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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40598_c0_seq2
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_pre-mRNA-splicing_factor_CWC22_homolog_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0006909 P phagocytosis
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0071006 C U2-type catalytic step 1 spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:7.57 TPM:5.98
ORF EntryO_BomoMG19331_complete:A_BomoMG_comp40598_c0_seq2
Sequence
(Nucleotide)
TTATAGTCTACACCGGCTGGAGACAATTTTAACATGACAGTTTATATACATCATTTGTTG
TAAGGGGAGGGTCAGGAGCGCTGCCTGGACCGTTCCCGCTTTTTCTGGCTTCGTTGCGGC
GACTCCAATCGCTTATTCGTTGAGCAGTCCCAGTACCTCCCGGAGACCTCATTCGGTGCA
TTCTGCCTGCATTTGATATCCCAGCCGTCGTCGTCGTCAGAAGCATCACTCTTCCTCCTG
CCGCCTCTCTTTTGTTTGTCTTTCCTAGTGCGACGCTCGCGGCGGCCCTCGTCACTACTG
TGCCCTCTCTGTTTCCTGTCGTCGTCACTGCCCGCATTCCTACTTCTCTTGTCCTTAGTT
CTCCTGGACTCGGTCTCGTCTCGAGCTGAATATTCATCATTGTGATATGTTTCCTTTTTG
TGTTCATCGTCCCGGGCGTTCTTTCGTTTCTTTTCCTTCTCTTTTTCACCTTTTCTATTG
TATTCAGAGTCCCGTCTTCTACTATCTTCTTCACTGTTCCTGGTCTGTCTCTTATCCTTT
TCCCTGTCAGTTACTCTGTCATCATCTTTTCGACTTCTCTTATCCTTTTCTTTCTCACTG
TCTCTATCAATATCTTTACGACTGTTCCCATCACGACTCTTTTCACCCTCCTTTCGATTC
CTCCTGTCATCCTTTTCTGGAGCTCTTCTATCTCTTGGGTCTTGCTCGTGATCTTCATCT
CGTCTTCTCAGACCTCTCCCGTTCTCGTCCCTGGCACGTCTTCCTTGTTGGTCTGTATCC
CGGTGTGCGCCCCCCCGCCCCCCGTCGCCGCGGTCGCGAGGGTCGTGTCGCCGCGCGTCC
CTCCCGTAAGTATCGTAGAACCCCTCATGTCCCCACCGCTCGACCTTATTGTCTTGGGGT
TTTTCTGGTTCTGGTGATTTTTCCTTGTTTTTATTCTTTTCTTTCTTCTTTTTCTGTGTT
TCTTCCTCAGATTCGCTTGAGCTGGAATCACTTGAAGAAGACGAATCCGAGCTGGAGTCA
GAGCTGGAGTCACTGTCTATTTTGATCTCTGTTGGTGGCGCCGGTGTATTCTTGGGCATT
TGTTTGAGGTGCTCACGTAACTCATCAGTTAGTCCACCAAGTCCGATGGACGTGAAGAAG
TTTATAGAGAACCGCGTGTTTCTCGGGTTGTCGCGGGGAAACAGTCCGGCAAACGCCTCT
TGTAACGTCGGATCTTGTAGACGGTCATTCAGTTTCTTTAGTCCCATGTATTCAGCCAGT
TCTTGAAACAGAATCTTTATGTATATCCGACTAGAACTAGTTGTGTCTTCTTCGTTCAAT
TTAACACATTCCAAAGATTCCCAACTAATGGAATCTGTAAACAGCAGATGGGCGAAAAAC
TTGCTGACATTTCTGAGTCTATTCGTGTCCAACCTGTGTGCTGTTGAATATGAATCTTTG
AAAATTTCCTCGAAAGGTCCGATGTATATTCTGTTGATGTTGCAAAACCTTTGGGCCAAT
AAGCCATAGAATTTCTCATATGTTCTCTGCTCAGCACAGCAGTCTAAGAACATGTGGCAT
AGTTCCACTTCTTGTCCTGGTTTCAGTTGCATCTTCATTAGTTTATGAGCACATTCTTCG
AAATCTAAACTGGAGTTGATTGTCAGGTATATAGTGCGTCTCAGAGCCACTAAGTTTGTT
TCTGTGTTATCAATAATAGTCATTTCTTTTTTTGGTTGTTCTTCATCTTCTTCATCAGAT
TCCTCACTACCGCTTTCTCCTGAACCATCTTCATCACCGGACTCAGCATCAGAACCAAGT
ATTTCCTTGCAAAGATTCTTGTACTTCTGTTCATTCTCTTCATACTTTTCATCAAATTTG
AAAACATTCAGGATATCTTGAGGATCTGTAGCGTCATCCAGCATCAATAGATGTGTGAAC
TGTTCTTCTTCAGGCACGAGCTCCAACTCTTCAATCAGTGCCGGGTGGTCTTTGAACCCA
TCCTTCCAAACTTGGAACATTACTTCTATCATGTACTGAACTCTTTTGTCTAACTGACCT
TCGTGCAAAATGTTCCTTAGCATCTCGAAAATTGCATTTACACCTTTAGATGATACTTCA
GTCAATTTTTGGCCACATTCCTTTAAGAATGCTATGGCAACTTCAACTGAATCATCTGTT
GGTGATTCAACTAGTAAAGTGAGAAGTTCTAAAGCCAGAATTTCATGTGCCACTCTCTGA
TTCACTAAATGTGCAATGAAAGATGCAGAGGAAATGCAAATTGACTTATCATTGCGTTTA
AAACCTCTTTTGAATTGAATCACTAATCTTTTCAGTAACAACTCCCCGATATTAGGAAAA
CGTGAATTGACTGCTGATACTAGAGCCGCGTATACATTAGTGAATGTTGGCGAGGCTGCC
TGGGCTTGAATAACAGAACGGCATAACAAACCTCGACCTCTGACAATGTTTTCTTTCAAT
AATTCCTTTATAATGATACCTATGTTACCGACATTAATTTTGTTGATGTGACCGTGAATT
GACTTTTTGAGAGCTTCCCAGGCAAGTCTTTGGTAAGCTATCGAGGACTTATCCGTGATC
TGCGCTTGCATCATCCTCAGTCTTGCTGGTGGAATGTATGCACCTCCTGTTCTAGTATTC
AACATATCAGTATCTTTTGCGCGTCTTTCTGGCTTTGTAGAGGCATCTTTTTTTGTTTCT
GGCTCTTTTTGTGTGTCTTTAACTCGTTTATCTTCCCTAGCCTTGTAATGAGGTGAGCGT
GATTTGGAACGCCGGCGTTTACTTCTATACTCCCTATTCTGCTGTTCCTCAAGTGACTTA
GATCTAGATCTAGCCCGTCTCGACCTTTTCGACCTACGCCTTTCATCATCTTCCTCGTAT
TTATCTTTCTTCTGCTTGGTGTTAGTCTTCTCCATTCTTATGATTTTTGTTTTGACACTA
CTAGACTACAATTGAACTTTTTATAAAAGAATTTAATACTGTATCTAGAACTCAATATTA
TTAAAACT
(3008 bp)

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