SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40617_c0_seq4
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		PREDICTED:_ceramide_synthase_6-like_isoform_X1_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030148 P sphingolipid biosynthetic process
GO:0031965 C nuclear membrane
GO:0046513 P ceramide biosynthetic process
GO:0050291 F sphingosine N-acyltransferase activity
Transcript
Level		FPKM:8.77 TPM:6.93
ORF EntryO_BomoMG19465_5prime_partial:A_BomoMG_comp40617_c0_seq4
Sequence
(Nucleotide)
GTAAAGTGGACGGTTGTGTCGTTATTTATTTTGAAAATCTTCATGGCGTGATAAATAATT
CATTATTAGTGCATTGCAGTGGTGGCTCCTCACCGCTGATATTTAACAACCTCATGAATA
CGTTACGATTATTATTAGACACGTTTTGGGATGAATCTGTTTGGTTGCCTCCTAATACTA
CATGGGAAGATCTGGAGCCGGGTCCTGACAAAGTCGTGATTTACAATGACTACCGGCATC
TTTTTTATCCGTTGCCGCTGGCGTTGGTGCTTATAGTATTACGGCATGTACTGGAGAAGT
ACTGGTTTGCACCGTTTGGAAAATCAATAGGTATTAAAAATACCAGACCAAAGAAAGCAC
CTAACAATCCTAAATTAGAAAATGCATATCAAGCATCGTCCAAACTGAAACATAAACAGA
TATGTGCACTGGCGAAGCAAGTGGACTTATCGGAGAGACAGGTGGAAAGATGGTGGCGTT
TACGTCGCAGCCAAGACAAGCCCTCCACCCTGGTCAAGTTCTGCGAGAACTGTTGGAGAT
GCAGCTTCTATTTGTACAACTTCTCGTACGGTATGTTCATACTATGGGAGAAAACTTGGC
TGTGGGATATCGACCAGTGCTACATTGGCTATCCCCATCAGGGCGTGACCGGTGACGTGT
GGTGGTACTACATGATATCGTCCGCCTTCTATTGGTCGCTGACCATCTCGCAGTTCTGGG
ACGTCAAGCGCAAGGACTTCTGGCAGATGTTCGTCCACCACATCGCCACCATAGCGCTGC
TCTCGTTCAGCTGGGTCTGCAACCTGCACCGGATCGGAACCCTGGTTCTGCTGACGCACG
ACTGCGCGGACATATTCTTGGAGGCGGCCAAGGCCACGAAATACGCGAGCTACCAGAAGC
TATGCGATTTCCTTTTCACGATCTTCACTCTGTTATGGATAGTGACGAGGAATGGTATTT
ATCCGTTCTATATTATTTGGAGCACGTCAATCCGAGCACCGATGTTGCTTCCAATGTTCC
CTGCCTATTACATATTCAATTCCCTGCTCTGTTTGCTGTTGGCCCTGCACATGGTTTGGA
CCTGGCTCATAGTTCAAGTCGCCTACAAGTCCATAAGCGCCGGGCAGATGGAAGGCGACA
TTAGAAGCTCCAGTTCGGATATCAGTGACAGCTCTCATCATTCAAACCACAGCACGCCCA
ATCGCGTTCGAAGTAAAAAAGACGCGTAAGGTCACTTCATGTGTATTGGGGTAGATGAGG
GGGAGGGGGGTGACTCTGTCCCTAGCACCGGACTCATCACTCCAAGGGTCATGACGTCAC
AGTATCCTCAGGTGTTCAGACAAAACGTCCGGATTACTCTGCACAGACAACTCTTTGCGT
CCTTAATTTACGTATATAGATATCGATGGGTGAAAGACTATTTATCTTTAGGCGACATTT
TTGTAAACATTACAGGAGAGTCATTTAAAGTTTA
(1474 bp)

- SilkBase 1999-2023 -