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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40595_c0_seq3
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		PREDICTED:_serine/arginine_repetitive_matrix_protein_1_isoform_X2_[Bombyx_mori]
Ontology
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016363 C nuclear matrix
GO:0016607 C nuclear speck
Transcript
Level		FPKM:17.33 TPM:13.69
ORF EntryO_BomoMG19308_complete:A_BomoMG_comp40595_c0_seq3
Sequence
(Nucleotide)
GCGACGGCATAGTTGTACGATAACTGCGTAGCTGATTTATTTTATATTGTGTGTAACCAA
TTTGACTTATCATTGGCGTCCTCACGCCTAACAACGGGGCCTTATAACCCCACAAATTTA
CACCGGAAGAAGTATTGATTTCTCCGTTAGCAAGATGATGATGTATACGGGAACTAGTAC
AGAGCAGGACACCCGCTTCAGTGACAAGGAGAAGAAGCTGATGAAGCAAATGAAGTTTGG
AGATTGCCTCACTCAGCAGGTTGACATGTCAAAAGTGAAGCTCGACGTGCTGAAGCCGTG
GATCACTCAAAAGATAACAGAAATTCTAAACATGGAAGATGATGTTGTCATTGAATATGT
CACCAACCAGCTTGAAGAAAAGTTCCCATGCCCAAAGAAAATGCAGATCAACTTGACTGG
ATTCCTAAATGGAAAGAACGCACGCCTTTTCATGGGAGAGTTATGGGAGCTGTTGCTGAG
CGCGCAGGCCAGTGAAAACGGTATACCCGAATCATTTACTCAGCAGAAGAAAGAAGAAAT
AAAGAAGAGAATGGAGGAGCAGCAGAACAAGGACAAAGACAAGGAGCGACGGAGATCGAG
GTCCCGGTCGCGTTCCCGGCGCCGCTCTCGCGACCGACGGCGCTCGCGAACTCGTTCTCG
TGATCGTTCCAGTGACAGAAAGCATCGTAACGGCGGAAGTCCGCGTCGATCGAGACGGCG
CAGCAGCCCGATCAGAGACAAGGTCAGCCCTGCGAAAACTGAACCGGAAACCAAAGCTCC
AAGTGTAGCAGAGAACGGTAAGTCACCAGAAAAGAATGAAGAAGAGGTTAAAGAAGAACC
AGTTCAGAATAATTCTCCAACTGTCAATGAACCTGTCAATGATGAAAACAAGGAACCAAC
CATAACACAGAACGTTGAAGAGAAATCTGAAGTTGAAGGTCAGAAATCTAGATCTGTGTC
ACCTGCTAAGTCAACGGACGAGAAAGAGAAAACCAATGATGAGAAACCTGCTGATAAGTC
GCGCCGATCATCTAGCGAAAGACGCTCGTCTTCAGCTTCATCCCGTGGCAGTGTGAAGAA
GAGATCGTCACATAAAAAACGACAATACCGTTCGAATCGTGATTCTTCTACAAGTGTTAG
CCCTAGGCGCAGCTCCCGAAGAGAAAGGAGTAAATCTCGCCGTAGGAGCAGCCGACGTAG
GTCGTTAGATCGTCGTGAGAGGGAAAGAGAACGGGAGAGAGAAAGAGAACGCGAACGTGA
AAGAGAGCGACGACGCCGTGAACGAGAACGGCGTGAGAGGTCGAGAGAACGTCGACGATC
GCTTGAAAGACGCAGACGGTCGCGTTCACGCTCTCGACGACGTTCAAGAGACAGGTCTCG
AGACCGTCGCCGCTCCCGTTCACGTCGCAGGTCGCGGTCGAGGCGTCGCTCAGGACGCAG
GTCACGCGACCGACGCTCACGTGATCGCCGCTCCAAAGACCGCCGCTCACGAGATAAGTC
CAGAGAGCGGAAATCGCGCGATCGCTCCAGGAGATCCAGGGACAGGAAATCTCGCGATAG
AAGGTCTAGCGATATTATCAAGGAGCGTTTAGAGAAATCTGTCTCGATTCCGAGAAAAGA
AAATAATGACAAATTACCCAAAAAGCCTGAGCACCTGCCTATTCCGCGTGAGCAATCTAA
AGAGCGCATTATATCTAGCACAAGCCGAGAATCATCAGTAGCTGTTGAAAAACCCCCACC
AGAACCTTTTAATGACGGAAAAACCCAGTCAGACCACACTGACGACGAAGAGAAAGAAGA
TATTGTAAATATTCCAAACCTGCGTGAATACTCAAAAAGTCTTTCACGCACTCCATCACC
GTTCTTGCGAAGACATGAAATTGACAAAAATAAGAAATCTGATGAAGTTTCGGGAAAAGA
GCAGAATGAGGACGAAATAAAAACCAAGGAATCCAAAAGAGCTAAACGTAAAGCCCATCA
ATCAGATTCTGAAAGTGCGAGTAGCGAGGAGCTATCGAAATCCAAAAGTAAGTCCAAAAT
CAAGCGTAAGGAGAAGGGTACATCTAAGAGAAATAAGAAACTCAAAAAAGAGAGCTCTTC
TAGCGATAGCGATTCTGAGGAATCTTCTTCTAGTGAATCTGAAGAAGATAGGAAGAAGAA
AAGCAAAAAGAATGCTAAAAAGAAGTTGGCCAAGAAATCAAGAAAGAAAAGAGCTCGCTC
GTCGAGCTCCGACTCCAGTTCGGAAGAAGAAGTTAAACACAAGGCTTCAAAGACAAAACA
AAAAAATGTCGTCGACGAATCTGATGTTGATAAGAAGTCTAAAAAACGCGCCAAGGATGC
GAGTAGCGAAAGGTCAAGGTCTGAGAAAGTTGAAAACAAGCTCAAGTCCAAAAAAGTCGA
TTCTGAGGATTCCCAAGATGATAGTTCGGATACTGATGCAAAATCTAAGAAGAAAAACCC
TAAACGTGATACTTCTAGTTCAGAAAAAGACCCAAAACGCGGTAAAAAAACTGACTCTAT
TAAGGAAAAAGCCTTATCACCAGAAGTTGCTAAATTAAAGAAAGTAGAGGATAAACCAGC
AAAAGTGAAAGTAGACGATGCTAAACCTAAATCTCGTGACGAAAACGAGAAAAAACCTAA
AAAGAGGGAAAAGGAAGAGTCCTCTTCTGAAAGTGACCAGGTGTCAAAGAAGAAAGCAAG
GAAGAAGGTAACAGACTCAGAGTCAGATTCAGACAGTGATGAACCTAAGAAATCCAAGAA
AAATAAGAAACATAAGAAGCATTCTAAAAAGCATAAGAAACACAAGAAGCATAAGAAATC
ATCAAAGAAAAAAGAGGATTCTTCTGATAGCGATGAAGCCGAGGAAGAAGAGGAAGAAGG
AAAAGTTAATAACGAAGATTTGGAAAAGAAACTGAGAGAGAGAGCATTGAAGTCGATGAA
GAAACAAACTAGTGTTTCTGGATCCGATTAGTGTTCGGTTTTTTTTCTATTTGACTTCTA
AGAAAAATTTCATTGAACGTACAGCATGTTATTAAAATATTTTAATGAATTTGCTGAAAC
GATTTTAATTAACATATATTTCATATTGTTAGTAATA
(3097 bp)

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