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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40595_c0_seq4
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		PREDICTED:_serine/arginine_repetitive_matrix_protein_1_isoform_X3_[Bombyx_mori]
Ontology
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016363 C nuclear matrix
GO:0016607 C nuclear speck
Transcript
Level		FPKM:0.57 TPM:0.45
ORF EntryO_BomoMG19314_complete:A_BomoMG_comp40595_c0_seq4
Sequence
(Nucleotide)
GCGACGGCATAGTTGTACGATAACTGCGTAGCTGATTTATTTTATATTGTGTGTAACCAA
TTTGACTTATCATTGGCGTCCTCACGCCTAACAACGGGGCCTTATAACCCCACAAATTTA
CACCGGAAGAAGTATTGATTTCTCCGTTAGCAAGATGATGATGTATACGGGAACTAGTAC
AGAGCAGGACACCCGCTTCAGTGACAAGGAGAAGAAGCTGATGAAGCAAATGAAGTTTGG
AGATTGCCTCACTCAGCAGGTTGACATGTCAAAAGTGAAGCTCGACGTGCTGAAGCCGTG
GATCACTCAAAAGATAACAGAAATTCTAAACATGGAAGATGATGTTGTCATTGAATATGT
CACCAACCAGCTTGAAGAAAAGGTGAGTAACCTATTGTGTTTCTGGTTTACTGTTTTATA
CATGTCAATAGGAAAATGTAATCATTGCAGTTTCTTTTTATGGAATGCATATTCATCTTT
GAAAATATCATAGTCTTCTTCAATAATTTCAAATAAAAGAAACTGCAATTGAAAAATAAA
TGTCATATGTAATTGATTGCGTATGGATATTTTTATGGTCCCCATCGGTTAGCGCGCCGT
CGAAGTCATCCCCGCAAGGTGCTGCCAGCTCCCCGACGCTGCCTGCTAGCTACGCTCTTT
CGGAGGCCCTTAGCATATCTGCGGTATTTACGGGGAAAATTAAATAATTACAAGATAACT
CATAATTAAATGAAGAAGAGTTTTCAGAAAAGGAAAATAACTAAAATACATAATTAGAGT
ATTAGTTCCCCAAAGCCATTAAGAGGTGATTTGACTCAGTGCAAGGAAGTTTTGTCGTTA
GGCTTTGCGTTCAGCATAATGTGGTTGTTATCGCAACACCCTTACAGATGCAAGTTTTGA
AGAGGGCGAGTGTGCGGTGAGTGTTGGCGCGGGGCGTCATATGCAGAGCATCACATCGGT
CTACAACTTCGCTGCGCCCTCATCATCTCTGCATCGTCGCCACTCGACACGCTATGAAGA
CTTCTAAAAAACATGAAACATTTCATATTATGTATATTCATGTTGCTTCCTTACCTGAGT
CATATCTGTTACACTTATTTGCATATTTATAAGTTTAAACTCTTAATGGCTTTAGTATCT
TATTCCAGATATACCCATTAAAAAAAATCGTTTTAAACACATCATGAAGTGAAAGAATCT
TGAACATTAAAATGATGATGAATTATACTGAGTACAACATGGTACAAATCCTGCCCAGTA
ATCGACGTCGTCGTTATGTACATCGGGGTTTAGGTGTTTGCGATTTTAATACGATTTTTT
TCTTTTCCTGATCCCATCTATGTCGGATCCTAGTTCCCATGCCCAAAGAAAATGCAGATC
AACTTGACTGGATTCCTAAATGGAAAGAACGCACGCCTTTTCATGGGAGAGTTATGGGAG
CTGTTGCTGAGCGCGCAGGCCAGTGAAAACGGTATACCCGAATCATTTACTCAGCAGAAG
AAAGAAGAAATAAAGAAGAGAATGGAGGAGCAGCAGAACAAGGACAAAGACAAGGAGCGA
CGGAGATCGAGGTCCCGGTCGCGTTCCCGGCGCCGCTCTCGCGACCGACGGCGCTCGCGA
ACTCGTTCTCGTGATCGTTCCAGTGACAGAAAGCATCGTAACGGCGGAAGTCCGCGTCGA
TCGAGACGGCGCAGCAGCCCGATCAGAGACAAGGTCAGCCCTGCGAAAACTGAACCGGAA
ACCAAAGCTCCAAGTGTAGCAGAGAACGGTAAGTCACCAGAAAAGAATGAAGAAGAGGTT
AAAGAAGAACCAGTTCAGAATAATTCTCCAACTGTCAATGAACCTGTCAATGATGAAAAC
AAGGAACCAACCATAACACAGAACGTTGAAGAGAAATCTGAAGTTGAAGGTCAGAAATCT
AGATCTGTGTCACCTGCTAAGTCAACGGACGAGAAAGAGAAAACCAATGATGAGAAACCT
GCTGATAAGTCGCGCCGATCATCTAGCGAAAGACGCTCGTCTTCAGCTTCATCCCGTGGC
AGTGTGAAGAAGAGATCGTCACATAAAAAACGACAATACCGTTCGAATCGTGATTCTTCT
ACAAGTGTTAGCCCTAGGCGCAGCTCCCGAAGAGAAAGGAGTAAATCTCGCCGTAGGAGC
AGCCGACGTAGGTCGTTAGATCGTCGTGAGAGGGAAAGAGAACGGGAGAGAGAAAGAGAA
CGCGAACGTGAAAGAGAGCGACGACGCCGTGAACGAGAACGGCGTGAGAGGTCGAGAGAA
CGTCGACGATCGCTTGAAAGACGCAGACGGTCGCGTTCACGCTCTCGACGACGTTCAAGA
GACAGGTCTCGAGACCGTCGCCGCTCCCGTTCACGTCGCAGGTCGCGGTCGAGGCGTCGC
TCAGGACGCAGGTCACGCGACCGACGCTCACGTGATCGCCGCTCCAAAGACCGCCGCTCA
CGAGATAAGTCCAGAGAGCGGAAATCGCGCGATCGCTCCAGGAGATCCAGGGACAGGAAA
TCTCGCGATAGAAGGTCTAGCGATATTATCAAGGAGCGTTTAGAGAAATCTGTCTCGATT
CCGAGAAAAGAAAATAATGACAAATTACCCAAAAAGCCTGAGCACCTGCCTATTCCGCGT
GAGCAATCTAAAGAGCGCATTATATCTAGCACAAGCCGAGAATCATCAGTAGCTGTTGAA
AAACCCCCACCAGAACCTTTTAATGACGGAAAAACCCAGTCAGACCACACTGACGACGAA
GAGAAAGAAGATATTGTAAATATTCCAAACCTGCGTGAATACTCAAAAAGTCTTTCACGC
ACTCCATCACCGTTCTTGCGAAGACATGAAATTGACAAAAATAAGAAATCTGATGAAGTT
TCGGGAAAAGAGCAGAATGAGGACGAAATAAAAACCAAGGAATCCAAAAGAGCTAAACGT
AAAGCCCATCAATCAGATTCTGAAAGTGCGAGTAGCGAGGAGCTATCGAAATCCAAAAGT
AAGTCCAAAATCAAGCGTAAGGAGAAGGGTACATCTAAGAGAAATAAGAAACTCAAAAAA
GAGAGCTCTTCTAGCGATAGCGATTCTGAGGAATCTTCTTCTAGTGAATCTGAAGAAGAT
AGGAAGAAGAAAAGCAAAAAGAATGCTAAAAAGAAGTTGGCCAAGAAATCAAGAAAGAAA
AGAGCTCGCTCGTCGAGCTCCGACTCCAGTTCGGAAGAAGAAGTTAAACACAAGGCTTCA
AAGACAAAACAAAAAAATGTCGTCGACGAATCTGATGTTGATAAGAAGTCTAAAAAACGC
GCCAAGGATGCGAGTAGCGAAAGGTCAAGGTCTGAGAAAGTTGAAAACAAGCTCAAGTCC
AAAAAAGTCGATTCTGAGGATTCCCAAGATGATAGTTCGGATACTGATGCAAAATCTAAG
AAGAAAAACCCTAAACGTGATACTTCTAGTTCAGAAAAAGACCCAAAACGCGGTAAAAAA
ACTGACTCTATTAAGGAAAAAGCCTTATCACCAGAAGTTGCTAAATTAAAGAAAGTAGAG
GATAAACCAGCAAAAGTGAAAGTAGACGATGCTAAACCTAAATCTCGTGACGAAAACGAG
AAAAAACCTAAAAAGAGGGAAAAGGAAGAGTCCTCTTCTGAAAGTGACCAGGTGTCAAAG
AAGAAAGCAAGGAAGAAGGTAACAGACTCAGAGTCAGATTCAGACAGTGATGAACCTAAG
AAATCCAAGAAAAATAAGAAACATAAGAAGCATTCTAAAAAGCATAAGAAACACAAGAAG
CATAAGAAATCATCAAAGAAAAAAGAGGATTCTTCTGATAGCGATGAAGCCGAGGAAGAA
GAGGAAGAAGGAAAAGTTAATAACGAAGATTTGGAAAAGAAACTGAGAGAGAGAGCATTG
AAGTCGATGAAGAAACAAACTAGTGTTTCTGGATCCGATTAGTGTTCGGTTTTTTTTCTA
TTTGACTTCTAAGAAAAATTTCATTGAACGTACAGCATGTTATTAAAATATTTTAATGAA
TTTGCTGAAACGATTTTAATTAACATATATTTCATATTGTTAGTAATA
(4068 bp)

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