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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40549_c0_seq1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_tyrosine-protein_phosphatase_non-receptor_type_23_[Bombyx_mori]
Ontology
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0006470 P protein dephosphorylation
GO:0006810 P transport
GO:0010633 P negative regulation of epithelial cell migration
GO:0015031 P protein transport
GO:0016023 C cytoplasmic vesicle
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0019901 F protein kinase binding
GO:0030030 P cell projection organization
GO:0030334 P regulation of cell migration
GO:0031410 C cytoplasmic vesicle
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0036064 C ciliary basal body
GO:0042995 C cell projection
GO:0043162 P ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
GO:0060271 P cilium assembly
GO:0070062 C extracellular exosome
GO:1903387 P positive regulation of homophilic cell adhesion
GO:1903393 P positive regulation of adherens junction organization
GO:2000643 P positive regulation of early endosome to late endosome transport
Transcript
Level		FPKM:10.92 TPM:8.63
ORF EntryO_BomoMG18938_3prime_partial:A_BomoMG_comp40549_c0_seq1
Sequence
(Nucleotide)
TAAAATTGTTTGTGATGAAATTGTCGTTCAAGTGAAATTTCCTTAACTACGTTTCTAATC
GAAGTTAGCTTCCATTAATTATGGAAGCGGTACCGAAGATACCCCTTATCAGTTTCGAAT
TAAAAGTATCAACAGAGAATACAAAATTTGGAACAAAACTTAAACAGTACATTGCCGAAG
TTTATAAAGAAGATCCAGAAAGCTACAGTAATGAGATTCATTCGCTCGAAGGGCTACGAT
CGGCCGCCGTGAGGCCTACAATGGATACGGCAGGCTTGAAATCTTTAATTAGATATTTTT
GCCAACTTCGTGCCATGCAAAGCCGATTCCCAATGAGCAAAGGCCAGCCGGCGGCTTGCA
ATTTCACTTGGAAGGATCTCTACGCAAGCATGAATTGTACCTCAGCATCTGCTAGGTTTG
AATTAGGATGTATTCTTTACAATATTGGTGCCCTAAATACCGAACTTGGTGCAATGGAGC
CACGTACCACAGCTGAAAGCCTGAAAGCCACTTGCACTCACTTCCAGCATGCTGCATACT
CATTTCAACTCTTGAGAGAGCAATTTACTCAACCTCCAGGTGTTGATATTTCCTCAGAAA
TAATGAGACTTCTCCAGGAAATTTGCTTAGGTCAAGCCCAGCAATGTATTCTAGAGAAGA
GTATACAAGATACAAGAAAGCCCCGTGTTATTGGAGCAGTAGCAATACAAGTTGTTTTAT
TCTGCAAAAATGCTCTGGCTTTACTTGGACCGTCCACTGGTTCAGAAAATGTTTATGAAG
TTGTTGGTATAACCCTGTACAACTATTGGTATCGGTCCCTTTCTTTTAAAATGTCATTTG
TTGGATCTATTGCCTGTCTGTATCAAGGAATGCATGCTGAAGAGCAGCAGAAAATGGGTG
AGAGAGTTGCCTTTTATCAACTGGCAGCTGAAAAACTGGCAGAAGCCAGGAAAATTGCCA
AAAACATGGACTCCAACAAGGTGATTTTGGAAGCTTTGAACTTTATGAACGACGTTATCG
AAGGCAAAAAGAAAGCAGCCAAGAATGAAAATGAATTTATTTATCATGAGGAGGTACCTG
ACAAGGACATGTTAACGGAACTAAAACCAGTGTGTTTGGTGAAACCATTGCCAATTAACT
TTAATGATCCTGAGTTGTCAGGTTCGGACCTATTCGCTCGCCTAGTGCCGATCGCGGCAC
ACGAGGTGTCCTCGGTGTACTCCGAGCAGAAGGCGAAGCTGCTGCGGCACGTGATGACCC
AGATCGACGCCAAGAACACCGAGCTAACGGAGTTTATGTCGTCACTGCAACTCGATCAGC
TCGATGTGCTGGATTCGGAACAAAAGGTGCCTCAAGATATAGTCGACCGGTGTGCGGCGA
TGAATGCCAAGTCGGAAATAATACAGTCACTAGTTGATTCGATGAACAGTCTGGCCGAAA
CTATCAGCGACGTGGAACACTCGTTGGGAGAAATAAAAAATCTCATACAGGAGGAAACAA
TGAAAGAGAAAGAATTCCAAAAGTTAATGGGTCCACGACCGCCATCTATCGTTCAAACAG
AACTGTCCCGGGAATACCACAAGTACCAAGAAGCACACACAAGGACCAACGAGAGCAACC
AAGTGTTGCACAAGGCCATGACGCTACACATCGCCAACCTCAAACTGTTGGCCCAACCTT
TGGACGTGCTGCAAGAGAAGATACCAAGCATTGACAATATTGAAGGTCTGGACCGCGAGA
CGATGTCGGAGATGCGTCGCGTGGTGGGCAAGGCTCGCGAGATGCAGGCGCAGCGGGACG
CGCTGGTGCAGCAGCTGCGGGACG
(1824 bp)

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