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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40494_c0_seq3
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_protein_split_ends_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007379 P segment specification
GO:0007400 P neuroblast fate determination
GO:0007403 P glial cell fate determination
GO:0007411 P axon guidance
GO:0007422 P peripheral nervous system development
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0016055 P Wnt signaling pathway
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0035222 P wing disc pattern formation
GO:0035321 P maintenance of imaginal disc-derived wing hair orientation
GO:0048106 P establishment of thoracic bristle planar orientation
GO:0048749 P compound eye development
GO:0050832 P defense response to fungus
Transcript
Level		FPKM:7.77 TPM:6.14
ORF EntryO_BomoMG18558_5prime_partial:A_BomoMG_comp40494_c0_seq3
Sequence
(Nucleotide)
CGGAAAACAACATTACAAAACTAAAAAATGAATACACTCTCGTGTAGTATTTTTTTTAAT
AGTATTGGTAGGAGTTTACATACACAGGAATCTGGGTTGTTCGGGTAAGGGAAGTTTCGT
TACAATACTATCTTCATATTTACAAAATATACATTGGCTTACAGATACTTTCTAGTAATA
AAATCTATAAATATAATTATGATCACATTTTTTTTCTATAAATACGATGTCCAGACAAAC
CCGACATAGACCGCAGTACAAATCCGGAGGCGGCTGTTGCGCAACAAGATCAACTCTCGC
TCCACATTTGCTGCACACTTGAGATCAAATGTTTTTTTTTTACAAAATATTTTATACTAT
CATCATCTCTCACTCTTGCAACAGCCGCGGCCGAAGATGTACCGAGTAAGACTTACGTCA
TTCCATTCTCACGTAATAACTTCGTATTTGGGAATAGAATGAGATAGGATCAGAAAAAAT
ACTCTGATTTCGCAATGTCCTCAATGAGCCCTTTTTGAAGACATCCCGAAATGAAAGATA
TGTACAAACACAAACAATACAAAACTATGCTATCACTTACTTTCTATTTTATCGTCGAAG
GGAATTAATTTGGAATTACAAATACAGAAAGCAATAAGTTTGAAGTTCTACTCATAATTG
ACATTTCCTCATCTGCAGGCTGCGTGATCAAGCAGATTGTAATTTTTATAATCTTATAAT
TTTTACTCTCTTAATTTACGTTTCTAGTTTGATATTTAAAAGCTAGTATGCAGTACTGGC
GATGGCTTGAAAATTTATTTCTACTTTTACTTTGAATCGGCAAAATTTTGGAATTCATTA
TAAATAAATGAAATCTTAGTTAAATTAAGACAGTTTAAATTATGTTTCGAGAATTTTTAT
GAACAATATATGTGCAACTGCACAATATCTGTTTATTAAAAAATGTTCAATAAAGAGGTC
TAATAGCTTTTTTAGTTATTTTAGACTTAGCAATAACTTTATTAAGATTACTTGCCACTT
TCTCAGGTTAATAATGTAGGTCGTTTTACAAGGAATTCGAAAAGAGTATTTAGTAATGGT
ATTTTTTCTATTTAGAAGTAACAGTAATTAAAATACATATGATATAGTAGCTAGTTAATC
TCTTTACACTCGTATGTTTTATTCTTTAATTACATAAATTTATGTTATTTAAAAATTACG
GATACTTATGCAATATTTACAGAAAATTCCTTCATAAGGACTTACCATCCCTTTTCAATG
GGCTCTAGTTCAGTATTAAAATTGTAACGTATGTAATTTAAAATTAATGGACGAAGTTGA
GAGTTCGTTAATATTTCTTCTAGCGACATCAAAGTATTTGCGACGGAAACATGACACGAC
TTCATATTTTTTACCCTATACATTTTTTTTAAAACAATAATTACGTTCTGCACTATTATC
TTTAATACGTAGACTATTTATTACTTTACATAAAATATTTTGTACTTTAAATTTACGATA
GCAAAGTCGCACTGTAATTTTATTGTTGTAGTATTGAGATGTTAGCGACAAATTATTATT
AATTATTACCCACATGAAAAGTTATGGAATCTATCAATGTCATAAGTACAAAAATCTTTA
TCTCCTAAATGATCTTTTATCATTATTGCTCTCTGTACCATAATAATATGATAATTACAA
ATGCTCGTATATTACTGGCAACTAAGTCAAACGTAATTGGAATAGAAAATCATAATGGTG
CACGCGTTACAGAAGTAGCGGCCAGCCTATATAACACCACTGAAAGTGATAATATTCTCT
TTGAATTAAACAACTCTTTATATCGTAAAAACCTAAAGATTATTCATTACTTGATTTAAA
AATTATTTTCTTAATATTACTGCATGTCCGAATGAAGTTAGATTATTTTAGTGAAATAAT
TTAAATTAAATAATTTGTGAACGAAAGGCTTTGTATTATTTCAATAAATGGCCATCATCA
GCAACATTTTTCTTTTTATTTACACAGTTAAGTAACCTCGATTAATTAGCTTTTTTTGTT
CTTTTATTATTTAGATATATAAAAATTCTCAGATGATTTCTTCTTTTTATGGAAAATATT
AGTGAAATTTATACTTTTCATATAAAGGTATTTATTTCCGTAAAGACATGGCCGCTAGAT
CAATAACGTTCGTAATAGATACACACTGCTCTTATATGCCCCCAAATGCTACCTAAGTTA
ATATTTAAGAGTCAGAATCACAGTTTATTTTCCACGTGTATTTTTTCCTTACCATTAAGA
ATAATTAAAGTATGCAGTTATTTACATGATACAGTAAACATTCGACCCAGTTTTCCTCGA
TTAATTTTATCTACTGTAACATCTTAAAGTTAATTTAATAAGAATAGATTCAATATTTAC
ACGTTTATTTCTTTAGATCTAATATAGCTTAAAACAAAACAACAATTTACACTAACAGTT
AAAAATGCTCGATATACCGCCATTCCCTCAGAAACGCAAAATTAGATTTTATGAAGTGAC
TTTGCGGTTATTAACTTCAATTGGCATCGATCCCAGTCGACGATAACAAAAATATTTTCA
ATGATATAAACTATGACGTATTTACACTGTGTCAACATTAAATGACGGTAAGCTAGATGT
TATAAAGGTCGAGATCCCTAAATAGTTTCATTACCGAATACCGAACCGAATAATGACTAT
TTAGGATTTTCATTTTGAATTATTAAAATGTGTAGTTTTCACATTTAAAAGTTCAGTCAT
AACTCTAACAGGTCGATCGAATTCTAATCTTAAAACAACAGTACAAAAGTTTCACAACCT
TGTTATATTTACAACGATCTTAATTATGTTCCGAACGACCATAAGTAGTATAGCCAGGCG
TCAGCGTGCAAAACGTCCTTTGTAATTTATCATACTTTTAGTATTATCACATTTCATAAA
CAGGGTTCGATAGACCTTTAGTCTATGTGTGGTCCTTTTCAATACATAGTTTCAGTATTA
CTTTTCCGTTTCCGCGTTCACACAGTTGCGATGACAATTAACAAATGCGCAATGTCGGCG
ACACGATGCATCAAGTCGGGCGCTATGCGATTCAGGTTTTCGTTTGCGAAATCGCATGAA
GGAAATATGTGAACGGTAAACATTGCCTGATGATGGCCAGGTGGAGCGATATTAACAATT
CCAGCGGCTTGTTTACGTTGCAAGTACGTTATAAAACCAGCAGTAAGGTTGTTAGACTGC
TGCAAGACGTCCATATGATCTCGTCCGCATGGTAATGCGAGCAACATACAATGTTCGTTT
TCCATCTTCATCTTGCGGTGGACCTGGTCCAGCTGCGCGGGCTCGAGGCGCATGCGCTGA
GCGATACGGAGCAGCGGCGTGGCCTGCTCGTGGTGCCGAGACAGCGTGTCGCCCGCCACG
CCAGGGTTACCGCCCACGAAGTGCATCTGTACGGCCGCAGAGTCGTTCTTCAGAGCCAAC
AGACCTTGCCACATCACCGGGTATCTCCTAAGGAGCATCTGCAAGGAGTCAGCCTCCCGC
GGCACCTGGCTGGCGTGCGGCGGGCCCGGCGGGGCGGCGAGGTCTGTTGGCT
(3592 bp)

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