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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40515_c0_seq5
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		putative_ubiquitin_specific_protease_[Danaus_plexippus]
Ontology
GO:0001501 P skeletal system development
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006281 P DNA repair
GO:0006282 P regulation of DNA repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0009411 P response to UV
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0035520 P monoubiquitinated protein deubiquitination
GO:0036297 P interstrand cross-link repair
GO:0036459 F thiol-dependent deubiquitinase
GO:0042769 P obsolete DNA damage response, detection of DNA damage
Transcript
Level		FPKM:0.32 TPM:0.25
ORF EntryO_BomoMG18718_complete:A_BomoMG_comp40515_c0_seq5
Sequence
(Nucleotide)
ATTATATTAACACAAATAAACTAATGTGCGTTGTATAATAAATGTTTATAAAAATTACGA
AACCTTAGCATATCTTCATAAAAAACGTGAGGTTGAATTTATTGATGGAAATTTGTGCTT
GTCGACGACCATATTGAAATGTCGCTTTTTCGCAATATTTACTATAAACATATCAAACAC
CGTAATGTATCAAGATTGTTGTGTTTCCTAAGAGAATTTTCTCTTTTGATCTCTGGTTTC
TTTTATGACATTAAACAAGATTGTTATCTTGTCTATGACTTAAGAAAAGAATTTGTTTTT
GAAAAACGAAACGAAATGAGGTAGGTATGTAACTGGTACATACTAGATGCTGGGGCACAT
TATGTTCTGCGGTTAAGTTTCCTGGAATTTATACATATTTTGATGAATGTATCATAAAAC
ATCAGAATTAATAGTAAGCCACAACCTATTAAGGCTTGTCATCCATAATTCATGTTTAAC
AGTAGTCTAAATAATATCAGCAGTTTATAAATTGTTTTAGTAGAACTGCTTACAATTCTG
AAATACGGCACCATTAATCAATTAGAAGTGCAAACAAAAGCTAGTTTCCATTAGATGTGT
TTGCTTATAATTTGTTTACAAAATTAACAAATAATTTAGGCCATTCATACATTTTAAAAA
TAGAAATTAAGTAGAAAAGTACAGAGCACTATTCAAATTAAGATAATGGGAATTAATGCA
AATTGTACTTTATCTATTCATTTGTCGTGACATTTTTTCTTCCTTGGATATTGTTGCCAC
AATCTATTCTGTATTTCATCTTAATATCAATAAGTGTAGTCAACTGAGGGATTTAATTTT
GTAAATTTTATGTGAATGCTACAATTAATATAGATATGGTAGTGGCTCAATGCAGTTGTT
TATAAAGATCTAGCATTCATAGAATTTTACCAGTTGAATGAACTAATAGTTTAATCTGTT
TAGAAGAAAAGTATGGAACCAACATATTATGAAGTTTATAAAAAAAAGGGCAATGTTAAG
TTGTCACCGGTGTAGTGTGTATTGCATTAATTTCCATTTTGTTACAGGGGTTGTTTACAA
ACTATTAAAAATACATATTTTGTCAGTTTGTAACAAGTGTGTGAACAAAATAATATTAAA
TTGTCTATTTATCTAACTAATAGCATTAGCTCGCTACAATCTTAATATCACTTCAGGCAA
ACAATAATAGTCTGTGCCTATCTTGTCTGTTACATGTCTTTTAAGCAGCTACAATTACAA
TGATCATGGCGCCCAATGAAAATAGGCATTTTTAGAGATATAAAAAAAAAAAATGTTTTT
GATAAATACTGTGAATGTTTATGCGAGGTCTTTAGACACTTTCTGCCTTATTCCAAAGGA
TTCCATAATAGTAATTTAGTTTTATTTCTTCAGTGAATTCGTTTCGCGATTTGGAGCCTC
TAGAACGCATGAGGGAAAAAATAAGATTGCATTTTTGATTGAAACAAATACTTACAAAAA
TATGGAGGTCTTACCAAAAATGTATTCAAAATGTTCTGAAATTATTGTCGAATCAAATCC
ACGTTAGAGTGCTCCTTCCTCGCAACCACAGTGGACATTCACCGTGAACACTGGGACACA
GCATGGCTGCAACTAGCCCACTTCACTTTTCACATAAAACAGGAGATAGGGAGTTGCGGC
AGATCTCATTTTCGGTTCAGCCGACAAGAGATCTTCGAATTCCTCATTCGATATGGGTTT
AACAAGTTCATCGTCACATGCGAGCCAGCATGGTTCTGTTCTAGGTCTTGGGACGCAACA
TTCCTTAGCTGCACAGCCAGTGGGCGGGTGGCGAGGTCGGTTGAAGAGCGTCCTCATGAA
AGAAGACGAGGAGGTTGTGGTGGCATCACCGCTACCTTCACGAGAGCACTTGAAGTCACA
AGAACTATCGCGCGCATAAGCAACGTAATGCCCGCCTGTTAGGGTCTGACCGAGGTGCAT
TATCACTGCCCATAGGATGTATCTGTGCTGTGGTGCACGCTCGGGCGGTCTGGAAGCGCA
AGGCTCACAGAAACAAGGCATAAGTAGAGGCGTCGGTGCATGTCTTGTTATCTTTTCCAT
TCCCCCGCTGAATCGTTTCAACTGTAGTACCAGCAACCGCGGCAGTCTCGAATAAGTGAC
GCTGCGACGAGCTTCGTTGTACCGTAGACAACGTTCGCACCAATACTTGTTCTGATCACG
CAGGTATTCTGTAGACAGGCAGGCCGCCCGGAACGGTTCCGCTCCTGGTTCTTCTTCGCC
AACCGGAACGCACAACTCACAAACAGCCTGCGCCTTCTGAGTGACCGCTTCACATTCTAA
GCACATGGTCCGCACTACCATCGTACCTTCAAAATCTTCAGCCACAAAGTCCCATCCTGG
TCTCGACCGCTCATCTTTCTCAGCATCCACAGGCGACGGTTCCCGTTCTTCAGTCGGAGA
ATTCCTTTTGTCGTTGATTGCCTTGATTTCTTTGCGTTTCTTCCACGACTTACGAAGATT
TCCTAATGTTGGTTTCCCGTTGTCTCCATCTAAGCTTGGCTGGCGGCCTATGCCGTTACT
GTCTCCGTTTTCGTGCATCTGTAGTCGAGCAGCGCGCGCACTCAGCGCTCTGCAGGTCTC
CCGTATGTTGTCCAAAATACAAACTAATAATTCATGAGCGTCCTGCTGTCGATTACCTCA
AAGTATAAAGCACACTATTGAGAAAACAAGTGTTCCCCAAATTGGACAGTGAAGACACAG
GCATCTTCTTCTGCACCCCTCCATATTGAGTGTCAGGAGGGTGGTGGCCATTCAACATGA
CCGAGCTTGATTCTCCCTCCTCCAGAATTGCTAGCTCTGGATTCAATGTTCTGTCTGAAT
GCTTTAGGGTTGCTGTGTCCCTATTTACTGTGGGACCTGCAGATTTCGATGATTCACTTA
GAGGCTTCAATTTTTTTGCTGCACTCAACGTGTTGGAATATATGCTTTTGAGCGGCCTCT
TTAATGGCTTATTCTCCTTGTTATTACCAGAACTGCATGGATCTGTATTCTCTTTAATAT
TCTCGTTATTTTTCTTGTTTTCGTTGCTCAAATGTGGCGCATTATTTCTGTTCAGTGATA
GTGAGAATCTTGGTTTATCGACACCTTTTTTCGTTTCGGTTACAAAATTAAATGGCATCT
TCAGCGCACATTATATTGTAAGGCAACGTTATCTCGTATAATAAGTACTCTGTTATTTCT
TAAAATTTGTTAAAATAAACTGCGAAGATCCGATAGGGATCCGGTAGGGATCGGTCGGC
(3299 bp)

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