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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40595_c0_seq7
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		PREDICTED:_serine/arginine_repetitive_matrix_protein_1_isoform_X3_[Bombyx_mori]
Ontology
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016363 C nuclear matrix
GO:0016607 C nuclear speck
Transcript
Level		FPKM:1.42 TPM:1.13
ORF EntryO_BomoMG19324_complete:A_BomoMG_comp40595_c0_seq7
Sequence
(Nucleotide)
GCGACGGCATAGTTGTACGATAACTGCGTAGCTGATTTATTTTATATTGTGTGTAACCAA
TTTGACTTATCATTGGCGTCCTCACGCCTAACAACGGGGCCTTATAACCCCACAAATTTA
CACCGGAAGAAGTATTGATTTCTCCGTTAGCAAGATGATGATGTATACGGGAACTAGTAC
AGAGCAGGACACCCGCTTCAGTGACAAGGAGAAGAAGCTGATGAAGCAAATGAAGTTTGG
AGATTGCCTCACTCAGCAGGTTGACATGTCAAAAGTGAAGCTCGACGTGCTGAAGCCGTG
GATCACTCAAAAGATAACAGAAATTCTAAACATGGAAGATGATGTTGTCATTGAATATGT
CACCAACCAGCTTGAAGAAAAGGTGAGTAACCTATTGTGTTTCTGGTTTACTGTTTTATA
CATGTCAATAGGAAAATGTAATCATTGCAGTTTCTTTTTATGGAATGCATATTCATCTTT
GAAAATATCATAGTCTTCTTCAATAATTTCAAATAAAAGAAACTGCAATTGAAAAATAAA
TGTCATATGTAATTGATTGCGTATGGATATTTTTATGGTCCCCATCGGTTAGCGCGCCGT
CGAAGTCATCCCCGCAAGGTGCTGCCAGCTCCCCGACGCTGCCTGCTAGCTACGCTCTTT
CGGAGGCCCTTAGCATATCTGCGATGCAAGTTTTGAAGAGGGCGAGTGTGCGGTGAGTGT
TGGCGCGGGGCGTCATATGCAGAGCATCACATCGGTCTACAACTTCGCTGCGCCCTCATC
ATCTCTGCATCGTCGCCACTCGACACGCTATGAAGACTTCTAAAAAACATGAAACATTTC
ATATTATGTATATTCATGTTGCTTCCTTACCTGAGTCATATCTGTTACACTTATTTGCAT
ATTTATAAGTTTAAACTCTTAATGGCTTTAGTATCTTATTCCAGATATACCCATTAAAAA
AAATCGTTTTAAACACATCATGAAGTGAAAGAATCTTGAACATTAAAATGATGATGAATT
ATACTGAGTACAACATGGTACAAATCCTGCCCAGTAATCGACGTCGTCGTTATGTACATC
GGGGTTTAGGTGTTTGCGATTTTAATACGATTTTTTTCTTTTCCTGATCCCATCTATGTC
GGATCCTAGTTCCCATGCCCAAAGAAAATGCAGATCAACTTGACTGGATTCCTAAATGGA
AAGAACGCACGCCTTTTCATGGGAGAGTTATGGGAGCTGTTGCTGAGCGCGCAGGCCAGT
GAAAACGGTATACCCGAATCATTTACTCAGCAGAAGAAAGAAGAAATAAAGAAGAGAATG
GAGGAGCAGCAGAACAAGGACAAAGACAAGGAGCGACGGAGATCGAGGTCCCGGTCGCGT
TCCCGGCGCCGCTCTCGCGACCGACGGCGCTCGCGAACTCGTTCTCGTGATCGTTCCAGT
GACAGAAAGCATCGTAACGGCGGAAGTCCGCGTCGATCGAGACGGCGCAGCAGCCCGATC
AGAGACAAGGTCAGCCCTGCGAAAACTGAACCGGAAACCAAAGCTCCAAGTGTAGCAGAG
AACGGTAAGTCACCAGAAAAGAATGAAGAAGAGGTTAAAGAAGAACCAGTTCAGAATAAT
TCTCCAACTGTCAATGAACCTGTCAATGATGAAAACAAGGAACCAACCATAACACAGAAC
GTTGAAGAGAAATCTGAAGTTGAAGGTCAGAAATCTAGATCTGTGTCACCTGCTAAGTCA
ACGGACGAGAAAGAGAAAACCAATGATGAGAAACCTGCTGATAAGTCGCGCCGATCATCT
AGCGAAAGACGCTCGTCTTCAGCTTCATCCCGTGGCAGTGTGAAGAAGAGATCGTCACAT
AAAAAACGACAATACCGTTCGAATCGTGATTCTTCTACAAGTGTTAGCCCTAGGCGCAGC
TCCCGAAGAGAAAGGAGTAAATCTCGCCGTAGGAGCAGCCGACGTAGGTCGTTAGATCGT
CGTGAGAGGGAAAGAGAACGGGAGAGAGAAAGAGAACGCGAACGTGAAAGAGAGCGACGA
CGCCGTGAACGAGAACGGCGTGAGAGGTCGAGAGAACGTCGACGATCGCTTGAAAGACGC
AGACGGTCGCGTTCACGCTCTCGACGACGTTCAAGAGACAGGTCTCGAGACCGTCGCCGC
TCCCGTTCACGTCGCAGGTCGCGGTCGAGGCGTCGCTCAGGACGCAGGTCACGCGACCGA
CGCTCACGTGATCGCCGCTCCAAAGACCGCCGCTCACGAGATAAGTCCAGAGAGCGGAAA
TCGCGCGATCGCTCCAGGAGATCCAGGGACAGGAAATCTCGCGATAGAAGGTCTAGCGAT
ATTATCAAGGAGCGTTTAGAGAAATCTGTCTCGATTCCGAGAAAAGAAAATAATGACAAA
TTACCCAAAAAGCCTGAGCACCTGCCTATTCCGCGTGAGCAATCTAAAGAGCGCATTATA
TCTAGCACAAGCCGAGAATCATCAGTAGCTGTTGAAAAACCCCCACCAGAACCTTTTAAT
GACGGAAAAACCCAGTCAGACCACACTGACGACGAAGAGAAAGAAGATATTGTAAATATT
CCAAACCTGCGTGAATACTCAAAAAGTCTTTCACGCACTCCATCACCGTTCTTGCGAAGA
CATGAAATTGACAAAAATAAGAAATCTGATGAAGTTTCGGGAAAAGAGCAGAATGAGGAC
GAAATAAAAACCAAGGAATCCAAAAGAGCTAAACGTAAAGCCCATCAATCAGATTCTGAA
AGTGCGAGTAGCGAGGAGCTATCGAAATCCAAAAGTAAGTCCAAAATCAAGCGTAAGGAG
AAGGGTACATCTAAGAGAAATAAGAAACTCAAAAAAGAGAGCTCTTCTAGCGATAGCGAT
TCTGAGGAATCTTCTTCTAGTGAATCTGAAGAAGATAGGAAGAAGAAAAGCAAAAAGAAT
GCTAAAAAGAAGTTGGCCAAGAAATCAAGAAAGAAAAGAGCTCGCTCGTCGAGCTCCGAC
TCCAGTTCGGAAGAAGAAGTTAAACACAAGGCTTCAAAGACAAAACAAAAAAATGTCGTC
GACGAATCTGATGTTGATAAGAAGTCTAAAAAACGCGCCAAGGATGCGAGTAGCGAAAGG
TCAAGGTCTGAGAAAGTTGAAAACAAGCTCAAGTCCAAAAAAGTCGATTCTGAGGATTCC
CAAGATGATAGTTCGGATACTGATGCAAAATCTAAGAAGAAAAACCCTAAACGTGATACT
TCTAGTTCAGAAAAAGACCCAAAACGCGGTAAAAAAACTGACTCTATTAAGGAAAAAGCC
TTATCACCAGAAGTTGCTAAATTAAAGAAAGTAGAGGATAAACCAGCAAAAGTGAAAGTA
GACGATGCTAAACCTAAATCTCGTGACGAAAACGAGAAAAAACCTAAAAAGAGGGAAAAG
GAAGAGTCCTCTTCTGAAAGTGACCAGGTGTCAAAGAAGAAAGCAAGGAAGAAGGTAACA
GACTCAGAGTCAGATTCAGACAGTGATGAACCTAAGAAATCCAAGAAAAATAAGAAACAT
AAGAAGCATTCTAAAAAGCATAAGAAACACAAGAAGCATAAGAAATCATCAAAGAAAAAA
GAGGATTCTTCTGATAGCGATGAAGCCGAGGAAGAAGAGGAAGAAGGAAAAGTTAATAAC
GAAGATTTGGAAAAGAAACTGAGAGAGAGAGCATTGAAGTCGATGAAGAAACAAACTAGT
GTTTCTGGATCCGATTAGTGTTCGGTTTTTTTTCTATTTGACTTCTAAGAAAAATTTCAT
TGAACGTACAGCATGTTATTAAAATATTTTAATGAATTTGCTGAAACGATTTTAATTAAC
ATATATTTCATATTGTTAGTAATA
(3864 bp)

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