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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40627_c0_seq3
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		PREDICTED:_steroid_hormone_receptor_ERR1_isoform_X1_[Amyelois_transitella]
Ontology
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001892 P embryonic placenta development
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003707 F steroid hormone receptor activity
GO:0003713 F transcription coactivator activity
GO:0004879 F nuclear receptor activity
GO:0005496 F steroid binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0008134 F transcription factor binding
GO:0008270 F zinc ion binding
GO:0030522 P intracellular receptor signaling pathway
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
Transcript
Level		FPKM:2.57 TPM:2.03
ORF EntryO_BomoMG19514_complete:A_BomoMG_comp40627_c0_seq3
Sequence
(Nucleotide)
GGGGACTCGTGTACTGAACGTCGCGACGCGCAGTACTTTCGCGCCAGATCACCTGAACTT
TTCAAATAATCTAGACATATAAAAACAAGCCGAGATGGACTGGATGGAGATGGAGGATAT
GGTGCACATGATGTCCGCAGTCAGTGGGGAGCCCATGCTACGCCGCGTCAAACAGGAAAC
GGATCCGTCGCCGCAGTACTCGCCCCCCGAGCCGCAGCCCCCACACCCCCAGCCGCTGCA
CCCCCGACCGATGCCCTTGATGCAGCCGGAGGTACCTATGCCTCTCCAACAGTTGGAACT
CGAGACTAAGGACGTGAAGTTCTGCGTTTCGCCCGAGGACGGCACGATCGTGGGCAACAC
CAGCCCTGAGCAGCAGCACTGTTCGTCGACAACCGCGGCCGCCGCCAGCGGCAACCGGGA
CGAGGACACGCCGCGCAGGCGGTGCCTCGTCTGCGGGGACGTCGCCTCCGGCTTCCACTA
CGGAGTAGCCAGCTGCGAGGCTTGCAAGGCGTTCTTCAAGAGGACCATACAGGGCAACAT
CGACTACACTTGTCCGGCGGCGAATGAGTGCGAGATCAACAAGCGGCGGCGCAAGGCGTG
CCAGGCGTGCCGCTTCCGCAAGTGCTTGCGCACCGGGATGCTGCGCGAGGGCGTGCGCCT
GGACCGCGTGCGCGGCGGCCGCCAGAAGTACCGCCGCGCGCCCGAGCAGGCCCAGCCCAG
GGTGCAGCTCGACGACATCAAGGTGCTGGAGGCGCTGCTCTCGTACGAGCCGGAGCCGTT
CGCGTGCTCGGCGGCGCCCCCCGGCGTGACGGAGCCGGCCGCGCGGACGCTGGCGCTGCT
CGCCGACCTGTACGACCGGGAGCTGGTCGAGATCATCGGCTGGGCCAAGCAGATACCCGG
CTTCACGGACCTGCAGCTCAACGATCAGATGCGCTTGTTACAAAGCACTTGGGCCGAGAT
GCTGAGTCTCATGGTGGCGTACCGCTCGATGTCCAGCGGCGCCAACCTCAAGCTGCGGTT
CGCTTCGGACCTCACGCTGGACGAGCAGGAGGCCCGCGACATCGGGGCCACCGATCTGTT
TCTACAGGTGTCGGGCGTGGTGCGGCGGCTGGAGCGCGCGGGCGCCGTGCGCGAGGAGTG
CGTGCTGCTGAAGGCGCTGGTGCTGGCCAACTCGGAGGCGCGCCTCGACGAGCACCTCAC
GCTGCGCCGCTTCCGCGAGCAGATCCTGCAGGCGCTCAACGAGGCCGTCGCCGTGCTGCG
GCCGTACGGCGCCAACCCCGCGCTGCAGCAGCTGCTGCTGGTGCTGCCGGCGCTGCGCCA
CGCGGACGTGGCCGTGCGCCGCTTCTGGGCCGCCGTGCACCGCGACCGCCGCGCGCCCAT
GAACAAGCTCTTCGTCGAGATGCTCGAGGCCTGTCTGCGGTAAGCCGAGCCCGACCTCCG
TGCGCGACGACTGTTAATCATCAATGCTCCGCGCCTGCCGACCGTCTATATAACACACCC
GGGAGCCACATAAGCAAACAGGCGGAATCCTAAAACGCTATCAACAACTCGTTGATATTA
ATAAATTACAATTAATCACTTGAATAAACATTATCAGAGGTTTTTTTTTGGAGGTAACCG
CTATAAATATCTCTTATTATTGACATTCAAATTGATGAGTAACAGTTGTTTGTTTAACGA
ACGGTTCGATGGCACGGTCCTCCCAGTCAGCGCCGGGCCGCGACGCGGAAGCGATACAAA
CGTCATCACAAATCCACATATCACGCGACGCGTTCGCCCCTCCCCCTTTTCCCCCGCCCC
CAATCCTTTAGTTCGCATTTAACCCCATCCCGTCCCCCCTCGGTCCCGCCCGATACCGAT
CCCTTTAAGGCTCGTTTACACAAGGCGAAACCGAAGCTCGTCGAGTTCGTTTGAACCAAG
CAGGAATGCGGAGGAAGGGGCCTTGTGTAAATCCGCCGTTAGTCTGTAGTTTATGGCTGT
GATGTGTACGTAGTGCTGTGACGTCACGGGCGGCCGCGGGCCCGGCGTCGTCGATGTACA
AAATGATGGACGATACTAGTACAAAAAAAAAAACTTGTTACTATTTTTGTATAATATTAA
AAAATATATTTCTAGATTTTAGTGTGCGAATCTACGAGATTATTGCGTTGTATGGTCGCG
GGGATAATGTACCTTTGAGTTGGTGTTTACTGTTTGTTGATTAAACATGAACAAATGAAA
AAAAAAAAAAATTATATTGTATTAGAATTGATATCTTGTACAAATTGAAAGGTTTATTAA
GTAAAGATTTTTCTATTGTCAAAAAATAAAAAATATCTAGGTTGTTATTTGAAATGATTT
TGGTGCTCTCAATAAAAAAAAAAAAAACTTATCGTATGTAACCTATCTATGATTTTGGAA
TCAAACGTTACTCGAGTCGATAGAATTGTGCGACAAGTCTAGACTTCGTGAATGCTTTAA
AAGTTTTAGCCTAAATATTTCAGAACTTAGTTCCGTTCTCCTCATAGTGTAAAGGTTGCG
TTCTTTCAACTAGATAAAGGTTATTTTTAAACGATTATTTTTAATCGATTAAACCTCCGG
CCAATGTTGAGTAATAAAAGATTATTGACAGAACATCATAAATTTATATATGTTTAAATG
TATATTAAGGCGGGATTATTGTTAGTGAAATGATACCTTAACTACATCATTGTATAATTT
AATAATAAAATGTGTTGCTGAATTTAGTACAAAATCGATTGAAAATATCGATATTTATAT
TTAAGAATCGATATTGTTTCCCCGACCGTACTCAGCAGGATTTGATTTCTCGTCATGGGC
CGTATTCGGCGCATTTATGTTACAGCGTTTTTTCTTGTTTTTTTTTTCAAATACATGATG
TACATCTTCTAACATGCTCTATCGGAAACATGGCAACGTCACTATCGAAAACTTGCATAT
ATCGATAAAAATCATCGACTTAGTTTGCATCAAATAAAACGAATGATAGCAAGGAATAGA
TGATTTAAAGTTAGTAGCTTTTTTTTTTAATTACTATTCTTAACTTCAAAGTAGCACAAA
AGATTAAAACAATAAAAAAATACAAACCAAACTTTGAGCCGAAACAATTAAAATTCTCTA
TCGATCGAATTAATTGGGAATTGCAATTTTGTAAGGTTAGACTTGGTCATTCTCAAAATT
TAAAAGTAAAAATCAAGACTTTGGTTATTGCAATAAACAACATATTGACATTGCCACAAG
TTCCGCTGTCAGTCAAAATGTTAAATTCGAAATCTAATTAGTCTATATATTTCGTATCGC
TGTTCCGCTAATCTGTAAAATAAATTTATTGACGGAGTAATTTATATTATTGTAAAGATG
GTACAAAAGAAAAAAGCTAAAAAAATAAAACAATAATGCTGTTTAAAAATGCTAAATTTA
AATTTTATATACATATTTATTTAAAAACTGAGTGTTGTGTTAGTGGGACAGTATTTATGT
AGAATATTTCTTAATTAGGTTTTATAATCGCTGAGGAACACACGTATGATAATAATAGTA
TATTAACCTATACATATAAATAAAATTGGAG
(3571 bp)

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