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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40554_c0_seq5
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_ATP-dependent_RNA_helicase_dbp2-like_isoform_X2_[Papilio_machaon]
Ontology
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0016787 F hydrolase activity
GO:0042254 P ribosome biogenesis
Transcript
Level		FPKM:19.21 TPM:15.18
ORF EntryO_BomoMG18982_3prime_partial:A_BomoMG_comp40554_c0_seq5
Sequence
(Nucleotide)
AGATTCTGTACTTCTCGGGGCCACGTAGCTGACCACATCAATACTTGTCTATCAGGTCTA
ATCTGTTCAATAATCTTCCTGATCTGAGGCTCGAAGCCCATGTCCAACATTCTATCAGCC
TCATCCAGCACCAAATAAGTGCATCGGCGCAGGTTCGTTGTCTCCTTCTCCAAAAAATCA
ATGAGTCTACCAGGAGTAGCAATAACAATTTCCACTCCCCTCTCAAGACATCTGCCCTGT
GGTCCCTTTGGAGCACCACCAAAGATACAAGTGTTCCGCACGTGGATACTTTGACCAAAT
TCATTGGCAACCTGCTGTATTTGTTGGGCTAACTCTCTTGTTGGAGCCAACACAAGGACT
ATTGGACCATCATCTCTTAGCAGACGCGGTTGATTAATTATGTGTACTATGGCTGGTAAA
ATGTATGCCAAGGTTTTGCCTGACCCAGTTTGGGCTATGCCCACCATGTCACGGCCAGAG
AGAGCTATTGGCCAGCCCTGTGCTTGAATAGGAGTGGGGTTCGGGAAACCTTGTTTTAAA
ATCTCTTTCATAGCATAGTCAGGGAAACCACCCTCTTCAAAAAATATGCTAGGGGCAGGC
ACGTCTCGACCTTTCACAGTTATCTGATGTTGGCTACGATAGGCCTCAATTTCGCTTTGA
GTTCGACGTTGAACATTCGGATGAGGGACATAGAAATTTTTCTGGAATGGTGTGAGCGTT
ACGGTGTCCCAGTGAATTTTTCGAAGGTTACCGCCAGGCTGATCATTTTTGAAATTGGAG
CGATCATCCCGATTCCCCATTCTCCCAAAACCCCTGCCGCTGTCTCGTCCTCCACGGCCG
CCATCCCTACCGCCGCGTCCACCGTCCCGACCACGACCTCCGCTAAATCGACTAGGTCCG
CGCTCTTGCGACCTGTCGCTACCCCGACCACCGCGGCTGGATCCTCGCCCTCCGCGACTC
CCACCTCTTCCACCACGGCCACCACGTCTATCGTCATACATGATGCTAGCTTATATGAAG
TAGTTTAACTACCACTCTCAATTTACTATTTAGAGTAGGTACTTTGGTTGCAATTATATT
ACGTTTAAATTAAGCAATTATTGATAAACACAGTCGCAGACATAGCACAACTGATGCCAA
AGCCAAACGAGCGCCATGTTAGT
(1163 bp)

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