SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40585_c1_seq2
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		PREDICTED:_phosphofurin_acidic_cluster_sorting_protein_1_[Bombyx_mori]
Ontology
GO:0000042 P protein localization to Golgi apparatus
GO:0005515 F protein binding
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0016032 P viral process
GO:0030137 C COPI-coated vesicle
GO:0032092 P positive regulation of protein binding
GO:0034613 P cellular protein localization
GO:0044325 F transmembrane transporter binding
GO:0048471 C perinuclear region of cytoplasm
GO:0050690 P regulation of defense response to virus by virus
GO:0072661 P protein localization to plasma membrane
Transcript
Level		FPKM:0.67 TPM:0.53
ORF EntryO_BomoMG19269_complete:A_BomoMG_comp40585_c1_seq2
Sequence
(Nucleotide)
GCAGATTACATCAGTTTCATTTTTGATATGGGGGTGTTTTAAGTGAGCCTGCACAGGTCG
ACACCACCAACCTGCTATTTCTATTCCGGTCGCGAAACCTATGGTGCGCTGTGAAAGACG
GGAAAATGGTTATTACAATGTAAAGGATCCTGCATCGACAATAATCATGTTCTAATCATC
TATGAGCTTCCATAACAGCTGACCGTCTTACCTAACAAATAAAAAATACTAATTGGCATT
CCAAATGACTGTGTCGTATCGATAAATTCAGACGGCATCTAAAATTGTGAAAAGACTTAC
ACTAAAATCTTATTCTACCAGCGTAATCAATTATTACATTTAAGCTTTTCACACCGAAGC
TTAAATTATTTATTGCCCAAAGCGTATTAAAACTTCTGTCTTATCTGTTGGTTATCAAGC
TCTATCCTTCTCTCACACAGATAAGTGCTTTTTTGTTTTGTTGCTTGAACTACACATTTT
TATAATCGACAAACATTCGATGTAGAAATAATAATAGAAAATTACATGTAAAAAGCATAA
ATTAATTAACTCAAACAAGAACTTGAGTTTAAGTAACTTATCTTTTTTTACGTTGATTTG
ACATCGGTGAATGAAATAGAGATACAATTTACATCGAATGTTGAGCGATCATATCGATAT
CATAGAACATGAATAATACTGACGAACAGCACTAATTTAGGTACTAACACATACTCGATA
TGTCTACATATCATTCTTATTCAATATTCACCTAACTTGTCTACAGCAATATTATTGATT
CAGAACAGTCTGTTTATTCATTACGGTATGTTCAAGAAAGTAACTAGTCTTTATTTAACA
CTCATGTTTATTTAGTGTAAGTGAATTGGTGTTATGTATACAGTTCAATTCTTTATCAAT
ATATGTTGTATGACTCTATTTTTAGTAATCCAAAGTATCAAAGTAAAATAGTGATTTTTT
ATTTAGTTTTTTCTCTAAGCCTACGGAGATTGTTGTATTTATTCCAAATGGTATTTGTAC
TTTATTCTTAGTACATACATGAGCTACATTAGAAATCGAATAATTAAAAGTTAATCTACA
TTGCTGGATATTATTTTTAGAAATAGTAACACGGTAGCTAATCGAATGTATATAAATTCA
CGAAATGGCTCGGAATTTTTAAAGTATGTAATATCTAAAAAATTCTAAGCGATAAAAAAA
AAACAATTAGGAAGATATTGTATAATCTCAACAATGCAAAATCTAGAGTTGACGTATAAA
ATTAAAAACGCCCTACCTTAGCTGCTATGTAAAATAAAAACATGAATGCACCACGACGTC
TCTCTTCCGTTATAAAAGAATTAAAACACATTCATGAATCACAGACAATACAAAAAAAAA
TACATTTTCCTCCGCTCTTTTACACACTTGATATGTGTCGAAACTTATCGAAACAATACG
TTTCTCCATGCGCCGATACTATACTATACTACATAATATATTGTTGGAAATGTCACGAAC
CATTATTCATCGATATACACCGAGTACACAAACATCTACGATTACATTAAAATTTAATAC
TAACATTTAATGACTATAACGAAATAGTTATTGTGGTTATTGAGCCTTTATTATGTAACT
TGAATAATATATAGCGTATAAAAACTGCGTAGCATGCGTTTACACAGTCGATAATAATTA
CATATTACCATATTGATATAAAATTTATTAAACATCACACATAACTGCAACTCATTGTTA
ACAGTTAATGTAAATAATATTATTTGATAAAATAACAAATTTAATTTTCAAATAAATGTT
TCAACATTTAATAGTAGCCCCGCGACGTTGTCGATATAACCCAAGCTACACAACAAAAGC
TACACCACTACGCTCCTACAATACAATGGCAGCTCGACAATTTAATAAATATCGATATTG
AAATGATAATACAATTATGTAGCAAGTCATTGTAATGATAAATATCGACAAGCCTAATAC
AGTTCGACTTTATTTAGAGCCCTGATTCGACCGGAATGCATCCGGAGGTGGACCGTTGCG
AGACTACGTACCGTCAAACCTGCCAACCAACGTTTGACGATCGAGCGACATCGGCCCCTT
TGAAGCAAAAGCGAGAAATACCGATAAAAGATCAACGCGCCCTTAGGTCTCTGGAGGGGC
GAGGGGAGCTCCGCAGGTCGCCACGGGGAAGGTCTTGACGTGCGTCTGCCACTGTGTCGA
CAGTTGGAAAAATTTAACCCCATTCCACTCTGTTCCGTCGATAAATACTTTGAGTGGTTG
ATTGTGCGAGCTCTTTGCGGAGCAGATGAGTCTGGCCACACCGTCCACTGTCTGGGTGCG
TCCCACTTCTTGTTCGCCCCCTTTCTCTTTTTTCTTGCCAAGTCGCATTATTTTCTGTTT
CTTCTCCTTAGTAAGGTAGGTGATGCAGAGGTGTGCATTTTGACGAGTTACGTGAAGGGC
TCTGAACGACGCCTTCACTGTCACCTTACTGTCTGTTCCTTCTTGCTGCCGACCTGGTAC
CAGCCAGTAGTCGAGCTGTATGTCGAGCGGCTCGGCGCGGTGCAGGGCGGGAGCGAGGTC
GACGTGCGGGGCGGGCGTGCCGGGGGGCGAGGGCCGAGCGGGGGGAGACCCGCCCTCCTC
CAGCTCCAGGGACGACACGCCACCCTCGCTGCAACCTATTCGCACCTCTGCTATGAACGG
AACGAACGTTTGACTAGCGTCCTCGTCTCCTGATTTATCTCTGTAGGCAACCATAGCCTC
ACCTATGGGTATATTAACGACTGGACCGATGCTGTTTAGATACCTGGCGATCCTGGAAGA
CATCTCGGTGATGTCCGGGGGCGACATCTCGGCGGCGCGCTCGCACAGCGCCGGCCACGA
GTCGCTCGAGAACAGCGCCGCGTATCCGGAATCGTTCGCAGACAGATAACGTGACACCGT
GTTTGCACCTGTGGGTATGATGTAGAAGCGCACGGGCGGCGCGTCGTGCGGGCGCCGCGC
CGCCAGCTCGCAGTGCGCCCGCAGCGCGCTCGCGCACGCCGCGTCGCCGCCGCACACCGC
CACGCGCATCCACGAGCGACGCGAGCTCTGTTTGACGGGTCTGGAATACAAAGCTTGCAG
CAGCGGCCTGACGTCGGGCGCATGCGGCCACGGCACCACCACGGTGGGCACGGCCAGCGC
GTGCAGTGCGGTGGCCACGCCGCCCGCCCCCACCACCGCCACGCACTCCGGGGCCGGACC
GTCCTCCGCCAGGAGCCGGGAGATCTGCTCCATCATCGTCCGACGTGGCTCGAGTGTAGT
TGGGCTGTGTACCGGCAACTCGTGTGCGGACAGAGGTCGGTCCATTCCACTGACGAGGGA
GTTCTTCTTGCGCCCCGCTGTGGCCGGGGTCAGGTTGCTACCGCTGGTCGCACTCCGGAA
CAACCTAGATCTCTTATCCTCCTTAGTCTCGTTGGGCGGCGAGCTGGACACGCTAGCCCC
GGAGACTGGGGCTTCGACAGTGACGTCACCGTCGCTGTTGCCGTCGCTGGCGCGCTCGTC
GCCCGCGGAGCTGCGGATCGCCTCCGATTCTGCGAACGGGACGGTAGCGACGTTCCGTTC
TCGCACTGCGCTCAGCTCGGCGGCGGACGCGAGGCTCGCGTGTCGCGTCACTGCGCATGC
GTACGTACGTACCTTTATAACGTGCGTGCACCGTGTGGAACGTGCACTTCATAATACCAA
TCAATT
(3726 bp)

- SilkBase 1999-2023 -