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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40670_c0_seq3
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_DNA-directed_RNA_polymerase_II_subunit_RPB1_[Bombyx_mori]
Ontology
GO:0001055 F RNA polymerase II activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005665 C RNA polymerase II, core complex
GO:0005700 C polytene chromosome
GO:0005703 C polytene chromosome puff
GO:0006351 P transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:7.90 TPM:6.24
ORF EntryO_BomoMG20033_3prime_partial:A_BomoMG_comp40670_c0_seq3
Sequence
(Nucleotide)
CGGGGAGATGAAGGTGAATAATTGTGAGATGATGGAGAATAATTAGGCGAGGAAGGCGAA
GACGGCGAATACCTAGTGCTACTAGGATGTTGTGATGTAGAAGAATAGCCTGGACTAGTC
GGAGAATACTGTGGACTGGTTGGAGAATATTGCTGACTTGTTGGTGAATATGTAGGACTA
CCTCCAGCCACAGAGGGCGAAGTAGGAGAATAATTCGGTGACGAGGGTGAATAATTTGGA
GAAGACTGCGAATAGCTCGGTGATGATGGAGAATATGAGCGAGAAGTAGGTGAATATGTA
GGACTCGTAGGTGAATAAACAGATCCAGAAGTGTAATTTGGAGACGAAGGCGAATAATTT
GATGAAGTAGGACTGTAGACAGGACTATTTGGTGAATATCTAGGTGACGAGGGCGAATAG
CCAGGGGATGTGGAATAACCTGGGCTCGTTGGAGAATACGATAGACTCGTGGGAGAATAC
GAAGGACTTGATGGAGAATAGTTAGGTGAAGTTGTCGGGAAATTAGAAGTTGTTGAATAA
GCCGGACTTGCTGGTGAATAGTTGGGAGATGACGGAGAGTATCTAGGAGAAGCTGGGGAG
TATAATGGGGATGTGGGCGAATAACCAGGCGATGTTGGCGAGTAGCTGGGTGATGTTGGC
GAGTATATTGGTGAAGTCGGGGAATAATTGGGTGAAGTTGGAGAGTAAGAAGGACTGGCA
GGTGAATAATGTGGTGATGTTGGAGTAATACTCGGGGACGCGGGAGCGTAAACAGGATTC
GATGGGGAGTAAGATGGTGACGCTCCTGCGGGCGACGAGTAAGGTGAAAGCGGAGGTCCG
GGAGATCCTGGTGAACCAGGTTGTGGTGACCAAGCATTACTGTATGCCGGTGAGAGTCCT
GATGCGTCAGATGCGTTAGATGGCGAGAATGATGGTCCTCCAGGAGTCATACTGCTGCCA
ACTTGACATGGAGACCACACGCTGCTTCCATATCCTGGTGTATTCTGTGTAGACCAGGGA
GTCATAAGTGGTGACATAGATGGCGTTCCGACACCGAAATACATTCCCACTTCTGCGCCT
CCAAGACCGCCCATTGCTTCCTTGCACTTCTCGCCATCAAGTAATAAATCGAAGCAACCA
GTACCCATTCTCGGCAACTGTCCCATTATAATATTTTCTGATACTCCTCTCATAGGATCC
ACTTCAGCATGACTGGCAGCGTCCAATAAAACATCGACGGTTTCCTCAAATGAACATCTC
ATAAGAGCACCAGTGTCCTGTCGGTTAATGCCGTGACGTGTGATGGCCATAAGATAACCT
TTTGCTGTCATGACGTCACAAAGCAATGCCAAGTGTCGATAATTCACGTATAGACCGTAG
AACTGCAAAACCGCATTCATTTCTTTTTCGACGGATTTTCGTACAGCTTCAATTCCAAGC
ACTTGGAATATCTCACAAATGTCGTTACTAAAAGTTCTGATTGGATCCACATCACGCTCT
GAGAGCACTTTCATAAGAGATGTGCCGTCTGTTTCCAATAACCATTCTGCTATAGCTTTG
AACTCTCCCTGTTCAGTTATAGTTATACGTTTCTTAGCTTCTGTCTGTGGTAAATGCATA
TACACTTTTGCAATAGCCTCAATGCCTTGCAAAGTCATATCAGACAGCATGTTTGCTTCA
ATACATCTTAAGAACATGTCATCTTCCATTTTGTCTACTGTCTCTTCATCATGATCTTGG
AATTTACTTTCTTCATTATTCATGATTCTAATTCGCAAAACTAACTTTTCAGCATTGTCA
TCATTGAAGATACAATTGAGATCATCACCAAAACCAGCATTAATTTTCTCAGCAATCTGT
TCCATTGTTAATTTCTTGTCGGTCATTCTCTTACGGTCCAGTTCAATACGCAATAACCAA
GGCGAAATTTTCGCAGGATCAAAGTCAGGCATTTCGTAGTAAACATTGACAAATTCTTGG
TCCTCTGCAATAACAGTATTCTGAGGATCAGGGTCATAATAAATAGCCGTGTTAGCAGTA
ACTTTACGTAAAGTTGTATGTTCTAATCTACAGAGAACGTTTTTGGCTTTTTCGGCATCT
CTGGCTGCTCCACCGGTCAAAAATACAGTTAGAGAAGGAGCCTTTGGTTTCTTAGAAATG
TTGATGATTTCCTTCAGACGAGGCACACCAAGTGTTACATTTTTGGATGATACACCAGCA
AAATGGAAGGTATTCAATGTCATCTGAGTAGCTGGCTCACCAAGTGATTGAGCAGCTAAA
GCGCCTACCATTTCACCTGGATTTACTTGTGCTTGCTGGAATCTTGCCTCTATTTCCCCG
ATAAGCCATTCAAATGCTACACTAGATAATCTATGTTCTTCAGATACAAATTTTGTACAA
AGTGTTGATCTCACTAAGCATTGGAAAAGTAATGTAGCATTCTCATTGGCTTGCTTAGAC
AAACGATCATCACCAGCTACAATGACACACTTCTTTAGAAGGTCTGATACACCTTTTATA
ACTTTGATAGGGCTTAAGTCTGTTGGTATTCTCTTGTTTATGTGGAATGTTTTCTGAGCA
TTCCAAATCATTCTCTTGAAATTACATGGCAATACAACCTTAGATTCTCCCGTTGGGAAA
ATCTGACGTAATGTTTCTCTGTCTTTAGAAAGTTGTTCCCACTCACTTTCAAGGTCAGCT
ATGACACTTCCAGATTCTGTTAGCTCTCTGACTATGTCTTCACTGAAAATTCTCTTCAGA
TATCTCTCATTGGAAGAGTCAAATTTGAATTTCTTTTCAAATGCTTTATTTGACAATTTA
ACAGTCGGCAGGTTCTGGAATTCTACTGTCTCTCCTGCGAGACCGTCCTCACCATACCTC
AATTGAATAAGTTGTCCAACAGAGTTTCTAACTGTACCATCATAGTGGACCATTACAGAC
TCCATGGCTTTAATGAGACGCCGTTGAATGTATCCAGTTTCAGCAGTTTTTACAGCAGTA
TCAATTAAACCTTCACGTCCACCCATGGCGTGAAAATAGAATTCTGAAGGAGTCAGACCA
GCTAGATAAGAGTTTTCAACAAAACCTCTGGATTCAGGACCATAATCATCTTTAATAAAG
TGGGGTAAGGTGCGTTTTCTAAATCCAAATGGGATTCGTTTTCCTTCAACATTCTGTTGG
CCTACACAAGCAATGACTTGTGAAATATTAATGTTTGAACCTTTCGAGCCAGCAACTACC
ATAGCTTTGAGATTATTGTATTCTGTTAATGATTTCTTAGCAGATCCACCTGTTTTATCA
CGAGCATCATTGAGGATACGGTTCACTTGATTTTCAAAGGTCTGCCTTAGTGTATTACCA
GGTGTGGGTTCCAATTCCATATTGTGGGCTTTCTGAATGACTTCTATTACGTCATCTTTA
GCTTTTACGATTGCACGCTGAATTTCTTGATATGTCTGTGGATCAGCAATAGTGTCACCA
ATACCAATTGAGTGACCTTCCAACAGAAGCCAGTTATTAATGACAGTCTGAATGTTACCG
TAGAATCGTCCAGCAGTTTCATGGCCTAATTCCAACATGCAAATATGCAACAGAGAGCCA
GCAGATGCACCAAGCGACTTTTTACACAAAATACCCATTAGTAGTTCTCCATGTTCTACA
ACAACTTTGGTATCTCCTGGAGAAATCCACTTGTAAGGACCATCATCTTCTTCATCAGGA
TGAGTAGAGTGAGTTCGAATCATATTAACAGGACCAGGTATTATTAAAGTGAATATTTGT
TTACCTGTCCATAAAGGCTGTGGTTTCAAAATGCAAGGTTGAGGAATTTTACCATCCCAT
GTAGGTAAAAACATAAGAAGATTCATTACTTGTTCTTTTGTTAAAAAAACATCTCTCTTA
GTCATTTTTCTAACGGCAGTCAATGTGTCCTGCACAATACCCATTACAGGTTTATTAGCC
TGTGGAGTTATAATTTGTCTAGGTGTTATATGAATATTTTCAACTTCAGCCCTTGTTTCC
ATTGATTGAGGAACATGCAAATTCATTTCATCTCCATCAAAATCAGCATTGTAAGGTGAT
GTGCAACTCAAATTCATACGAAACGTTGACCAAGGAAGTACCTTAACTCTGTGACCCATC
ATACTCATTTTGTGAAGAGTTGGTTGACGATTAAATATAACAAGGTCATCATCTCTTAGA
TGTCTTTCTACTTTGTAACCATAGAGTAAATGTAAATCTGAAGATTTAGGATGGAATCTT
AAATCAATTCTTTCTCCGTTTTCTCTTACAATGTACTTTGCCCCAGGGTATTGTGCATTT
CCTCTTCGGACAAGTTCTTGCATTCTATCAAGATTAAATGGAGTCACCAACTCTGGGAAT
GTCATATTTTGAGCAATTGATCTGGGAACCCCAACTTGATCTATACGTAAATTTGGATCA
GGTGTGATTACTGTCCTAGCTGAGAAGTCAACACGTTTCCCCATTAGATTTCCTCGAATT
CTTCCTTCTTTTCCTTTCAATCTGGCTTTGAGAGCCTTTAAGGGCTTCCCAGATTTCTGC
ATAGCTTTTGGCATACCAGGCATGTCATTGTCAACAAAAGTAGCAACATGAAATTGTAAC
ATTCTTATATTCTCTGCAAGGACATGAGCAGCAGCTCCAGACTGCTCATTTTTTTCCAAG
TCATTGTTAGCTTTTATTATATCAGCTAGCTTGTGGGTTAAGTCATCTTGATTTTTGGCA
GAGCCAAACATAACAACAGCTGGACGAACACACAATGGAGGGACAGGCAAAACCGTCACA
ATCATCCAATCTGGTCTTGCAAAATTTGGATCCATACCCAAAATAAATGAATCTTCATCT
GTTATATGTTTCAAAATTTCCCATACTCTTTCTGCAGAGACAAAAATTTTCTTTTCTTGT
GTATCTTCATTAGCATGTTTCCACTCAGCTGTGAGCTCTAGACCTTGTCGTCTAATAGAG
GGTTGATAATGCCCACAACCACCATGACCAGATCCTCTTTTACCTTCTTCACCTTCTTTC
CCAATATCCATGTCTTCACCACCTTCACATATATTTTTTCCTTTGCACAGATCATAAACA
TAGGTCAACCGTTTGCGGGGTTGGCCCTTGGATTTCATTATAACTTCTTTTATCTTTGGA
TTTGTAGGGCTGACAAGCAGCTTTGAACAATAAAAGCATACACATCTGAGTATTTTTATT
GTTTTTGTTATGAAACCAATATGGAAAACTGGTTTAGCTAAATCAATGTGCCCAAAGTGT
CCTGGACATTCTGTCATATTCCCAGCACACGTTTGACACCGTGAGCTTCTGTCAATTACC
CCTTGTCGAGGATCCAT
(5357 bp)

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