SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40515_c0_seq3
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_1_[Papilio_xuthus]
Ontology
GO:0001501 P skeletal system development
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006282 P regulation of DNA repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0009411 P response to UV
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0035520 P monoubiquitinated protein deubiquitination
GO:0036459 F thiol-dependent deubiquitinase
Transcript
Level		FPKM:4.66 TPM:3.68
ORF EntryO_BomoMG18711_complete:A_BomoMG_comp40515_c0_seq3
Sequence
(Nucleotide)
ATTATATTAACACAAATAAACTAATGTGCGTTGTATAATAAATGTTTATAAAAATTACGA
AACCTTAGCATATCTTCATAAAAAACGTGAGGTTGAATTTATTGATGGAAATTTGTGCTT
GTCGACGACCATATTGAAATGTCGCTTTTTCGCAATATTTACTATAAACATATCAAACAC
CGTAATGTATCAAGATTGTTGTGTTTCCTAAGAGAATTTTCTCTTTTGATCTCTGGTTTC
TTTTATGACATTAAACAAGATTGTTATCTTGTCTATGACTTAAGAAAAGAATTTGTTTTT
GAAAAACGAAACGAAATGAGGTAGGTATGTAACTGGTACATACTAGATGCTGGGGCACAT
TATGTTCTGCGGTTAAGTTTCCTGGAATTTATACATATTTTGATGAATGTATCATAAAAC
ATCAGAATTAATAGTAAGCCACAACCTATTAAGGCTTGTCATCCATAATTCATGTTTAAC
AGTAGTCTAAATAATATCAGCAGTTTATAAATTGTTTTAGTAGAACTGCTTACAATTCTG
AAATACGGCACCATTAATCAATTAGAAGTGCAAACAAAAGCTAGTTTCCATTAGATGTGT
TTGCTTATAATTTGTTTACAAAATTAACAAATAATTTAGGCCATTCATACATTTTAAAAA
TAGAAATTAAGTAGAAAAGTACAGAGCACTATTCAAATTAAGATAATGGGAATTAATGCA
AATTGTACTTTATCTATTCATTTGTCGTGACATTTTTTCTTCCTTGGATATTGTTGCCAC
AATCTATTCTGTATTTCATCTTAATATCAATAAGTGTAGTCAACTGAGGGATTTAATTTT
GTAAATTTTATGTGAATGCTACAATTAATATAGATATGGTAGTGGCTCAATGCAGTTGTT
TATAAAGATCTAGCATTCATAGAATTTTACCAGTTGAATGAACTAATAGTTTAATCTGTT
TAGAAGAAAAGTATGGAACCAACATATTATGAAGTTTATAAAAAAAAGGGCAATGTTAAG
TTGTCACCGGTGTAGTGTGTATTGCATTAATTTCCATTTTGTTACAGGGGTTGTTTACAA
ACTATTAAAAATACATATTTTGTCAGTTTGTAACAAGTGTGTGAACAAAATAATATTAAA
TTGTCTATTTATCTAACTAATAGCATTAGCTCGCTACAATCTTAATATCACTTCAGGCAA
ACAATAATAGTCTGTGCCTATCTTGTCTGTTACATGTCTTTTAAGCAGCTACAATTACAA
TGATCATGGCGCCCAATGAAAATAGGCATTTTTAGAGATATAAAAAAAAAAAATGTTTTT
GATAAATACTGTGAATGTTTATGCGAGGTCTTTAGACACTTTCTGCCTTATTCCAAAGGA
TTCCATAATAGTAATTTAGTTTTATTTCTTCAGTGAATTCGTTTCGCGATTTGGAGCCTC
TAGAACGCATGAGGGAAAAAATAAGATTGCATTTTTGATTGAAACAAATACTTACAAAAA
TATGGAGGTCTTACCAAAAATGTATTCAAAATGTTCTGAAATTATTGTCGAATCAAATCC
ACGTTAGAGTGCTCCTTCCTCGCAACCACAGTGGACATTCACCGTGAACACTGGGACACA
GCATGGCTGCAACTAGCCCACTTCACTTTTCACATAAAACAGGAGATAGGGAGTTGCGGC
AGATCTCATTTTCGGTTCAGCCGACAAGAGATCTTCGAATTCCTCATTCGATATGGGTTT
AACAAGTTCATCGTCACATGCGAGCCAGCATGGTTCTGTTCTAGGTCTTGGGACGCAACA
TTCCTTAGCTGCACAGCCAGTGGGCGGGTGGCGAGGTCGGTTGAAGAGCGTCCTCATGAA
AGAAGACGAGGAGGTTGTGGTGGCATCACCGCTACCTTCACGAGAGCACTTGAAGTCACA
AGAACTATCGCGCGCATAAGCAACGTAATGCCCGCCTGTTAGGGTCTGACCGAGGTGCAT
TATCACTGCCCATAGGATGTATCTGTGCTGTGGTGCACGCTCGGGCGGTCTGGAAGCGCA
AGGCTCACAGAAACAAGGCATAAGTAGAGGCGTCGGTGCATGTCTTGTTATCTTTTCCAT
TCCCCCGCTGAATCGTTTCAACTGTAGTACCAGCAACCGCGGCAGTCTCGAATAAGTGAC
GCTGCGACGAGCTTCGTTGTACCGTAGACAACGTTCGCACCAATACTTGTTCTGATCACG
CAGGTATTCTGTAGACAGGCAGGCCGCCCGGAACGGTTCCGCTCCTGGTTCTTCTTCGCC
AACCGGAACGCACAACTCACAAACAGCCTGCGCCTTCTGAGTGACCGCTTCACATTCTAA
GCACATGGTCCGCACTACCATCGTACCTTCAAAATCTTCAGCCACAAAGTCCCATCCTGG
TCTCGACCGCTCATCTTTCTCAGCATCCACAGGCGACGGTTCCCGTTCTTCAGTCGGAGA
ATTCCTTTTGTCGTTGATTGCCTTGATTTCTTTGCGTTTCTTCCACGACTTACGAAGATT
TCCTAATGTTGGTTTCCCGTTGTCTCCATCTAAGCTTGGCTGGCGGCCTATGCCGTTACT
GTCTCCGTTTTCGTGCATCTGTAGTCGAGCAGCGCGCGCACTCAGCGCTCTGCAGGTCTC
CCGTATGTTGTCCAAAATACAAACTAATAATTCATGAGCGTCCTGCTGTCGATTACCTTC
AAAAGTAGAATTAACATCTCTAAGAGCAGCCAAGAAGGCATCCGCTGCATATGGCTCAGG
GGTAGCCTCAGAATTGGTGCTGTTCAGACATTTGTTCTCAGCTGCACGAAGATTAAAGTA
GGTCTCGTGAAGTTTTTCTGTCGCTATCTGTATTTTACTTTTTCCAGAACTATTATCTGA
CTGGCCTAATGACAACAAGTCCTTGCTACTCCATGATCTAGTCCCAGATGATACTAAGCC
CGCAGCACTCCGACCCAATGAAGAACTTTTGAGCCTGATGCTGCCCAACTTTTGCTCAAC
ACTGGCCAGATCTGACACTAAATGGTGAAGGTTGTGCAGGAACCGAGGTGCATACCTCAA
AGTATAAAGCACACTATTGAGAAAACAAGTGTTCCCCAAATTGGACAGTGAAGACACAGG
CATCTTCTTCTGCACCCCTCCATATTGAGTGTCAGGAGGGTGGTGGCCATTCAACATGAC
CGAGCTTGATTCTCCCTCCTCCAGAATTGCTAGCTCTGGATTCAATGTTCTGTCTGAATG
CTTTAGGGTTGCTGTGTCCCTATTTACTGTGGGACCTGCAGATTTCGATGATTCACTTAG
AGGCTTCAATTTTTTTGCTGCACTCAACGTGTTGGAATATATGCTTTTGAGCGGCCTCTT
TAATGGCTTATTCTCCTTGTTATTACCAGAACTGCATGGATCTGTATTCTCTTTAATATT
CTCGTTATTTTTCTTGTTTTCGTTGCTCAAATGTGGCGCATTATTTCTGTTCAGTGATAG
TGAGAATCTTGGTTTATCGACACCTTTTTTCGTTTCGGTTACAAAATTAAATGGCATCTT
CAGCGCACATTATATTGTAAGGCAACGTTATCTCGTATAATAAGTACTCTGTTATTTCTT
AAAATTTGTTAAAATAAACTGCGAAGATCCGATAGGGATCCGGTAGGGATCGGTCGGC
(3658 bp)

- SilkBase 1999-2023 -