortical actin cytoskeleton organization
GO:0032403 F protein-containing complex binding
GO:0032587 C ruffle membrane
GO:0042995 C cell projection
GO:0051015 F actin filament binding
GO:0070062 C extracellular exosome
GO:0070527 P platelet aggregation
Transcript
Level		FPKM:0.02 TPM:0.02
ORF EntryO_BomoMG20069_3prime_partial:A_BomoMG_comp40677_c0_seq3
Sequence
(Nucleotide)
CGGGGCTGGCGGGCGGGGCTGGCGGCGGCGCAGGCCTACCGCGCGCTGCTGCAGGCCGTG
CTGCAGGCCGCCACCGGGGACTCCGCCGCGCGCCAGCAGTTCCCGGAGCTGTCCCGCCGC
GTGGCGCACACCGTCGCCGACATCATCGCCACCGCAGAACTGCTCAAAGGTTCGGACTGG
GTGGACCCCGACGACCCCACGGTGATAGCCGAGAACGAGCTGCTGGGGGCCGCCGCCTCC
ATAGACGCGGCCGCCAAGAAGCTGGACTCGCTCCGGCCCAGGAAACCAGTGAAGCAGGAA
GCCGATGAGACTCTGAACTTCGACGAAATGATCTTGGAAGCTGCCAAGTCCATTATAGCT
GCGACGTCGGCCCTCGTCAGGGCTGCCTCCGCGGCGCAGCGGGAACTCATCGACCAGGGT
GCCGTGGCGCGCCGGCCCGCCATGTCGTCGGACGACGGGTCGTGGTCGGGCGGGCTGGTG
AGCGCGGCGCGGCTGGTGGCGGCGGCCACGCACTCGCTGGTGGAGGCGGCCAACGCGCTG
GTGCAGGGCGCCGCCACCGAGGAGCGCCTCATCTCCAGCGCCAGGCAGGTCGCCTCCTCC
ACCGCGCACCTCCTCGTCGCCTGCAAGGTGAAGGCGGACCCCGGGGCGGAGAGCACGCGG
CGGCTGCAGGCGGCGGGCGCGGAGGTCATCCGCTCCACGGACAACCTGGTGCGCGCCGCC
CGGGACGCCATCCACTGCGACGACGAGCGCAGCCTCGTGCTCAACCGCCGCATGGTGGGC
GGCATCGCGCAGGAGATCGACGCCAGGTCGGAAGTGCTCCGCATCGAGAAGGAACTGGAG
GAGGCCCGCGGCAGGCTGACGGCCATCAGGCAGGCCAAGTACAAGCTGAGGAGCGACGCT
GACGACTCCGACGCTGACCCGCAGCCCGGCTACGGCAGCGACTCCTCGGGACCCCAGCGG
GTGCGGACTCCTAACAGCAGCTTCGCGAACACCACGTACAGCCCCAACAGCTCGCAGCAG
ACCACGCTGCACCAGAGCTCGCTGCTGCAGACCACGCACAGCTCCGGACTCAACTCCACT
TCCTACGGACAGCAGAACAGCAGCCCCGCCCCCCCGCAGCCCACCAGCCCGACGTTCTCC
AGCTTCCGTCCGGCGCCGGACGCGCCCAAGCAGAACTACGAAGCCTTCACGACACGCTAC
GAAACTCGAATGTACGACACGCCGCGACCGGTAGCCGAGCACTCCACCACCGAGCGACAG
GAGACCAGCCAGTACAGATACAAGCAGGAGAAGTTGGACTACGAAGCGCCCAGGACGCCC
CTGAGCCCTAAGTTCAACGCCAGAGAGCTTAAATTCGACGAGCACCCCGAGCCGATATAC
TCCACCCTGAAGAAACCCTCCGACGGTTTGGGACAGACGTTCTCGGAGCACCAGAGGTCC
ACGGAGTCCATCCCCGGAGGCACCAAGCATTCAGAATACACAATCAAAAGTGAATCTTAC
CAGTCGTTCCCGAAGACGGAGTTTTCCAAAACGGAATTTAAGCAGGAAGTGAAATCTCCA
TTCACATCCACTCCGAAGTTTGATCGCACAAGCTACGTGACCACCTCCAGTGACCTGGTG
AAGGCCGCCACGCCGGACTACGAGCGCATGGCTTCGCCCTACGCCAAGGAGGGCGACAGC
TACGGAGGTCCCAATTACATGGAGGAAACCACCACGGAGGTCAAAGAAATACCCAACGGC
ACCCAGAAGATCACTACAACGAAGATATACAGCTCGTCGCCCGTCAACCTGACCTCCACC
AGCACCAAGTACGAGCCGATCAAACTGGACGGAATCGACGAAATCTCGAAGACCTTCGAC
AGCGACTCCCGGTACAGCACCCTGGACTCGAGGTTCAACACGCTAGAGTCCAAGCTCAGT
TCGGACACGAGCCGCTCCTTCATGAGGCCGTCGGAGTTCCAGTCGTCAGACTACCAGACC
ACCAGCAACGTGACGAAGATCAAGAAGCCGGATCTGTCGAAGGAGATCGACAGCCTGGAC
AAGAGGATCTCAAAGCAAACGATCACCTCGGAGACTATCGAAAGGAAGTCCGTAATGACC
AGCTCTCACAAATCGGAGACCAGCTCCACCGTCACCAAGAAATTCGGGAACTTCTAGAAG
GTAAATGACGCAACTTGTCGTGGCGTGCTTCGTGCGTTGACAGCTCCACCGTCACCAAGA
AATTCGGGAACTTCTAGAAGGTAAATGACGCAACTTGTCGTGGCGTGCTTCGTGCGTTGA
CAGCTGTCACCCGTGACACCTGTCAAGGACTGTGCTTATTGTCAATGATCCGTGCTTAGT
CGTTAAGAATCGAGTGTAGATCTTATTTTTAAGGTTTTCATTGTGTTCTACTGAACTTAG
TAGAAACATTAGGTTTTTTTTTTCTACTAAATTGGTAGAAAATCGTAAGGTGCTAAACGT
TATCGTGAACTAGGTGTCTAAACTAATGCCTTAACTGTAATTTATTGAATGTTTTTGATG
TCATTTTTATTATAAAAAAAAAACTTATCTTTATTTCTTAAAAACTATGAGTAATGTGTC
ATAATGATTCAACCAACTTGTAAGAAATAACGCACGAATTGTTCATATTTTGTACACTTT
TTAATTAATAGATAAAAGTTCTTATATAAAAGTTTCATTCCTAAAAGTGGCTCCAAAGCT
GAGGCCTTAATACAACAATACTGTGTCGAGCTTACTTCACTCATAGTTTTTATTGAATAA
TCTAATAACGTAATATGTAAATACGAACAGATCTAAGGTTTTATCTAAAGTTGATTTTGG
GTAAACAAATAATTGGCCCGTTTCAAGCGTGCGTCAGCGCTGTTGTCCCTGGGCAGCACG
GCCCAGTGTCTCGCGGACGACGGTTGATAACAGTGCGGCTCAATAGGGCTCTATAAATGG
GAACTTATGAAATTCAAAAGGCATTGTTACAGATCGCCATACAAAAATAAATTGAGCCAT
AGTCTTAAATCTGTTTCGTACATTAAGCTATTCACAAAGTGGCCCCGGGCGCCCCGGACT
GCGCCCCCGCCGCGCTCCTCACTCATTGATAATGGCGAGCTATTTTTGTGTTTTTTTAAT
GTACAATTTTTTTTTGTTATTTTAAAATTTATATTATTAATTAAGAAAATGTTTTAATAT
TTTGACAACAGATGGCAGTTTTATAATTTTTTATTATATTATCTTATTTGCTTAGTGATG
TTTAGTGTAGTGTTGCGTGTGGAATGTGGTCCGCGGGCGCCGACATCCGCAGAGCTTATT
GTTAACGTTCCAAGGAAATATTGTGTGTGCCATGTTGACTATTCAAATTTATTGACTAAT
ATATATCTATTTTTATAAAAAGCTGTTGTTATTGTCTGTGGTTCCGCGAGTTGTTGTTTT
AGTGAGGTTTTTGGTTGACCTCACCAGGACACGGCAGGACTAGGTCGGTGTAGAGCTTGT
CGGAGTGGAGGGGCGGAGGCCCACACTGCTCTAGGGTCCCTCACATGTTAACACCCCACT
GAGTTATGTGTTGAATAACAAGTCAAATATTTACATGTGGTGTATCTGTCGGTGCAAATA
ATTAAGCAGTATATACACAGACTAACTTTGAGTGCAACTAATATATTGATGTTTTAAAGT
TACTACTAAAATAAAGGCTTAAAAACTATATATATGTTTCTTTATATTTGTATTTATGGG
TGTTGTGTTGTTGTCCAGACGACGACAGAGAGATCGCTTAGTGTCGCGCGTCCGGTTTAA
ATGTTACAAGAAAACAATTCCCACCGATTTTGTTCAAAAATAAAAGTTTAAAAATTTCAT
TTCTTAAGTTTAGTATAAAAAAAAAATTTTGTTTTAATGTTTCCCCCAGCGACATGACTC
GAGGTGCCGACGCGACCCCCACTGATATTAGTTCAAATCATTCTTGTATCTCAGCATTGA
TTCGAGAGTCTTATGATGAAATGTGCCTTACGTGCAGCTCATGTGGCGCCGGACGCGCGG
CCGACTGTATATGAAAACTTATTGCGACTGTGGTAGCTCTATCTCCGTATAAATATATAT
AAAGAAGTTATTTTGTACCGCCTTTTATGCGCGTTTTGCCGATGCGCTAAATGGCAGCTG
TTAGCGCGGGGTTGAGGAAAAGGAAGACTTTGTTTCCGACTCGACTGGCAATTAACTTAA
AATAATAAATTCTCTATTAATTACTGTTCAATCAGAACCTATATTGACCCGGACTAATTT
GTTTGGAATAAGTTGCAAAACATTCGTCTCGTTCGCACACATAGCACGGTAACGCTCGTG
TGAGCGAGACGAATATACTCTATTTTGCTTCAGAGATGTTCTATGAATTCTTATATGAAT
TAAAAATTCTGTAAATAATTTGTTTTTAGTATTTTACGGTAGATGGCGGTGTTCTCTGAT
CCTCACAGTGCTTCTATGGTCACTGCTGTCCACGACGCGACGAACACTACAAACAATATC
TGCTCATCTCCTAACAAAAAATAATGTAATCGAATTGTTTAAATATAAAAAATAATCGTT
CCCAAAGCATTTACTCGTTTTGTCTGAAAACAAATTATGAACAGTTAATTTTGTTACAAT
TATTATTAATTTAACAGTTTTTATATCATTATATTATATAGTAATTTAAATAATCTCATT
TATTAATGATAATACCAAATAATAATAGAAATGTAATCAAATACGATTTCGTCAATTGTT
GTATTTTATTGAGAGTTTAACGTATGATAATTAATATATAAGGTAGCTGCGGCAAGAGCG
GCCGGTACATGTGTAATAAATGTCTTACTAATGAAAAAAAA
(4841 bp)

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