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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40460_c1_seq7
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		PREDICTED:_PDZ_and_LIM_domain_protein_Zasp_[Bombyx_mori]
Ontology
GO:0001725 C stress fiber
GO:0001952 P regulation of cell-matrix adhesion
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005915 C zonula adherens
GO:0005925 C focal adhesion
GO:0005927 C muscle tendon junction
GO:0008270 F zinc ion binding
GO:0015629 C actin cytoskeleton
GO:0016323 C basolateral plasma membrane
GO:0030018 C Z disc
GO:0030239 P myofibril assembly
GO:0031252 C cell leading edge
GO:0045177 C apical part of cell
GO:0045178 C basal part of cell
GO:0046872 F metal ion binding
GO:0051371 F muscle alpha-actinin binding
GO:0061061 P muscle structure development
Transcript
Level		FPKM:12.54 TPM:9.91
ORF EntryO_BomoMG18343_complete:A_BomoMG_comp40460_c1_seq7
Sequence
(Nucleotide)
CGCGCCACAACTCGCTGCTTCCCCACGATCGAACGACCGACGCCCGCGCCCGGTGTCGTA
TTACAGCTCTAAATTTATCTCGTGAGCGCGATCGCCAATTTGGAAACGGTCGCGCGCCGT
GTTTTGAACTGGTGATTGACAGTGCCGAGTGAGGAGTGATCCCCCGAGCGACGTATTATC
GCCTGCCGACATGGCACAGTTAATAACTGTGCGGCTTAACAAATCAGATCATCAACCCTT
GGGCTTCAGGCTGCAAGGAGGCAAGGACTTCGGCACCCCACTAGTCGTTCAAAAGGTGAA
TGGCGGCAGTGCGGCAGAGCGGGCTGGCTTGCAGGCCGGCGACGCTCTGATTCGCGTCAA
CAACACAGACGTGTTCACCCTGCGTCACCAAGACGCGCAGGACACCATCCGCGCTGCTGG
TGCTAATTTAGAACTAACCGTTCAACGCGGGGGAGGTACATGGCGTCCATCAGTGACCCC
GACCGGCAGCTTGCCGAGACCCGGCTCTCGTCCTCTGGGAGGTACTCCGACTCCGGTGAC
GAACACATCCTTGAAGGCGAACCCACAACCGTCGCGCAATTTCGGCTCCGGGCACAACAA
TGTCGCTAAGCCTTTCGGTTATATGAACGGTAACGACACCGTCAAGAGTGTCGTGAACAA
ACAATACAACACTCCTGTCAATATATACAGCGACAAGACAATTGCGGAGACCCTGTCGGC
CCAAACCGAAGTACTGGCTGGTGGAGTACTCGGAGTTAATTTCAAGAAGAATGAGAAGAC
GTACGATGCTGAAAAAAGCGCTGTTTTCAAAGTACTTCAGGAGGAGCAAAACGACCCTGA
ACCAGAAGTGTCGACTCCGACCACCGGCTCAGTGCCCCCGGTGAGCGGACTCCGGCACGT
GCAGGCGCCCGTCACGCGACCCGACGCGCCCGTCAACAACACGGGCGGCCTGCCTCCCGG
ACAGAACATTTGCGAGGAGTGCGAACGATTAATTACGGGAGTGTTTGTGCGCATCAAGGA
CAAGAATCTTCACGTGGAATGCTTCAAGTGTTCGACTTGCGGGAGCTCTTTGAAGAATCA
GGGCTATTACAACATAAACGGTAAACTGTACTGCGACATCCACGCCAAGCTGGTCGCACG
TCAGAATCCACCAGCGCCGAACTTGGACCCTGTAACCGTGCCACCCGGTGGCCGAGTTCC
TACCAACACATACTCTACGCCTTTGCCGCCACTGTCTACCAATAACTACAGCAATGGATC
GTCTTCGCTGTTCAGCCCTTCAAGCAACCTGTCTGGCCCGAAGCCGTTCGGGTCGTCGGT
GGGGTCCGCGTACTCTCCGTCGCTGTCCCCCCGCTCGGCGCCGCTGTCCCCCGCGCGGCC
CCTCACCGCGCCCGCCCCGCCCCCCGCCGCACCCTTCGCCCCCAAACGGCCAGTTTCCGT
TTTTAAAGGTTCCAGTGTAGGAGCTGCCACACGTGGTAAAACTTTTGGGGTATCATCGGC
ACCAAAACGAGGAAGGGGAATATTGAATAAGCCTGCCCTGCCCGGCTCTCGTGTGCCACT
TTGCGCATCTTGTAATGGAAACATTAGAGGTCCATTCATCACGGCTCTTGGACGCATATG
GTGCCCCGAGCACTTCATCTGCGTGAATGCAACATGCAGACGTCCTCTGCAGGATATCGG
ATTCGTCGAAGAGAACGGACAGCTCTACTGTGAATTCTGTTTTGAGCAATACATAGCACC
CGCCTGTGACAAATGTCATGCTAAAATTAAAGGCGACTGTTTAAACGCCATCGGTAAACA
CTTCCATCCAGAGTGCTTCAACTGCGTCTATTGCGGAAAGTTGTTCGGAAACAACCCGTT
CTTCTTAGAAGACGGACTGCCATACTGCGAAGCAGATTGGAATGAGCTCTTTACAACAAA
ATGTTTCGCTTGCGGATTCCCCGTGGAGGCGGGCGACAGGTGGGTCGAGGCGCTCAACAA
TAACTACCACAGTCAGTGCTTCAACTGCACGGTGTGTAAAAAGAACCTTGAAGGACAGAG
CTTCTTCGCCAAGGGAGGTCGGCCTTTCTGTAAAACACACGCCCGTTAAAAGTCCAATAA
AAATAATCTACAACTCGGACACTGTTTACTCGACTACTACTTTTCGTCCGGTTTCGCCGT
TGCCAATCACGCCGCCGGCGGTCGGTACGCCGTCGCCACAGAGAACTAGGAAGTTGGAAA
CACCCCTCCACTTCGATGGAGGACTGTTTTCCGACATAAGAAGTACAGATGGAAAGTTAC
TTAGCAAAGTAACGGTCGATAGGGTGCAGCGTTCCACACACCATGACGTCATCGACTCCC
CGAGTACTGTTGAGGTGCACGACAAAAATTACGTCGACGATATAATAAAATCCGAAACTA
TAATAAATCAAGACATAATAACGGTCAAATTCACTCCGGTCCCACCGGAATTCGATTCCC
AAATGATAAGTCCGCAACTGGCCAAACGGTCCAAAACACCAATTCAATATCTCAAGGATG
ACTTTGTTGATTTGCAAAGTTACAAAATTGTGAATTCTTTATGTAAAGAAAAACTATTAG
AAGCTAATGCTTTACGGACACAATCTGCACAAGATTTGATCACATTAGAACCAACTGAAG
TCGAAAGTAGTACTCTAGCCAAGTTTGTAAGATCTGTGAGTCAACAAAAGCAAATTAGCT
GCAGTGACAGTGATCCAATGGGCCAAGAAATTAATTCGATACCAATTAAAATGGAGTCGG
ATTCTTTAACAAGTTTAGTTGAGAAATCGATCAAAACTGCAACTGTGAGTGAAAATCGAG
AGCTCGATCACTTTTTGAATACGGACTTGTCAAAAATCGAGAGGAGCCTTAGTCCTTTGC
CAAATTTCTTGATCACCGAACATTTGACAAAAATTAACAGTTACTTGCAGGAGAGCCTTG
ACGTCTGCAGTGGTAACGATAGCAATAATCGGTGCACTCCGTCCATTATACACGATAATG
TGGAAACGAAACATGAATACTTTAGTGAGGCATTTGATTGCGTAAATGTGCAGCAGAATA
TTCCTGCAAATAGTGTTTTGGACAGTTCTCAAACGGAAGAGAATTCTGTTGATTCTCAGA
ACAATCGATCACTTACCGCACGCGAGAATTCTGAATATACAGACCCTAAGAAAAGTAAGT
CCACATTAAACAGTGTCCGCCGGGGACGCCCTTCGATTTTGAACGCTATATCAAACATGC
CGATACATTATCTCGCAACGATTTTGTGTATTTTCTTAATTGTATATAACCTTATATACC
AATATATTAAATTAAATTGTCCAGGTAATAAAATATAATATAGATTTTAAGATTGTTCAA
CGGAATTGTATGCGTTAAACTAGTCATTGCAAAACTATTCATACGTGTTATATCTATTAG
CAAATGTATTAATTTTAGATCAGGATGTAAATAGTCACATAACACAGCTCCCGCGTTATA
ATTTAACTAAATTTATCTAAAATTAACATTATGGCGCTTTTCTCACAATTGTGACGATTG
ACAATCCCTTCATATAAGCTTTGTAAACAGCTTCGGAATGTTTAAAAAAAATATACTAAC
TTTAACATCTGTAAGTTTATTACATTTTTTTATAATTCATAATTTATTTATTGGTGCACC
AATCTCATTTTGAAATTCATATTATCTTCAATGGAATTGTTCTATCGAAATTTATGGCTA
AGATGCCTACTTGTAACGAATTTTAAGAATTAAATTAAATTTATCAAACAACTGTTGTCC
GACAGTTACTGTCCTAGAGTACCTAATCCTAAGTACATTATATACTTTTTATATGAATTT
AGATATACAAACTTTACAGCATTATCTATCACATTTTATGATTATGTGAGCTTAATAAAG
TATTTAATTTTATAAAAAAA
(3920 bp)

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