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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40579_c2_seq2
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_catenin_alpha_isoform_X2_[Amyelois_transitella]
Ontology
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005913 C adherens junction
GO:0005914 C spot adherens junction
GO:0005915 C zonula adherens
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007155 P cell adhesion
GO:0007163 P establishment or maintenance of cell polarity
GO:0007293 P germarium-derived egg chamber formation
GO:0008092 F cytoskeletal protein binding
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0016342 C catenin complex
GO:0030054 C cell junction
GO:0030055 C cell-substrate junction
GO:0030720 P oocyte localization involved in germarium-derived egg chamber formation
GO:0034332 P adherens junction organization
GO:0045296 F cadherin binding
GO:0051015 F actin filament binding
GO:0060323 P head morphogenesis
GO:0060429 P epithelium development
Transcript
Level		FPKM:14.82 TPM:11.71
ORF EntryO_BomoMG19224_complete:A_BomoMG_comp40579_c2_seq2
Sequence
(Nucleotide)
GGGTCATCGTATTGATGTTAGAATTGTTAGACACGCCTAGAGCAATTGTTTTCCATTTTA
CCCATTTCTTGCCTTTTAAAATTGTGTTATTTTACGAATTTAATTAAAAATAAACTTGTT
TTTTATTGAAAAAGTAGTGTTAGTGTCGTATTTTCATTGCAACGGTGTGAAAACAAGTCA
ACGATGGCGACTATGACGGATCAGTATGGCACAACAGGTACCTTGTCCCTGAAATGGGAT
CCTCGCAACTTGGAGATCAGAACCATGTCAGTGGAACGCACACTGGAACCTCTAGTGCTC
CAAGTCACTACCCTAGTAAATAACAAAGACCGGGACGCCAAAAAGAAGAGACCTGGCAAG
TCAAAGCGTGCGAGCGCATTAGTGGCTACTGTGGAACGAGCCACGGAGATCTTCATAGAA
CGAGGTCAGACCATAGCCTATGAGAATCCAGAGATCACTCAGCAGATGCTGACGGCTGTC
GAAGATGTAAGGAAAGCCGGAGCGACAATGAGCGTCTCGGCTCGCGAGTTCTCGGACCAG
CCGTGCGCTTCCTCGGTGCGCTCCGGCATGGTGCGCGCGGCCCGGGGGCTACTGTCCGCC
GTCACGCGCCTCCTCATCCTGGCGGACATGGTGGACGTGCATCTGCTGCTGTCCAAGCTC
ACTGCGGTGGAGCAGGATCTGGACAAGTTAAAGGCTGCGTCGTCCCAGTCGGAGGTGGTG
GAGCTGGCGCGGCAGTTCGGCCACTCCGCCGCGCAGCTCTCCGCCGCGGCAGGGAAGCGG
CAGAACGAGCTCAAGGAGCCCCGCATGAAGGACGAGCTGGCCGCAGCCCGGGCCGTGCTG
AAGAAGCACTCGACGATGTTATTGACAGCCTCTAAGGTGTACGTGCGCCACCCGGAGCTG
GCCGCGGCCAAGGCCAACCGCGACTACGTGCTGCGCCAGGTCTGCTGCGCCGTCGACACC
ATCGCCTCCGTCGCCAAGGGACAGCCACTGCCCGACGGGAGCAGCCGCGCGACAGACGGC
CCTGGGGAGCTGGCCCAGGCCCTCGACGACTTCGACGAACGTATGGTCATGGAGCCCTTA
CAGTATTCGGAGCTGCGCACTCGACCTTCGCTGGAGGAGAGGCTGGAGTCCATCATCTCC
GGGGCCGCACTCATGGCCGACAGCTCGTGCACCAGGGACGAGCGGCGCGAGCGCATCGTG
GCGGAGTGCAACGCCGTGCGCCAGGCGCTGCAGGACCTGCTGCACGAGTACATGGCCAAC
GCCGGCAAGAAGGAGCAGTCGTCGGGGCTGGAGCGCGCCATCGAGTCCATGTGCCGCAAG
ACGCGGGACCTGCGGAGACAGCTGCGCAAGGCGGTGGTGGACCACGTGTCCGACAGTTTC
CTGGAGACGAACGTGCCGCTGCTGGTGCTGATGGAGGCGGCTCGGAACGGCAACGAGAAG
GAGGTCGAGGAGTACGCCCTCGTGTTCACGGAGCATGCCAACAAACTCGTCGAGGTGGCG
AATCTGGTGTGCTCCATGTCGAACAACGAGGACGGTGTGAAGATGGTGCGCCACGCCGCC
GACCACATCGAGGCGCTGTGTCCGCAGGTGGTGAACGCGGCGCGCGTGCTGGCGGCGCGG
GCCCGCTCGCGCGTGGCGCAGGACAACGCCGCGGCCTTCGCGCACGCCTGGGAGCGCGCC
GTGCGTCTGCTCACCGAGGCCGTGGATGACATCACCACCATCGACGACTTCCTCGCCGTC
AGCGAGAACCACATCCTCGAGGACGTGAACAAGTGCGTGGTGGCGCTGCAGGAGGGAGAC
CCCGACTCGCTGGAGAGGACCGCCGGCGCCATCCGGGGGAGGGCCGCCAGGGTATGTTCC
GTGGTGACGCAGGAGATGGACAACTACGAGCCCTGCATCTACACCAAGCGCGTGCTGGAG
GCGGTCACCGTGCTGCGGGACCAAGTCATGTCCAAGTTCGCGGTGCGCGTGGACGCGGCC
GTGTCGGCGCTGGGAGGCGGCGCCGGTGGAGCCCTAGACGAGAACGACTTCATAGACGCG
TCTAGACTCGTCTATGACGCCGTCCGGGAGATACGCCGGGCGGTGCTCATGAACCGGGAT
GAAGAAGATTTGGATCCCGAAGACGTGGATCTAGATGAACAGTATACTCTGGAGACGAGA
AGCAAATCGAGCGCTCACACGGGCGAGCACGGAGTCGACGAGTACCCGGACATTAGCGGC
ATCACTAACGCCAGGGAAGCGATGCGTAAAATGACCGAAGAGGACAAGAGGAAGATCCTG
CAGCAAGTCGAGCTGTTCAGGCGCGAGAAGATGTCGTTCGACAACGAGGTCGCCAAGTGG
GACGACGCCGGCAACGACATCATCATGCTCGCCAAGCACATGTGCATGATCATGCTCGAG
ATGACAGACTTCACGAGAGGTCGCGGCCCCCTCAAAACCACCATGGACGTAATCAACGCC
GCCAAGAAGATATCCGAAGCCGGAACCAAACTGGATAAGCTGACCAGGGAGATCGCCGAA
CAGTGTCCCGAATCCTCTACTAAACAAGACTTGCTCGCCTACCTCCAACGGATCGCTCTG
TACTGCCACCAGATACAAATAACCAGCAAAGTGAAGGCGGACGTGCAGAACATATCAGGA
GAGCTCATCGTGAGCGGGCTGGACAGCGCGACGTCCCTGATCCAGGCGGCCAAGAACCTG
ATGAATGCGGTCGTGCTCACCGTGAAGGCTTCGTACGTCGCCTCTACCAAGTACACCCGC
CAGGGGACCATCGCGTCTCCGATAGTGGTTTGGCGCATGAAGGCCCCCGAGAAGAAGCCC
CTCATCAGGCCCGAGAAGCCGGAGGAGGTGAGGGCGAAGGTCCGCCGCGGCAGCCAGAAG
AAGCAACCAAGCCCGATCCACGCTCTGGCGGAGTTCCAGAGCCCCGCCGACAGCGTCTAG
GTACAAAAATCGATTGAAATTAATATCGAAAATGTATTAAACAAAAAATTATATGTGATT
ATTATTATGACATTTTAGTATTAAACTTTTTAGTATTATATCTAATATATCAAAAATAAA
AACAGACTGTTTGTTTGTCACGAATTCTCGTCTCGATTAAACCCGAATATGGATATAGGG
CTATAAAGTTAGTGCATACAACAGCTTAGTTCTCGTATAACCTCCCCGTGTGACATATTA
TATTGTACTAGTTTGACAAGAGCATCGGATTGTGCGTGCCGAGCTGTGGACCGTGGACTC
CACGTGTACAGGCCCTGATATACACAACATACAGAGCGGGTTTCGATTGAAATCAAAGAA
ATTTACATTCA
(3311 bp)

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