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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40476_c1_seq2
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		PREDICTED:_Niemann-Pick_C1_protein_[Bombyx_mori]
Ontology
GO:0005319 F lipid transporter activity
GO:0005576 C extracellular region
GO:0005635 C nuclear envelope
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005887 C integral component of plasma membrane
GO:0006486 P protein glycosylation
GO:0006629 P lipid metabolic process
GO:0007041 P lysosomal transport
GO:0007165 P signal transduction
GO:0008158 F hedgehog receptor activity
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008206 P bile acid metabolic process
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030301 P cholesterol transport
GO:0031902 C late endosome membrane
GO:0042632 P cholesterol homeostasis
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:17.39 TPM:13.74
ORF EntryO_BomoMG18419_complete:A_BomoMG_comp40476_c1_seq2
Sequence
(Nucleotide)
GAGGTCCTACCACCAGTAAAAACTGTAAAATGCTGTAGATTACATTATTAATACACGTCA
AAGTTGGTCACACACACACACACAGGGGTGCTACATTTCGTCGGTGAGGGCGCTGCTCGA
GGGGTGCGGCTCGGCGGCCGTGCTCAGACTGCCGTAGGTGGGGCCGCTCCGGGACACTCG
CCAGCGTCCCCGGCGACGGGTTATGCCGATATAGCTGAGCATAACCGGCAGGAATACGAG
TCCGTGGGCCGCACCGAACAGCACAATCCCGAGGTACATCCGGAAGTAGAACACCTGGAA
GATCTGGCTCTTGGCCGTGGCGAGCACGATGATGCCGCCGAACTTGGTGAGCGTGATGCC
GGACAGCACGGACGAGCCCATGCGCAGCAGCGCGTCCGCCGCGCGCTCCCCGCGCCCGCG
CCCCGCCGACACGCTGAACGAGTGCACCAGGTGCGAGCAGAACTCCACCGATATGCCCAC
CGCCATCACCAAATTTACAAGCGAGACTGCATTCAAACTGATGCCCCACCAGTACATGAG
GCCGCCGAGATTAACAACAATCATAGTGATGGTCACTACGACTACAAGAGCCGAGAAGAG
ATCGAAGCCCATGAGCACGAAGGTGACGAAGAATATGGAGAGCACGGAGATGCCCATGCT
CTTGAGGGTGTCGGACCACATGGTGAGGTACTGCTCGTAGAAGACGTAGAAGACCGAGTA
GGGGAAGACGTTGACGGTGGCGGAGTGTCCCAGGTCGCGGAGGTGCGCGTTGAGCGTCTC
CGTGAGCGAGCCCGCCAGCGCGCGCGCCGCCCGCAGGCTGCCGTAGTAGTCCGAGCTGCT
GCGCAGGACCGTGTGGTAGCTCTGGTAGTAGGTGGCGCCGATCCCGGTGGTGTTCTGGCT
GTGCGAGCGCAGGTTGACGGCGTGCGAGTAGGCCGCGTGGCCTCCCTTGACGCAGCGGCT
CGACGGGTTGTCCTGCAGGAAGTACGGCAGGTACGTGCTGAAGTCCTGCGGGCTGGGACG
CTCTTCCGGCTGCACCAACTTTATGTTGCAAGCGGCACAATCGTCGGGTTGAGTGTCGCT
GGGACAGAAGCTGTTGTTGGACTGGAAGTAGAAGCAGCACTCCGGTGAGACAGACCAGTC
GAAGAAGTCGTCGAGCCAAGAGTTGGCTGGAGCCGCGATGTACGTGTCGGCCGGGCTGCG
GGACGCAGCGTATATCTGCATGGCGAGACTGTCGGGTCTACAGAACCTCGAGCCGCACAG
CAAGTTCTGCACGTCGGGGGTGGAGTAGTTCAGCTTGGCGTCCGTCTCGGCGTCCGTGAG
CACAAAGTAGACCGGCGGACCGATGTTCAGGTAGCGGTTCAGATGCTGGAAGTACTTCAA
CTGGAAACTGTCGTGGGGCATAGACAGCTCTTGGTCTAGTCCGATGTCGATGTGAGGCGC
TACAGCAACAGACGAGCAGAGCCAAGCAAAGAATATAATCATGACTGAGGCTCTGACTTC
CCTCTTCATCAGGAAAGGTACATAGAAATGTTGAAACAGGTTGTACAATGCTCCTTCACC
TTGTTCTGCCAGGTCTGTTTTGGTGCCCCGCAGACAGCAGAATATATCGAACCTGTTGTC
GAGTTGTCGGCGCGTGTCCAGCGCCAGCAGCGCCACGAAGCAGGTGACCTGCAGCAGGAA
GTCCACGAGCAGCGCCACGGCGGCGTACAGCGCGAAGGCGCGCACGGCCGGCATGTCGCT
CAGCGCCCCCAGGAAGAAGCACACCGACTCCGACACCGACGTCACGAACATCGACGGGCC
CACCTTGCCGAGCATTCTACCGATGTGTTGCTCGACGGTCTCGTCGGGGCGGCGCGGCTC
GCGCTGGTGGGTCTGCACCAGGATGAAGATGTTGTCGACGCCGACGGCCAGCACCAGGAA
CGGGATGACCTCCACGATGATAAGCGTGGCCGCCACTCCATAGAACCCGAAGATGCCCAT
GGAGCACACCACAGACGCCAACACGATAACCACACCGCCGAGCCCGAGCGTGATCTTGCT
GTCGATGAGCAGCCGCGAGAAGGTGGTGAAGCGGCCGAGCGCGATGGCGATGTACGCGAA
CATGATGAAGTAGGACACGAGGATGGTGTACACGTCCGACTTGGACTCGCGGTCCAGCTC
GTCCTCGATGGAGCGCTCCGACGTGTACGCGATGTCCATGTAGCCCGGCATCGCCTTCTC
CGTGTAGTTCTTCATGAACGCAATGAACGTCTTCTCCCACTCCAGTGCTTGTTTCAGCTG
GGACTTGTCCTGCTTGTTGTTGACGAGAAAGGTGAGGATGAGTGCCTGCGCGCGGTGGTA
GGGCGCGTGGGCAGAGAGCTGGTCGCCGCGCGGCAGGAAGCCGCCCAGCGCCACGCCGGG
CAGGACGGGCCCGCCGTACGACGACAGGCAGTCCACCGAGATCGGGTTGCTGGAGCACTG
CAGGATCTTGTCCAGGTGTTCGTTGTCCTCGTAGGAGAACTCGGACTTGTCGTTCTGCCA
CCAGCCCCACACGCTCTGCAGCACGCAGTCCTTGCTGGTGACGGGGCCGCGGAAGGGCGA
CGACAGCGGCGCGTAGCAAATGTTCTGGATCCCGGACTCGTTGCCGAGCTCTAAGATCTT
GGACTGCAGGTCGAACACGTCCAGCATGAAGGTGGCGTTGAACACAGGCCCGAAAGTCAG
GTTCGCGTGTTCGATCTCGGGCAGACCTTTCGAGCTGATTATTAACATTTCTGTCCTGTA
GAAAGGTTCGAAGTAGGAATCGAACCGCTGCCTCTCGACCCTGGAGCGCGAGGTGGGCGA
GGCCCACAGCTCCACGGGGTCGGTGGTCACCTGCATGTACGTGATGCCGGAGCCGAGGAT
CACCACAACGCACAAACCAGAGAAGAGGACCAGCCAAGGCGAGGAGGCCATGACGCAGCC
CCACCACTGGAAGAAGTCTTCAATTTTGGATTCCGTCGCAGCACCGAGCTTCTCGAGGAA
CGTCGCGTCTGTCTCGTCGCCATCGGTGGCCTCCATGGTCCAGCGCGTGCCCGACGCGTT
TGTTCCCATCTCTTGATTGTTGTCTGAAGACACACCGTGCGTATGCAGTAGGGGCGGGTA
CGTACTGGCGCGGCGCTCGTGCAGCGGGCTCGTCTCGGGGCCGCACTCAACGAGGTTTTC
GGTTTGATTGCAACAGAAGACGCCCGTGAGGAACAGCGTCGAGAAGATACAGAATACGAT
GGTCATGACGATTGCGTAGCCGTCGAAGCCCGCGATGGAGAACGGCTGCGGGGGCGGGGG
GCGCGGCGGGGGCGCGGGGCACGACGCCTCGCAGTCCAGGCACGAGCAGCCCGGCATGCC
CTTCGTTCCGACATTGCAGGGCTCGGCTATCGGAGCGTAGGGCGTGTACCCATCGACGGG
CACGTCAGTGGCCTTATAGTTAATCTGGAAGGGCACTTGATAGTTGGAAGCGTCCCCCAT
GTTATCGAACCAACGTTGCGCCGAGCACGCGTCTCCCCACTGACCGCACATCACCTTTAT
GGATCGCTCGTTTGTTGACGTAAGCTTAACCTCAGAGCATGAGTTGTAGATGCCATCCAT
GAAAGTTTTACTCAGGTAGTAATCGATCTCAGATATCCTGCGATGTGTACCGTTGAACTG
TTCTGTTTGAACTGGCTTCAAGTATTTGCTCTGATCGACGGCGCAGGCCATTCCACAGAT
CGGCTTCAAAAAGTTCTGAAAGCACGTCGGGCATCTCCCCAGCAAATTTTCCGCAAGGGC
GATATTCACTTTGAGCTGGTTCAGTTGTTCGTAATTGCAGCACGAATAACCTCCTTTGGC
TATCTCGGGACAATATTGCTCAATTATTTTCATTGCCTTTTCTTCGATCGGTTTAGCGGG
TCCATCATAGAAACAATTCATCATTTTATGTTCTGTGCTGTTCGCACAAACGCCGTACCA
TATGCAGTGACCATCTTCGGCCAGAGCAGACGGGATATGTTCTACTAACACCAATAGAAA
AAACAAGGCAGATAGAAATCGTCGCAAAAAACTTCCGCGATCAGCCATCTTTTATCCTTA
TTTTTCACAATGAAATGATTAGATTCAATTTTATTAGCATATTATAATTAGAGCTTGTCC
AAAAAATACGTTTCTCTAACGTGAGTTACGTAGAGTAAAAAATAAAATAACAAAAATCAT
AAATAAATTATTTGTCCGACATAACGCACCACTATCGCGCACAATTAGCTTCCCGAAAGC
TCGAGATTTG
(4270 bp)

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