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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40578_c0_seq1
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		Putative_U5_small_nuclear_ribonucleoprotein_200_kDa_helicase_[Papilio_xuthus]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003724 F RNA helicase activity
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0007067 P mitotic cell cycle
GO:0007419 P ventral cord development
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0030532 C small nuclear ribonucleoprotein complex
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:0.00 TPM:0.00
ORF EntryO_BomoMG19202_3prime_partial:A_BomoMG_comp40578_c0_seq1
Sequence
(Nucleotide)
TATTAAAATATAAAAAAAAACTCACCTCTTCGGGTATCTTCTTAAACTGTCTCAACGGCG
ACATGGACTGCCACATCCTTCTGTCCACCATCTTGCACAGCGCCAGTGTTTTGTCCACCA
GCTGCGCCCAGCCTCTGTACAGTACAATCTCGAAGATGGCCCTGAGCAGCCTGCAGGCGG
ACTGCGTGACGTACACCATGTCCGCCATCAGCGCGAACCCCTCGAGCTTCAGCTGCGAGA
TGTACGCCTGCAGCAGCACGTTGATCTTCGCCGAGGACTCCTCTATGCTCTCCTTTATAG
GGATCGGCACCCTCTCCATGAGCTTATGCAGCTCCAGCTTCTCCTCCTCGCGGACGGCGA
TGTGCTTGAACTCGGCGGAGAGCGAGAACACGCGGAACAGCTCGATCTCGCCGAGCGTCG
GCTTCAGCAGCTGGTTGTACGACTGCATCGTCTCGTACGTGCAGTAGAAGTGCGAGGCGA
TGCGGCCCAGCTCCGTCGGCTGGAAGTGGCCGGACTTCTTCTCGTATTTGATCAGGCCGG
CCTTGTCCAGTAGACTGGCGGCGGTGTGCACCAGGTCGGCACGGTGCAGTTCCAGCAGAT
TGTCGTCCTGCATCTTCTCCGGGGAGACTCCGTACAGCGCCGGCTGCCTCAGCATGCGGA
TGTATAGATACGTGTAGCCCAGCCACGTGACGGCGTCCCGGACGCTCTGCACCGAGCCCA
GCACGATCTCCGCGTTCAGCATGTCCGGCAACTTGCTCACCAGCTGCGACTCTATGGGCA
GCTGCTGGTTCAGCAGCGACAGGTAGTACTGCAGCTCCGAGTGGTTCGTTATCAGGATGC
CTTCTCCCTTGGTGTCGTACTGCGGTCTCCCGGCGCGGCCTAGCATCTGCAGCACGTCGA
GCGCGCCCAGCTCTGTCCAGCGGCCCTTCTCGGGGCAGTACACCTGCGTGCCCTTCACGA
TGACGGTGTGCGCGGGCAGGTTCACGCCCCACGCTAAGGTCGCCGTCGACACCAGCACCT
GTATGTGCCTATCAGCGAACAGATCCTCGACCAGCGTCCTGTCCACCCTGCTCATGCCGG
CGTGATGTATGGCGAAGCTGTACGGCAGCAGCTCCCGCAGCTCAGGGTTCTTGACCTGCT
CGGCCTCAGTGCGCAGGACCTCCATACTAGCCGACCCCTCTCTCAAAAAGTGTCCAAGCG
TGTCCTTCTCGAGGCACATGTCGCGGATCGCGCGCGCCGTCTTCCCGGTCTCCTTGCGCG
AGTGGACGAACACTAATATCTGGTTCTTGCCTGCGTGCTCCATCACCTTCTCGTAGACGA
TGTCGTTCATCACCTGGAACCGCTTGAGAGCCTTCTTCTCCGTCACGCCGATGTACTGCT
GCTCGAGGGCCACCGGTCTGAAGGAGTTGTCGAAGTAGAAGAGTCCCTTCTCGGGTCGTA
CGCGCAGGAAGGTGGCCACGTCCGTGTAGTTAGGCAGCGTGGCGGATAGGCCCACGAGCC
GCACCTCCTCCCGAGTCTGCTCGACCGTCCGCAGGGTCCGCGCCACCAGCGCCTCCAGCA
CGGGCCCGCGCTCGTCGTGCAACAAGTGGACCTCGTCTATGATTATAAGCCGGACCAGGT
TCGTGAAGGAGCGCTCACCGCCCTTCCTGGTGATGATGTCCCACTTCTCCGGAGTGCACA
CGATGAGCTGCGTGGCCTCGATCTGCTCCCTCGTGAGCTGGTGGTCGCCGGTCAACTCGG
AGACCTTCATGTTGTAAGCGGACAGACGCTTGCTGAAGTTGCCCACCATTTCCTGCACGA
GCGAGCGCATCGGCGCGACGTATATCATCTTGAAGTCGTTGACATTGACAGTGCCGTCGT
CGTTGACGTGCTTGCCGACCTCGCGAAGCACGCACAGCAGCGCCACGTTGGTCTTGCCGG
CCCCGGTGGGCGCGCACACCAGCAGATTCTCGTCCGACTCCAGCGCCGGCTTCGATATGC
GGCTCTGTATTCTATTCAGGGTCTTGAATCCCTCGAACGCTGGCTGGACGTATTTGGGCA
GCTTCTCGATCGGCACTAGTGTCTCGTTTTCTTCAAACGGCTTCGGTTTCAGAGCCGGCA
CGTGGACTTCTTCGTAACCTTTCCGCTGCTTCCTGAATGAACCCGGTGGCAGCTGGCACC
TCTTGTTGGCCATGAAGTGCGATCCAGCCGCGAACACCAGGTCCTCGAGCTGCACCACCT
TCCTAGAACCCGCTACCTGCCCAGATGTAGAGCTGCTCTCGGCTTCAGATTTGTGCCTCT
TTCGAGGGGCCTCAGAGTGAGTATCCATTTTCTCATCATCTCCATTGCCGGTCTCCAATT
GCGCGAGGATCTTCTGCAGGTGAGGCTGCCGGGACATCTCCTCACGTATCGACACGCGCT
CGCTCTCCGACTGGGAGGACGCCAGCTTCGTGCAATACAGGATCATGAACCTGTACTTGT
TCAATATCTTGACGAAGTCGAAGCAGTCGTAACCGAGCAGCAGGACCAGCCTGTTCTCCA
GGTCTCTGTCGTCGGCAGCCTCGGCGAGCGCCTTCAGCACGTCCGTGGATTTCGCCTGAG
ACAGCATAGCGTCAGGAAAATGTCTGGACAGTCGTCTCTGCAGCCAGTAAGCATCTATAT
CCATCGGATGCAGAGACTGTGAGTGGCGTTTGTTAATTTGCTCCTCGCTCAGATTAGTGT
GAATGGCATTCCTCTTCCCCTCTGTATCACTGTCCTCTTCTCCGCTGGATTCTTTTTCTT
TCTCATTCTCTGACCCTTCACCATCTTCTTTATCTTCTTCTCTTACCTCCCCATATGCAT
CTTCATCATCTTCCTCAGAGGACTCTTCAAACTGCACATTGATGCCGTATGTCTCGTCTA
TTTCGGTGTTGCTCTCTGTTGCCGTGGTCATGTTGAAGTCTGTTATTTTCTTGCCTAAAT
TGACAAGTAAAGCAAATCTCTCGTCTGGTATGGAACCGAGGAGCATCTCAATTTCCTTCT
TCTTCTCTGGATCTTTCAATTTATCGTTCTTTAGAACTAAGAGTACCTCATCACAAGCGC
CGCATAATATATCCCTTGGCTGGTCTCCGAGAGAGCTCTGCATGAACGCAAGCAGTAGTT
CATAGGTATGTCTAGTGTGTTGGGCTCTGGGACGGTATAGAACGCCTGGAGCATCATCAG
CCCAAGCCACACGACTGGATTTTGATTTAGAGAGTTCGTAGGAGGCTTCATCACGTTTTT
GACGCTTAGCCTTTCTCTCCTCAGCTTTATCTGGTTTAGTGCGTTGAGCTCGATCACCCA
TCTTAGTTCCTGTGAGCTTTCCAGACAGCGACAAAACTTCACCGGTCGCTTCATCTCGAC
CACGTCTCTCTATTAACCTTACATCAGCTTGCAGTACAAGATTCGAGTTGGCCTTGTACT
CATACTGCAGCTGTCTGGCAGCCGCGTCAGCCATGCTTCACTATATACAAGAATGTAGCT
TTACTCTTGTTATTTGACAAAAAATGCAGGAAGGTATTTTAAATTCGAAATTACAATTTA
AAATAACACAGTTTAAGGTTAGACCGCCGC
(3570 bp)

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