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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40476_c1_seq1
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		PREDICTED:_Niemann-Pick_C1_protein_[Bombyx_mori]
Ontology
GO:0005319 F lipid transporter activity
GO:0005576 C extracellular region
GO:0005635 C nuclear envelope
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005887 C integral component of plasma membrane
GO:0006486 P protein glycosylation
GO:0006629 P lipid metabolic process
GO:0007041 P lysosomal transport
GO:0007165 P signal transduction
GO:0008158 F hedgehog receptor activity
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008206 P bile acid metabolic process
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030301 P cholesterol transport
GO:0031902 C late endosome membrane
GO:0042632 P cholesterol homeostasis
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:1.95 TPM:1.54
ORF EntryO_BomoMG18415_complete:A_BomoMG_comp40476_c1_seq1
Sequence
(Nucleotide)
GCCAAGACCATTTTAGGTCGCACAAACGGTGGAGACGAGCTTTAGGCTCAGCTGTGTGTA
AGCGAGCACCGTATGTCGTGGTACAAATAGATCGATGCCTCTTTCGAGTTGCCTATGTTT
GTCAATGCTTTATGCGTATCGATATTGATATGACTTACCGATATAGCTGAGCATAACCGG
CAGGAATACGAGTCCGTGGGCCGCACCGAACAGCACAATCCCGAGGTACATCCGGAAGTA
GAACACCTGGAAGATCTGGCTCTTGGCCGTGGCGAGCACGATGATGCCGCCGAACTTGGT
GAGCGTGATGCCGGACAGCACGGACGAGCCCATGCGCAGCAGCGCGTCCGCCGCGCGCTC
CCCGCGCCCGCGCCCCGCCGACACGCTGAACGAGTGCACCAGGTGCGAGCAGAACTCCAC
CGATATGCCCACCGCCATCACCAAATTTACAAGCGAGACTGCATTCAAACTGATGCCCCA
CCAGTACATGAGGCCGCCGAGATTAACAACAATCATAGTGATGGTCACTACGACTACAAG
AGCCGAGAAGAGATCGAAGCCCATGAGCACGAAGGTGACGAAGAATATGGAGAGCACGGA
GATGCCCATGCTCTTGAGGGTGTCGGACCACATGGTGAGGTACTGCTCGTAGAAGACGTA
GAAGACCGAGTAGGGGAAGACGTTGACGGTGGCGGAGTGTCCCAGGTCGCGGAGGTGCGC
GTTGAGCGTCTCCGTGAGCGAGCCCGCCAGCGCGCGCGCCGCCCGCAGGCTGCCGTAGTA
GTCCGAGCTGCTGCGCAGGACCGTGTGGTAGCTCTGGTAGTAGGTGGCGCCGATCCCGGT
GGTGTTCTGGCTGTGCGAGCGCAGGTTGACGGCGTGCGAGTAGGCCGCGTGGCCTCCCTT
GACGCAGCGGCTCGACGGGTTGTCCTGCAGGAAGTACGGCAGGTACGTGCTGAAGTCCTG
CGGGCTGGGACGCTCTTCCGGCTGCACCAACTTTATGTTGCAAGCGGCACAATCGTCGGG
TTGAGTGTCGCTGGGACAGAAGCTGTTGTTGGACTGGAAGTAGAAGCAGCACTCCGGTGA
GACAGACCAGTCGAAGAAGTCGTCGAGCCAAGAGTTGGCTGGAGCCGCGATGTACGTGTC
GGCCGGGCTGCGGGACGCAGCGTATATCTGCATGGCGAGACTGTCGGGTCTACAGAACCT
CGAGCCGCACAGCAAGTTCTGCACGTCGGGGGTGGAGTAGTTCAGCTTGGCGTCCGTCTC
GGCGTCCGTGAGCACAAAGTAGACCGGCGGACCGATGTTCAGGTAGCGGTTCAGATGCTG
GAAGTACTTCAACTGGAAACTGTCGTGGGGCATAGACAGCTCTTGGTCTAGTCCGATGTC
GATGTGAGGCGCTACAGCAACAGACGAGCAGAGCCAAGCAAAGAATATAATCATGACTGA
GGCTCTGACTTCCCTCTTCATCAGGAAAGGTACATAGAAATGTTGAAACAGGTTGTACAA
TGCTCCTTCACCTTGTTCTGCCAGGTCTGTTTTGGTGCCCCGCAGACAGCAGAATATATC
GAACCTGTTGTCGAGTTGTCGGCGCGTGTCCAGCGCCAGCAGCGCCACGAAGCAGGTGAC
CTGCAGCAGGAAGTCCACGAGCAGCGCCACGGCGGCGTACAGCGCGAAGGCGCGCACGGC
CGGCATGTCGCTCAGCGCCCCCAGGAAGAAGCACACCGACTCCGACACCGACGTCACGAA
CATCGACGGGCCCACCTTGCCGAGCATTCTACCGATGTGTTGCTCGACGGTCTCGTCGGG
GCGGCGCGGCTCGCGCTGGTGGGTCTGCACCAGGATGAAGATGTTGTCGACGCCGACGGC
CAGCACCAGGAACGGGATGACCTCCACGATGATAAGCGTGGCCGCCACTCCATAGAACCC
GAAGATGCCCATGGAGCACACCACAGACGCCAACACGATAACCACACCGCCGAGCCCGAG
CGTGATCTTGCTGTCGATGAGCAGCCGCGAGAAGGTGGTGAAGCGGCCGAGCGCGATGGC
GATGTACGCGAACATGATGAAGTAGGACACGAGGATGGTGTACACGTCCGACTTGGACTC
GCGGTCCAGCTCGTCCTCGATGGAGCGCTCCGACGTGTACGCGATGTCCATGTAGCCCGG
CATCGCCTTCTCCGTGTAGTTCTTCATGAACGCAATGAACGTCTTCTCCCACTCCAGTGC
TTGTTTCAGCTGGGACTTGTCCTGCTTGTTGTTGACGAGAAAGGTGAGGATGAGTGCCTG
CGCGCGGTGGTAGGGCGCGTGGGCAGAGAGCTGGTCGCCGCGCGGCAGGAAGCCGCCCAG
CGCCACGCCGGGCAGGACGGGCCCGCCGTACGACGACAGGCAGTCCACCGAGATCGGGTT
GCTGGAGCACTGCAGGATCTTGTCCAGGTGTTCGTTGTCCTCGTAGGAGAACTCGGACTT
GTCGTTCTGCCACCAGCCCCACACGCTCTGCAGCACGCAGTCCTTGCTGGTGACGGGGCC
GCGGAAGGGCGACGACAGCGGCGCGTAGCAAATGTTCTGGATCCCGGACTCGTTGCCGAG
CTCTAAGATCTTGGACTGCAGGTCGAACACGTCCAGCATGAAGGTGGCGTTGAACACAGG
CCCGAAAGTCAGGTTCGCGTGTTCGATCTCGGGCAGACCTTTCGAGCTGATTATTAACAT
TTCTGTCCTGTAGAAAGGTTCGAAGTAGGAATCGAACCGCTGCCTCTCGACCCTGGAGCG
CGAGGTGGGCGAGGCCCACAGCTCCACGGGGTCGGTGGTCACCTGCATGTACGTGATGCC
GGAGCCGAGGATCACCACAACGCACAAACCAGAGAAGAGGACCAGCCAAGGCGAGGAGGC
CATGACGCAGCCCCACCACTGGAAGAAGTCTTCAATTTTGGATTCCGTCGCAGCACCGAG
CTTCTCGAGGAACGTCGCGTCTGTCTCGTCGCCATCGGTGGCCTCCATGGTCCAGCGCGT
GCCCGACGCGTTTGTTCCCATCTCTTGATTGTTGTCTGAAGACACACCGTGCGTATGCAG
TAGGGGCGGGTACGTACTGGCGCGGCGCTCGTGCAGCGGGCTCGTCTCGGGGCCGCACTC
AACGAGGTTTTCGGTTTGATTGCAACAGAAGACGCCCGTGAGGAACAGCGTCGAGAAGAT
ACAGAATACGATGGTCATGACGATTGCGTAGCCGTCGAAGCCCGCGATGGAGAACGGCTG
CGGGGGCGGGGGGCGCGGCGGGGGCGCGGGGCACGACGCCTCGCAGTCCAGGCACGAGCA
GCCCGGCATGCCCTTCGTTCCGACATTGCAGGGCTCGGCTATCGGAGCGTAGGGCGTGTA
CCCATCGACGGGCACGTCAGTGGCCTTATAGTTAATCTGGAAGGGCACTTGATAGTTGGA
AGCGTCCCCCATGTTATCGAACCAACGTTGCGCCGAGCACGCGTCTCCCCACTGACCGCA
CATCACCTTTATGGATCGCTCGTTTGTTGACGTAAGCTTAACCTCAGAGCATGAGTTGTA
GATGCCATCCATGAAAGTTTTACTCAGGTAGTAATCGATCTCAGATATCCTGCGATGTGT
ACCGTTGAACTGTTCTGTTTGAACTGGCTTCAAGTATTTGCTCTGATCGACGGCGCAGGC
CATTCCACAGATCGGCTTCAAAAAGTTCTGAAAGCACGTCGGGCATCTCCCCAGCAAATT
TTCCGCAAGGGCGATATTCACTTTGAGCTGGTTCAGTTGTTCGTAATTGCAGCACGAATA
ACCTCCTTTGGCTATCTCGGGACAATATTGCTCAATTATTTTCATTGCCTTTTCTTCGAT
CGGTTTAGCGGGTCCATCATAGAAACAATTCATCATTTTATGTTCTGTGCTGTTCGCACA
AACGCCGTACCATATGCAGTGACCATCTTCGGCCAGAGCAGACGGGATATGTTCTACTAA
CACCAATAGAAAAAACAAGGCAGATAGAAATCGTCGCAAAAAACTTCCGCGATCAGCCAT
CTTTTATCCTTATTTTTCACAATGAAATGATTAGATTCAATTTTATTAGCATATTATAAT
TAGAGCTTGTCCAAAAAATACGTTTCTCTAACGTGAGTTACGTAGAGTAAAAAATAAAAT
AACAAAAATCATAAATAAATTATTTGTCCGACATAACGCACCACTATCGCGCACAATTAG
CTTCCCGAAAGCTCGAGATTTG
(4222 bp)

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