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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40630_c1_seq6
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_lipophorin_receptor_isoform_X3_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001948 F protein binding
GO:0005509 F calcium ion binding
GO:0005615 C extracellular space
GO:0005905 C clathrin-coated pit
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0021517 P ventral spinal cord development
GO:0030229 F very-low-density lipoprotein particle receptor activity
GO:0034185 F apolipoprotein binding
GO:0034189 F very-low-density lipoprotein particle binding
GO:0034361 C very-low-density lipoprotein particle
GO:0034436 P glycoprotein transport
GO:0034437 F obsolete glycoprotein transmembrane transporter activity
GO:0034447 P very-low-density lipoprotein particle clearance
GO:0038025 F reelin receptor activity
GO:0038026 P reelin-mediated signaling pathway
GO:0043235 C receptor complex
GO:0045860 P positive regulation of protein kinase activity
GO:0048306 F calcium-dependent protein binding
GO:0048813 P dendrite morphogenesis
GO:1900006 P positive regulation of dendrite development
Transcript
Level		FPKM:6.07 TPM:4.80
ORF EntryO_BomoMG19612_5prime_partial:A_BomoMG_comp40630_c1_seq6
Sequence
(Nucleotide)
TAGACGAATGCGCGGACCCTGGATCTTGCTCACAAATATGCATTAACGAAAAAGGCACCT
TCAAATGCGAATGTCATACCGGCTACGCCAGAGACCCTCGTGACAGAACCAGGTGCAAAG
CAACGGAGGGGCACCCATCATTACTGTTCGCAAGAAAACACGACATTCGTAAGATAAGCC
TGGACCATCATGAAATGGTGGCGATTGTGAACGACACAAAATCAGCAACGGCACTCGACT
ATGTCTTCAGAACCGGAATGATCTTTTGGAGCGATGTCAATGACGAGAAGATTTACAAAG
CACCAATTGATGAAGGCACTCAACGTACAGTCGTCATCGGTGAACAGCTGATTACATCCG
ACGGCCTCGCAGTCGACTGGGTCTATAATCATCTGTATTGGACCGACACCGGGCACAACC
ACATCGAGCTCTCCGATTTACAAGGGAACATGAGAAAAATACTGATCAGAGATCGCCTGG
AAGAACCACGTGCAATTGCACTGAATCCTTTAGAAGGTTGGATGTTCTGGACCGACTGGG
GTCAAGTGCCGAAGATCGAACGTGCTGGCATGGACGGTTCACATCGGAGCACCATTGTGT
CTTACGACGTAAAATGGCCCAACGGTCTGACTCTGGACCTTGTACGCCAACGAGTTTACT
GGGTGGATGCGAAAATGAATACAATCTCATCGTGCAACTACGACGGGTCCGGGCGCCGGC
TCATTCTCCATTCGACCGAAGTGTTGAGACACCCGTTCTCGATAACCACATTCGAAGACT
GGGTCTACTGGACTGATTGGGACAAGACAGCCGTGTACCGAGCGAATAAATTCAACGGTA
AAGACGTGGAAGCAATCACATCTACACACACGCTCCAAAACCCGATGGTGATTCACGTGT
ATCACCCGTACCGGCAACCCGATGGTGTGAATCACTGCGCTGCTGTCAACGGTCACTGCT
CTCACCTGTGCCTGCCCGCCCCGAGGTTCGGTCCCAACTCGCCTCGCGTGTCCTGCGCCT
GTCCCAATGGGTTAAAGCTCCTGCCTGATGACCAGATGTGCGTCGAAGACAATGCAATAA
AAGGAGATGCAGAGTTACATAAAACGAGTAACAGTTCAAATGGAACAGTAGTTGAGAAAA
AACCTATAAGCAGTGTACCAGAAACACCAAAAGTCGGAACAGAAATCTCAAACAGCGGTC
GCGATGCCGGAGTGGTCGCCGGTATCGTGGTAGCAGTGATATCTGGAGTTTTATTATTGG
CTGCAGTGATCGCAGGTGTTATGTACAGACACTACGTACATCATAACGTTACATCGATGA
ACTTCGACAACCCGGTCTACCGTAAGACAACAGAAGACCAATTCGCTTTGGAGAAAAATG
GCTACGCACCGGGAAGCAAGCTGTACCCGAGCACCGTGGGGGAAGAGGCCCAAGAACCAC
TCAATAAGCCGAATACAGAATTCGTATAGTGTCCGTGTCGGCAGTAAATACGTTTCAATA
TCATTGAATGTGAAAAGAAAAAGAAGGAGATGTGATACATGACGTGAATAGTTCTAACCA
GTGAACGGGACTAAGCTACTGTAGTGTACTCTAGATGGCGTTAGTGCAGTGTTAAGTGTA
ACGCTTCGGAACAAAGTTCTTTTCGCGCTCTTTCATACGTCAAGCCGAGGAGGGATCTCA
TTTAAGGTTATATTTGGTTTGCTATCATGTCTTGTAATGAATATAAATCACGGGGAGGCT
ATTGTATCACACGTTCGCTTAGAGAAGATCGGTTTTTCCTATAAGTAAAATTTCTCATTA
GACTGAATAGTATAGAGATTTTTTAAAATATTTAATTATTTAACGAAATTACGCTTTAAT
GGCGAACTGTTCCATCACTTTTCAGCTTTGTTGTTAATTTACTATACATATTTTATTTTA
GTTAGATATTATGATCACGTAGTAATGTCGTGCTTCGAACAAATAAAATGTTTTTGTATT
AGAAAATAGAAAAATATATTAATTTAAAATCCTTTTTGTTTTGTAAAAGATACAAATGTA
CTGATTATACAACTTTCAAAGTATAACATTAGGAAAAATATTAAGTCTCTCCTGTAGATT
TTTTAACATAAATTGTAATTATTTATTGGAATTAATATGAAATATAGACTAATGATTACG
GTAGTCTACAATTTTTGTGCCAATCCCTGATACACACTGTGTAATTAAATTAATTTCATT
AGATAAATTTTATTATCAATTTAAATGTTTGTTATCTAATATTTATTTGTAAAACAATTG
TTATTTATTACAGTTTAACGTAATATATAAAATATTTTATGTAAAAGTTGTTTTTGAATC
ACACGTTCGTGCTATGTGATTTGAAAATAGGAAGGAAATTTGGAATTTGTATTTGTCAAG
CGAAATCCTGCCAAATGCCGTAAATAAGTTTATAAAAACATAATTACTCTTTACATAATT
AATGTAATTCAATTACATTGTAAT
(2484 bp)

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