SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40603_c1_seq1
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		PREDICTED:_cytosolic_carboxypeptidase-like_protein_5_isoform_X2_[Bombyx_mori]
Ontology
GO:0004180 F carboxypeptidase activity
GO:0004181 F metallocarboxypeptidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0015631 F tubulin binding
GO:0016787 F hydrolase activity
GO:0030496 C midbody
GO:0035608 P protein deglutamylation
GO:0035611 P protein branching point deglutamylation
GO:0046872 F metal ion binding
GO:0051607 P defense response to virus
GO:0072686 C mitotic spindle
Transcript
Level		FPKM:1.03 TPM:0.81
ORF EntryO_BomoMG19382_5prime_partial:A_BomoMG_comp40603_c1_seq1
Sequence
(Nucleotide)
TTAAGTTTCAAATACAGAACGGCAGATAATTTGAAAGCAACGACATTCTTTGCCTTCACA
TATCCGTTCTCTTTTGCCGAACTACAGATAGCTTTGAACTCGATCGACCTAAAAATGCTA
CCTCTACCGCCCCCTCAGTCACCAGACGACATATACTACTATAGAGAATGTCTCATACAT
TCACTAGAAGGTAGGCGGGTGGATCTGCTAACTGTATCATCATACCACGGTATATCAACT
GACAGGGAAGAAAAACTAACGAACCTCTTTCCGGAAAACCAAGAGAGGCCATTCAAGTTT
CCTAATAAAAAGGTAGTGTTCATATCGGCGCGGGTACATCCAGGCGAGACGCCGTCCAGC
TTCGTGTTCAATGGGTTTTTGAACCTACTCCTCACGAGGAACGATCCGGTCGCGATACAG
TTGCGGAAACTATACGTCTTCAAGATGATACCGTTTCTGAATCCTGACGGAGTCGCCCGG
GGCCACTACAGGACCGACACGAGGGGCGTTAATCTCAACAGAGTTTATTTAAATCCATCT
CTGAGTTACCATCCAACGGTCTACGCTTCGAGGGCCTTGATAAGATATTATCACTTTGGT
TGTGAAAAAGAAGACAGTTTCGAGGAGGGAAATCTATCCATGCGCAGCATCCAGAATGTC
AACGAGACAAGCGAGCCACTCGAAACGAAAAAGAAGAAAAGCTTGTCCCCTTATAAAATT
GGTGAATACGGTAAACGAGAGAAATCGAGCAAATCCGTGGGCTGTAACAAGTCTAGCACG
AGCATCAAACAAGCGAACGCGAGTAAAGACAAGAACGCAATCAAGAACACGAACGAGACA
GGACAACTGGCAGATCAGGTATACGATATGAAACTGCAGGAGATGCCGTCGCAGACCAGC
GACGCTTCATCAAAAGCGTCGGACTGCGTCGAGCCCGACCCGAGGTCCCTACTGACCTGC
AACGTGTTGCGGACTTGTCTCGGCTCCGACGTGCATTTGAGCACCAGCGAAGAACTCAAT
CTACAGGGAAACAATCCATTGCGGCCTTTACGAGATACATTAAAAAATAGCATCAGTCTT
CTTATGGAATCATCGTCTTCGGTTGTTGGTGACAGTTCAACGGAGGGGAAGGAGTCAATA
ACGTCAAACGTCCGCGTGGGCTGGTGCGCAGAGTGTCGGCGCGCGGCGCGGCGTCTGGAC
CTCACGGCGCCGGGGCTGGCCGCCATGCTGCCCGGGTACACGCCCGACGTGGATCCTTTC
ATGACAATCCCTGGTCCCACCCAGACCCGTTCCGAGAACCCGAAGTGTCATACCATAGAC
GAATACAGAGAACACCAGAGACAGCAGTTGGATTATCAACAGAAAATGTTGAGCGAGAGT
AGTTCCGAAGAGAAGGACGCTGTATATTTTTGTGCAAACTGCTTCAAGAGATACGTCGTA
ACCGGACTCAATGAGGAAGTTAAAATATCGGAAGCGGCTTCGTCTGGAAGCGCGGCAGTT
TCGGCACATTCTACCGGCGAAGGTGACGCCAAACCACAACCGATCACTGAAGTATCGAAT
ACTCCGCAATCAGCTGTTGCAACGAAAGAGGAACAAGTCAAATCCGGGATCAAAGCTTTA
AAGAAGAAGCCTCTCCCTCCTCCAGCAGTCAGCACGCGGAGCGCCCACAAGGAGCAGGAA
TCTGGATTATACTTGTACATTGATTTACACGGACACGCTTCTAAAAAAGGTATATTCATG
TACGGGAATCATTTCGAGGACCCGGAGAGCTGCGTGGAGTGCATGCTGCTGCCGCGCATC
ATGTCCCTCAACAACCTTCACTTCCACTTCTCCTCATGTAACTTCACAGAGAAGAATATG
TACCTCAAGGACCGTCGCGATGGAATGTCCCGCGAGGGCTCAGGTCGGGTGGCGGTACTG
AAAGCGACAGGTCTGGTCCGGTCCTACACCCTAGAGTGCAACTACAACACGGGGCGACTA
GTCAACGTGCTGCCCCCCACCACGCGTGACCCCCCACGCGCTTCGCCGCCCACCACGGGA
CCCCCCGCACCACCCAAGTACACGCCGCACATATTCGAAGAGGTGGGGAAGTCATTGGGT
GCATCGATCCTGGACCTGACCGGGCAGCATCCGAACTCCCGCATCCCGTGCTCGGAGCAC
CGATCCCTGCCCGCGCTGAGGGACTGGCTCCGAGCCCACACACGAACTGCTAAGCCCCAG
TTGACGATGTCCCGTCTCCGGCCCAAAGCGTCGTCACCGCCGCGGGCGCCTCTCTACGCG
CGCGCCAAGACTAAAGGCACCGACGAACGCAAGGAGAACGCGTACGTCGCCGCCAGGACC
GACTCTGAGCGCAGACGCAGCCCGCCCGTACTCGCGCAGCGCTCCGGACACGACATCATC
AACGTTAACGTCAAGTTCGTCAAGAAGAACGAGCCGGTCAAGTCGACGTCGCGCACGCGC
TACCTCGCAGAGAACGAGCCCAAACCGAAGACTCTGTCCACGAAGCGCAGGAACATTCTC
GCGATACGGAAACCGAACTCGAGCAAAACGCAAGTCGGCGGCGTCGTCAAGAACAAAGTG
GCGCGGCGGCCGACGGACGAGTCGGACGGGAGCCGCCCCTCCATGCTGACCAGCAAGCGG
AGCTTCGCGCGCTCCATCCGACCGAAGCAAGCCAGCCGGAGCAAGGCCGGCTCCTCGTCG
TCGTCGTCGTCGGCGGGAGGGACGGCCCAGTGGGAGGACGCGGCGGGCTCGCTGGCGGCC
GCGCCCTCCAAGCGCCGACCCTTCCCTCCGCCGCCCTCGCATCTCAAGAAGATCCGACTC
AAGCCGACCTTGTAGCGACAATCTCAGCTCTGACCTATAGATCAACTTTGCTAGCTTTTA
AATTAAATAAAAAAATAACAATCTAACTACATAACCTAACTGTGACGTGAATACTTATTT
CGCTAGAATTAATATTATATTGTAATGAATTAAACAGCGCACCGTAGAAGTATCTTCTCG
ATCGGCGCGAGCGGACTTAGTAAATAATGATAATAGCGGGAAAATATTTGAGGATAGTGA
TATGTAATAAGAATTGCAAGCGTTAAACCGTTAGCTCGGCTTGTGGTGGCGGCCGCCTGT
GACGTCACAGAACCTTGTAATCGAATGATTTGTGAAATAAAATTGCTGTTTGTATTTTAT
AAATATTTTATGTTCCTTGTCAGTGATGTTATAAAACAAAAAAAAAAACATAATCGAATA
CTTAATAATATGATTTTATACAGATTTTTAATGAATTGTACAGTTGATGTCGCGCTCCTA
GAGCGGTCCTCACGTTTCGTGCTAATATTGTCGTGTAATATTGATCTCATTCACAAAGCA
GCTGACTTCAAAAGCGCTCTCGTCTCGAAAATTTTACGTCTTATCCCATCGCATATTATG
TAAACTTGTGTAGTTGTTACTTAGAGTAATTTTATTTAATGATGGGTACGGATGATACTA
AAAAAAATGTGATAAAAAAAAAACAATTTTGTTCATAAAATAATTATCTACTTATAAAAT
ATTTCGAATTAATTCACAAAATAGTCGTTAAGTCGTGGTCTCCGTAATTGTGCAATAACT
GTTCGGCTACTAACTCGTGTTTTATACGTTTTTAAATATACGAATATTATCGTACGGATT
TACCTCAAAATTTTCAAAGTTGTATACATTGTGAGCGTTTACTTTAGAAATCACACTGTA
GTTATTTATTCAACTAAAATATTAATAAATATATTATGAAAA
(3762 bp)

- SilkBase 1999-2023 -