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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40669_c0_seq1
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		PREDICTED:_GATA-binding_factor_C-like_isoform_X3_[Bombyx_mori]
Ontology
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001085 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0007507 P heart development
GO:0008045 P motor neuron axon guidance
GO:0008270 F zinc ion binding
GO:0009887 P animal organ morphogenesis
GO:0009888 P tissue development
GO:0043565 F sequence-specific DNA binding
GO:0045165 P cell fate commitment
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048565 P digestive tract development
GO:0048646 P anatomical structure formation involved in morphogenesis
Transcript
Level		FPKM:17.22 TPM:13.61
ORF EntryO_BomoMG20029_complete:A_BomoMG_comp40669_c0_seq1
Sequence
(Nucleotide)
GCGGTGTCGTCGGTTGTGATAGATCACAGAGACTGTACTGGTTTCATCACTATATTATCA
CGAGATCATCACGCAGGAGATTTCGTATTATTATCGTCTGGTACGAACAATATGAACTCG
CTTCGTAGTACAAAAGCAACGTGAGGCTGGTTTGAAAGTAAATCCGTGCAACATGCTAAG
ACTGAGCTCGATCGCTTTCGTCTAGTGATTGAGCGAACCCGGACTGAACTATTGACTGCT
GGAGATGCGGATAGGAGAGTGGACTTACAGTGCGTGTGTATAAAAGCGATGCATGGTGTG
TGAGATCGGTGCCGCGGTCATGGACATGAGCGGAGAGGGCGGCGGCGCGGGGGCGAGCGC
GCTGCAGCAGCGGTGGTACGAGAGCCGCCTTAACGGCAGCCCTGCCGCCGGCGACGTCAA
CGCGGAGACCAATGGAGACGGCTTCTTCCATTCTCCGCTCGAAGGGGGCCACCATAGCCG
CGCCCGCTACTACCATCAGCAGATGCACGCCCCCTACTCGGCCGCTGTCGGTTCGCATGG
TCGAACGTTAAGCGGTAGCAGTGGGCAGGTGTGTCGGCCTCACTTCCATACGCCTCTGCA
TCCTTGGCTCGAGTCTAAGGCGCTGGGGAGCGGGGCGTGGGGAGGAGGCTTCCAACAAGA
TGGTTCCTCGGGCGACAAACCGCTGTCACCAGCACAACACCCTCATCCCCATCCTTTGTT
TTCATTTCCTCCGACTCCTCCGAAAGACTCGACGCCGGACTCTGTGGCTGCGGCGGCTCT
CGGTCAACAGGACTACCAGGCCGCGGTAGCGCATGCCACAGCGATGAGCGTCGCCTTCAT
GCAGCAACAACAAGAGCTGCCCCTCTGCGGAGACGTCAAACCAATGATGGGCGCGCCGCC
TTCCAAACAGCGCGAAGGTGCGCAACCGGACTCTTGCGCCCAGGACACGAGTCAACCCTC
CGGGGAATACAACGCTCAGTACAATGCCGCCGGCGGCGACTACTACAACTATCAGGGGAA
AGGTTATAGCGGAGCGCAGCAGCAGAACAAGCCGCGACCGAACAAGACGCGAACTAGCGC
CGAGGGTCGAGAGTGCGTCAACTGTGGGGCGACGAGCACTCCGCTGTGGCGACGAGACGG
CACCGGACACTACCTCTGCAACGCCTGCGGTCTCTACTACAAGATGAACGGACAAAACCG
ACCATTGATCAAGCCTAAACGAAGATTGTCGTTACAAAGTGCGGCCCGACGGGCGGGAAC
CTCGTGTGCGAACTGTAAGACGACCACAACGACATTATGGAGGAGAAACCAGAACGGAGA
ACCTGTATGCAACGCTTGCGGACTCTACTACAAGCTACACAACGTAAACCGACCTTTGAC
GATGAAGAAGGAAGGTATCCAGACAAGAAATAGGAAGTTAAGCAGTAAAAGTAAGAAGAA
GAAGGGAGGAATGGGAATGGGCGGTGGGGGAGCTTGTGCTTTAGCGCTCGGCGGAGTCAT
GGGAGACATGATAAAGCCTCTCGGAGACGCTACCAAAGGATTCGGAGGCTCAGCCTTCCC
GTCAGCTATGGATTTCGGTCAGCACCAAGTGGGCTTAGTCCACCCGGCGGCCGCGCACAT
GTCCCACTGGTACGGAGCGCCCCATCAGGGTTTCGCCCCACCACCGACCTCCCACAACCC
TTACCATCACCATCACCTTGCGCAGCTCAATTCTATGACGGGTTGGAGGAGTGAATACAC
GTGATAAGTCAGCCAACTTGAGGACCTAGTAATCGGATAAGAATATTTGTATCTCTCGTG
ATAATTTACACGTCTTAGCCGTCCTAGTCACATGGGATGATCACATGATGGGATGAAAGC
ATGCCCCATGAAGAAATCCGAGGAAACCTTAGAAACAGACGCTGTGATTTCAAACGATTT
ACAGACTAATCTATAAAAGGATAAGATTTATTTTAAAACATCACATTTTAATGAGACTGC
AAACTGAATTGACGTTTGTAAAATTTTACAAAAAATAATAAAATAATATGCAGAATTGTT
TGAACATATCTGATTCTGAATACTTATGTCCCATTGTAAACCCCAAATGAGACTTTATTA
TTCCGCGTTCAGTTTCCTTCAAGTATTATTAATTAGTTCACATCTGTCGTATAAAATAGA
ACAATGACATCACAGTAGATAAGTAATGCTATTTACGGAATTGTTTTTAGAAAATATTGA
TCGATCAGTAGATTAGGAAGAAAGAGTCTTTATTAGTTTATCAAATTAGTGGAAAAGGAA
AAAGAACATTTTAACATAAATCGTCAGACCCATTTTAACATATGTGTTGATTGAAATCGG
AGATGGTATAACATAAATGGGAACAGTGAGAACGGGATAGCAATGAACAATGAATTTTAT
AATTTTTCTAGAACGTATACAGGTAAAATTAAAGTATCGATAACATGGCGAACATTTTTC
AATTAGTTTTCACTTTATATGAGAGATGTGAACTAACATAATTTGAAAAGTTAAGAACGA
TTTTACATGAAGTAACTATACTAGCGAAATTGTACAGTATTATAATATTAGCTAAGGTCG
GTCACGAAGTCGGCTTATACGATAAGGTAATAAGTATAGTTCAAAAACATTATTTGTGTA
TTTTGTAAATAAATTAAGTTACAAATTCTGTTCCTTTGTAAATTGCGTTTAATTATTATT
TTTTATTAAATATTATTTAATTTTGTCGGATTGTATCGCTGTAAACGTTGCGATGTGTTC
AGAGAATACGAGAAAAGATTGTCTTTTTTTGTAAATTTATTTCTGTAAATGTTATCGAAC
GAATGCAATAGTAATTTATGTAATAGATAATAAAACGTTGTATTTGTAAATATTTACAGT
TTTGAATTGAGAATTAATTTTGAACGATTTCAAGAGAAGCCGGTGACTATAATTGTACAC
TTTATTTTGTATAATATTAATATGTTGATTTGAGAAAAGAATTGTATGAAACAAACATAT
GTATAACAACTATCTATGCCGTTGTAAAATTTTAAGATATCGAGTGGCCATACATTAAGA
GGTGTCATTTTTATCAAAATATAATGAATTTTGTTTAATTTATTTTCCATTTGCAACTAA
AAAAATATTATTGAAGAACTAATGAATAAATTCTTAAAAAAAATATTCGCTATATAAGTA
CTTCATTGTGATTTTGATAAACAAGGCATTTGAACCCCAAAAAATGTAAATATGAAAGTG
TAAATTAAACAGTAGACGATAAATTAAAATGTTTATTAAAATAATTAAAAAGACGTGTAC
ATTAGAAATCGCCACAAACAGCCTTTATTTACGATATCCCTTACCTAAAGTTTTTAGTTT
ATAAAACAAAACATTCTGAAGTTGTGTATTTTAAATGAAGTTGTAAATAAATTATCAATA
TTGATTTGAAAAAAAA
(3436 bp)

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