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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40548_c0_seq2
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		PREDICTED:_cold_shock_domain-containing_protein_E1_isoform_X2_[Bombyx_mori]
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0005743 C mitochondrial inner membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006355 P regulation of transcription, DNA-templated
GO:0044822 F RNA binding
GO:0070937 C CRD-mediated mRNA stability complex
GO:0070966 P nuclear-transcribed mRNA catabolic process, no-go decay
Transcript
Level		FPKM:2.20 TPM:1.74
ORF EntryO_BomoMG18930_complete:A_BomoMG_comp40548_c0_seq2
Sequence
(Nucleotide)
CAAGCACACTATAAAGAAGTCCAATCTTGCCTCAAAAATACCTCATACGCGTTGCCTGAA
AATTCCTCAAAAATTATCCCGCGGTTAGGGCGTTAAGAACTTACTGGAGGCTGTCGGGTC
GGACTGCCGGTGTTGTTGTACACTTGAGCTTCCTTGGTCACAACACCTCTGACGCCGCGC
TCGATCAGAGTCTCGAACTGAACCGTGCCCGGCGAGAGATGCTTGATGCGAATAGCTGAT
TGCCGCGTGTTCATGTTCGAGAATGTCGATAAATGGTCAACGGTAAACTCCACCTCATCT
CCAACGGTGAGATCTTGTCCTAAGCGAAGAACCTCGGCGAAATGAAAGAACATAGTCTGT
TCTCTTTCCACGCAACGGATGAATCCGAACCCTTCCCGCAGAGAGCACACGAGGCCTTGC
TCCCGCCGTTCGCCAGATACATAAAAAGATTCATCGAGGAGAGAAATATTAGTGGCGCGC
TTGAGCTGATCACGACGATCGGTTGCAACTTGAAACTGCACCCAATCTCCGTGTCGGAGC
GTAAACTCACCACACTGGTCTTTATCTCCAAAGGGGACCTCAACTTCAGAATGATCTGCA
GCACGGTATCGGATGCGCCCAGGGAGAGGATCGTTCTGTGTTGCACGCACCAAGTTACCG
CGTTCCAAAGGCTTCAACACCTGACCACGCATTATTTCAGGACTTACATCTTCAAACACA
ACTGAACCACTTGGTAACTTAGTAATGTTACATGCCACTTCTTTGCCATTTCTAGTTTGT
ATAATAAACTCGACATCATCACCGAGAGTCAATTCTTCTTTACATTTAGTTTCAGAAAAA
TGAAAGAATATCTCTTTTACAACATCGGCACGTTCAATAAAACCAAAATTTTCTTTCATG
GAGCAGACAACTCCATGATATTTAACTGGATGTACGGGGTTCTCAAAACGTATATGACAA
GCACCTAATGTTCCTCTTTGATTAGTTGCAATTTGAAAGCTGACAGCATCTCCAGTGCGT
AAAGTGACATTCCCTTCAACATCATCTTTTGTATAGGGCAAGAAGAAACATTCTCCACGA
GTTTCATAGGATATTCTACCTGTATTATCACCAGATCCTTCACCTTTTACTTCTGTTGTT
ACAGTGCCTGTGACTCTAGCTTCGCTTAATACCACTTCCGGTGCAATTTTAGTGACTGTT
GATGCAATTGGTTTGCCTGTTCGACGATCATAAGTCATTTCAAATTCCACAGGGTCACCT
ATTTTAAGATGTTCAGTATTACCACTGAACTGACTGAAGTGGAAAAAAAGACGGGCTTGC
CTCTCACAGCATTGTATGAAACCATAAGAATGGAGAAGTTTTTCAATAATGCCGGTCTCT
CTAATAGGTGGGTGATTGACTGAGTCATATTGGGATGAACTGTTATTGGTTGAAGAAGAT
GAATATGCTGAGTCACCCATTGGACATCCATCAGCATTGTATCCACCTGAGAATCGGTTT
CCACCACTTGATTTGGAACCACCATTATAATTATCCCGAGGAGAACTTGGGTACTCACTG
CTGTAGGTACCATTACGATACGAAGATTTGTGCTGCATGTTGGAGTGCTGGAGATCTAAA
ATATCTTGCAGGGGAGATGAGTGTGAATCTGGCGGTTGGAACATTTTCCACTGAGGATTA
CTAGACATTATATTTTTCTTAGGTTTTTTGTATAAGAGTCAAAAATCTGTTTTATTACCA
ATATATCACAGTTAATTTTATGGTGTCACAATTTAATCTACAGCGATTACAAAGCTTTAA
TCAAATCATATTTATAAAGTCTGCGTTCACGCGAACATAATGTACCAATGCGACTGTGAC
CATTTAATACACACCAAAACCACTATTGTTGCAAAATAAAATTATGTACTTTAAATTGTG
TTAAGCTAAATCCTCAGATGTCTTCAATGCTTGCTGAATCGGAGCTCCGTGATGCATTGG
CTCGGTTGCAGACAATAATAAAATCGTGTTGCTATCTGCACGTTTGTAAGTCGATATTCA
CAAGCACGACACAGCATAGCACTGACGACATACCGCCATATTGAATGTCAA
(2091 bp)

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