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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40615_c0_seq1
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_HECTD1_isoform_X2_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0010091 P trichome branching
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042023 P DNA endoreduplication
GO:0042787 P ubiquitin-dependent protein catabolic process
Transcript
Level		FPKM:11.95 TPM:9.44
ORF EntryO_BomoMG19456_5prime_partial:A_BomoMG_comp40615_c0_seq1
Sequence
(Nucleotide)
ACAATCTTCAACAATTACAAGAACGCTACAATTTGTTATGTAATGTTAATCATTAAATTC
TAAATATCTATTAAATTTAAACTTAATACATTTTAATTGATAAAATATTTCTAGAATAAA
TCACAATAGTATATCAACTTTCAGTTGACAAAATAATATGATTGAAATAAAGGAACACAG
CTAATCAGTTAAATTTCATAAACACGCGATATTATTAGTGTTTCACACCTTAACGTCGGA
GACCCTTACAAGCATTGATTAATGCGACACTCGAGTCTCCTGTTCTTTTTGGTCTAAATA
TCATCAATATGATTTCATCAAATCCACTGTAGATCAATATATGTACAAATACAGAATGAC
CGCATCAGGCGCTTAATGTGTTATTCATTTACAAAAAAACACCAAATTGTATCATATTGG
TAGAGTTAAAGGGGATACTTTTTAAATTAATCTATAGTTGTCGAAACGCAAAAGCTTACA
AAATGAAATTTGACTTTTCTAAATGGGTTTTTATACATTCTACTTCATATAATCAGTTTT
TAATGAGATCTAAAATTAAAATAAATTTAAAATACGTCCAGATATGAAAAGTTAGAAATT
TGAAACCAAATAACATAAAACGTTTCATGTCATTACTGCTACTCTCTTCCTTTCATCTTT
AAAACATTAATATTTGTCATTTTACAACATTTTTTCACCATTACTTATTTTCATGGATAT
TTCTTGCCTATAAAATTCAATCAAAAATAACAAACATTCCTACACAAAGGAACATTTCAT
GGTTTTATTTACTTAATTTAAAACGTATGACTTAATAGCTGTTTTTTTTTTATTATTTAA
AAAACTGTAAGACCTTATATTGGTTCTTGTATGTTTGTATATTAATCAAGAGCTCCAGAG
CTATTAGCTGTCAAAATATCGTTTTAAATTACAAAGTGCTCTAGTTCTTCTATCAATCTT
GATTATTTATTAAACTAGGCGCTGTCTGATAGCTAGATGCAATGAGTTTCGCATCTGCTT
GAAGGCTGAAAGCATTTATGGAAAGTTGCAAATCGTATTACCATACATATCTGATGGTAT
CGTATTAATTTTCGATTTTTTTATAATACATCAATCATAATACTATTTTTATTTTTTTAG
ACTGAGTTTCTAAAATGTTTATATTTTATTGGGGACAGAATACTTTTCGGAATTATGTAC
CGGTCGTATCTCACCTATAGCATTATTGTAATACTAGAATTTGTTATTGATTATACAGCG
CCTCCATGAAAATTAAACGAAGATTAGAATTTAAGCACGATCAATAAATTTACTTATTAA
CTAAATCTACGCCTAGATATTATTTATTTTAGATAATTGGTGTTTCCGATTTACTAACAC
GAATTTAATGATAGTAAACAACTTTCATTTAAATACATACTATTTCCAGAATCGATATAT
TGAAAACATTTCTTGTAGGCATGTTACAAATTGTTGTTAATTAAATTGAATTTTACTCAT
TTAATCAATTCAATCTTTAGTCATCTTACTCACATATTTGTGTATTTTAATTTGGATAAA
ATGTAATAGCAGCTTAATTTAAAGAATTTGAACTATTAAATACAATTGTATTATATTCAA
GCACATTATTTCAGTAAGAGTAACAAAACGGGACAGCTTTGAATTAATTTTCGACATTAC
TTAAAAATCAAGAGTATATAAAGGCAAAGTGCAGCATTGATGCGTGTAAATGTTCAAATA
TAGTTACAATATATTTTGATATAAACACGATTATATTATTAGGAATTAATTTAAATGAAA
GCCGCGCTCGTTGGTCGCGGCCAGCAAACGTTCGCGTAGCACTTCCTTACACGAATACTC
GGGCAACTTCAGGTAGTGCACGCAGGTGTTCACTGAAGGGTACGATCCATCTCCGGCGTC
GACCTTCCGTACGACCGTGAGTCGAGGATGCAGGTTGGCGAGTCCGCCGGGCGGCAGGCT
GCTGCATCCCGTCGCGAACTGCAGGAATGCTTTACGCTCGCAGATCGACATCTCAACCAG
AACGTCAACCAGACGAAGGAATCCCGGACTATCTCTGGTGTATCCGAGTTTAGGCTCGGT
ATACTGCAGCAGATGTTCCCTGGTCCAGACGGGGCCGCGTTCCCCGCAGAGCAGCAGGCG
CAGCTCGGAAGGAGAGAAGGCCCGCAGGCGTCGCGGCGGGAACACGCGTGCGAACCCGCG
CTTGAACCACGCCACCTGGCGCCGCACGCCCGCCGACACCATCCAGCGCGCGCTCCACTC
CGCGTACAGACGAGCGTTGTGCGCGCCCACCTCGATATGTTCTCCGCCATCACAGAGCGG
TTGCACGGCGACAGCGGGGTCGACGTTGGGTGCGATGTGCGTCATAGTTAAAGACAATTC
TTCAAAAGCGGCGCCGTCTACATTTAACTCACTGACACGTTTCTGCTTCTCGTTCTCGTC
CAAGGATTCATCACGCATTATTTTGTCGTACCCCTCGGCTGCTTCGAGCATCTTCTCTAA
GAATCTATGTCTAATGGGATCGATTTCTTGTAAATTCTCTTTCGTTAACTCTTCACCACA
CATTATACGTAAGAACGGCTCTGACAGAGGCAAGTCAACTAGTCGGCCGTCTTGTAATAC
CTTAGCTAAAAATACTCCTAAAAACCAGAAATATTTGCACACTTTATCACAGATAGGGGA
TTCTTGCGGAAGTGGAGCCGGAAACAGGCCACCGGGCCGGCTCACGTAGTAACCGGGTGG
CTTTTCTGTGGGCTGCATGAGGTGCAGCGGCGCGTCGTCATCGACGTGCAGCGGCGCGTC
GTGCAGCCACAGGGCGAGGTCGGCGCGCTGCAGCTCGGCCGCCACCAGCGCGTAGAACTC
CAGCGTGGGCCCGAGACCAGTGCCCTCCTCGCCCGCGAATTCCACCTCTAATACAGACTT
GCGACTCGCGTGCACTCGCATCACCTGAATAGCAGAACGCAGCATGTCGGGATCTCTCGG
AATCCGAACGCGCTCGTGTCTGAGGCGACCCATGCGGAATTCAGTCGCTTCCAGCTCCGC
TCGGCGCGGTGACACCGTGTTGGTCGCTCTCTGTCTGTCCAAAGCACGGTCACGTTGCGC
TTGCAGCCAGACGATGGTCCGGGACGTTCCAAACGCGGTGCATGCGAAAAACATTTGTCT
TGTTTCGAGTGGAAACAGAAATGGACACCAATCGATCAGTTGCTGACACCAATGCGGAGT
GGCGGCGGCGGCGAGCGCGAGCGGCTCCTGCAGCTGGAGATGCAGCTTGTTGGTGAGCTT
GGTGGAGAGGAAGGGCTCGGCGGGCAGCTCGGGCGCGGCCGCTCGCAGGCGCCGCAGCAC
GCGCACGCAGCTCGTGGCCATGCCGCCCTCGCTCCCCTCTGCACCCACTATACCGCCTTC
TGGATCATTAGGTTCATCATCTTCAGTGTCACTCGAAGCAAATGCGCCCTCTGAACCCTC
CACCTCCTTGTATGTTAAAGTGTATGTGGTATCTCGATGGAGGTCTGCGTGCGGCAGGCG
GGCGTGCAGCAGCAGCACGGCGCGGTACAGCGTCCAGGAGCCGCGCGCCAGCGGCAGCGA
GGCCCCGCCCGCGCTCAGTACCAGGCGCAGCGCCGGGGCGCGACCGGTCTCGCTAGTCGC
GCCGCCGCCGACGTTCTCTGGCACTTCTTCCCAACTCTCCTCCTCTTCGGACTCCTCGTT
CAGAGGTATTTCGAGATCGACAGTTTGGTTGAGATTCGTTCTTCCCGGGCGAGGATCGAA
GGCCGGTATGAGCGCTGAGAACTGTCGCTTGAGCACGAAGTCGTCGTCCCAGGGTCGGCG
CGAGCGATTGTTTTGTCCAGATCCCGAGCTGCCACGTAGAGCCTCTAAAGCTTCTTCCTC
CATCAGAGAGAGCAAATTACGAGATACCAAAAGTTTACTGACTACCTCCTGGTAAGTGGG
TTCGTTCTCTTTGTCGCTGTCCAGCGCCTCATCACCGTCTTC
(4002 bp)

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