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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40460_c1_seq6
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		PREDICTED:_PDZ_and_LIM_domain_protein_Zasp-like_[Papilio_xuthus]
Ontology
GO:0001725 C stress fiber
GO:0001952 P regulation of cell-matrix adhesion
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005915 C zonula adherens
GO:0005925 C focal adhesion
GO:0005927 C muscle tendon junction
GO:0008270 F zinc ion binding
GO:0015629 C actin cytoskeleton
GO:0016323 C basolateral plasma membrane
GO:0030018 C Z disc
GO:0030239 P myofibril assembly
GO:0031252 C cell leading edge
GO:0045177 C apical part of cell
GO:0045178 C basal part of cell
GO:0046872 F metal ion binding
GO:0051371 F muscle alpha-actinin binding
GO:0061061 P muscle structure development
Transcript
Level		FPKM:0.49 TPM:0.39
ORF EntryO_BomoMG18341_complete:A_BomoMG_comp40460_c1_seq6
Sequence
(Nucleotide)
CTGGTGCTAACCAAGGTCCAGTGTGTGATCCTACCCCGTCAACAGGTTCCAGTGTAGGAG
CTGCCACACGTGGTAAAACTTTTGGGGTATCATCGGCACCAAAACGAGGAAGGGGAATAT
TGAATAAGCCTGCCCTGCCCGGCTCTCGTGTGCCACTTTGCGCATCTTGTAATGGAAACA
TTAGGTGATTCAGTGTGGAAAATTGACGCAATTGATTGTTGTGTGATGCATGAATATTAT
CGAGACAAGATAACTTTAGCGAGTATATAATGTCATGCATAAAATATTTCTCTAACCATA
ACCATAGCAACTTTTCCTACGTTATTTGCGTTAGTCTTACTTATTAAATATCGCACGTAT
TAAAACTAAAATGCTTATGTGTTTTTGATTGTTTTCCTAACAGCTAACGATGTGCAGACC
ACAAGCAGTTCTCAGAAACCAGAGTTTAAAAGTCAAGCTGAAGAACGTCTCATACGAAAA
ATGGCTAAAATGGCATTAAATGGATATGAAATTGGCATTCAACGTAAAATAAAGCCAGCC
GACCACATCCAATCTATGGCTGATAAAATACAAGACACTGTCGTTACTAAGCATCCTCTG
AATACAGATGGTTCGTCGGAGGAAAACATTCGTGAGAATAGTACTCTAAGAAAAATCTCC
ACTAACGACAACGTGTACAAAAATACAGAATTCGGTAGTATGAATGACAGAGTTAAAGAG
AGCAATTTCTTAAATTCAATCATTTTCAATGGAAGTACTCCAGTACCTCCGCCATTACCT
ACATCTCCTATACCCACTTTCAATATTCATAGTACACCTCTTGGAGAACCAATAGTTACG
GGTAATATGAAAAAACAATCTGATTTACCTAAAAATTTCAATATCGATTACGGCCTAGAT
TTCCAGAATGAAACTTTGAACGGATCCTTAAATGACAATGATTTTAAAATAATTGATGAC
CATAAAAACACAACTAACACTCTCAAAAAGACGAATGGTTTTCAAAATTCTTTCCTGAAT
GGAATGAATTCAACCAAATCCGAAAAGAAACCAGATCAAAAGTTTGAAAATAACATTTAC
TCTAATACATTGAATAAACGAAAATTATTTGAAAACAAAGATGATACTAACAATTTCAAA
CACTCGCCATGTGACTTAAAGAATGAAAAGAAAATCATTGACGTATATTCAAAAGCAAAT
AATTCCAATCAATCTTTCAAGTTAGACGGTCACGACTTATCTAACACAACGGAAGAGACA
AAGCCGGCAGTTCTGCCGAGTTCCGTTAAAGACAATTCATTAGTATATGACGCACATGAT
TCAACAACTGTCACCGATGACCCTCCATCTAAAGTTTATGATACCGATAATGACACATTC
ACCGAATCAAATACTTTAGAAAAAATAGTTAATAATACTGAGGAGGTTGTTAGACGACGA
CAGAAAAAGAACATTAGGAATGATGACGGTAGAAGGGATTCTCATATCATCGCCAGACCG
CTTAGTACTATGACTTCTGTAGATGTTGAAGAGGGAATGTATCCTGTATGTCACATATGC
GACAAGGCTATTACAAGAGGTCCATTCATCACGGCTCTTGGACGCATATGGTGCCCCGAG
CACTTCATCTGCGTGAATGCAACATGCAGACGTCCTCTGCAGGATATCGGATTCGTCGAA
GAGAACGGACAGCTCTACTGTGAATTCTGTTTTGAGCAATACATAGCACCCGCCTGTGAC
AAATGTCATGCTAAAATTAAAGGCGACTGTTTAAACGCCATCGGTAAACACTTCCATCCA
GAGTGCTTCAACTGCGTCTATTGCGGAAAGTTGTTCGGAAACAACCCGTTCTTCTTAGAA
GACGGACTGCCATACTGCGAAGCAGATTGGAATGAGCTCTTTACAACAAAATGTTTCGCT
TGCGGATTCCCCGTGGAGGCGGGCGACAGGTGGGTCGAGGCGCTCAACAATAACTACCAC
AGTCAGTGCTTCAACTGCACGGTGTGTAAAAAGAACCTTGAAGGACAGAGCTTCTTCGCC
AAGGGAGGTCGGCCTTTCTGTAAAACACACGCCCGTTAAAAGTCCAATAAAAATAATCTA
CAACTCGGACACTGTTTACTCGACTACTACTTTTCGTCCGGTTTCGCCGTTGCCAATCAC
GCCGCCGGCGGTCGGTACGCCGTCGCCACAGAGAACTAGGAAGTTGGAAACACCCCTCCA
CTTCGATGGAGGACTGTTTTCCGACATAAGAAGTACAGATGGAAAGTTACTTAGCAAAGT
AACGGTCGATAGGGTGCAGCGTTCCACACACCATGACGTCATCGACTCCCCGAGTACTGT
TGAGGTGCACGACAAAAATTACGTCGACGATATAATAAAATCCGAAACTATAATAAATCA
AGACATAATAACGGTCAAATTCACTCCGGTCCCACCGGAATTCGATTCCCAAATGATAAG
TCCGCAACTGGCCAAACGGTCCAAAACACCAATTCAATATCTCAAGGATGACTTTGTTGA
TTTGCAAAGTTACAAAATTGTGAATTCTTTATGTAAAGAAAAACTATTAGAAGCTAATGC
TTTACGGACACAATCTGCACAAGATTTGATCACATTAGAACCAACTGAAGTCGAAAGTAG
TACTCTAGCCAAGTTTGTAAGATCTGTGAGTCAACAAAAGCAAATTAGCTGCAGTGACAG
TGATCCAATGGGCCAAGAAATTAATTCGATACCAATTAAAATGGAGTCGGATTCTTTAAC
AAGTTTAGTTGAGAAATCGATCAAAACTGCAACTGTGAGTGAAAATCGAGAGCTCGATCA
CTTTTTGAATACGGACTTGTCAAAAATCGAGAGGAGCCTTAGTCCTTTGCCAAATTTCTT
GATCACCGAACATTTGACAAAAATTAACAGTTACTTGCAGGAGAGCCTTGACGTCTGCAG
TGGTAACGATAGCAATAATCGGTGCACTCCGTCCATTATACACGATAATGTGGAAACGAA
ACATGAATACTTTAGTGAGGCATTTGATTGCGTAAATGTGCAGCAGAATATTCCTGCAAA
TAGTGTTTTGGACAGTTCTCAAACGGAAGAGAATTCTGTTGATTCTCAGAACAATCGATC
ACTTACCGCACGCGAGAATTCTGAATATACAGACCCTAAGAAAAGTAAGTCCACATTAAA
CAGTGTCCGCCGGGGACGCCCTTCGATTTTGAACGCTATATCAAACATGCCGATACATTA
TCTCGCAACGATTTTGTGTATTTTCTTAATTGTATATAACCTTATATACCAATATATTAA
ATTAAATTGTCCAGGTAATAAAATATAATATAGATTTTAAGATTGTTCAACGGAATTGTA
TGCGTTAAACTAGTCATTGCAAAACTATTCATACGTGTTATATCTATTAGCAAATGTATT
AATTTTAGATCAGGATGTAAATAGTCACATAACACAGCTCCCGCGTTATAATTTAACTAA
ATTTATCTAAAATTAACATTATGGCGCTTTTCTCACAATTGTGACGATTGACAATCCCTT
CATATAAGCTTTGTAAACAGCTTCGGAATGTTTAAAAAAAATATACTAACTTTAACATCT
GTAAGTTTATTACATTTTTTTATAATTCATAATTTATTTATTGGTGCACCAATCTCATTT
TGAAATTCATATTATCTTCAATGGAATTGTTCTATCGAAATTTATGGCTAAGATGCCTAC
TTGTAACGAATTTTAAGAATTAAATTAAATTTATCAAACAACTGTTGTCCGACAGTTACT
GTCCTAGAGTACCTAATCCTAAGTACATTATATACTTTTTATATGAATTTAGATATACAA
ACTTTACAGCATTATCTATCACATTTTATGATTATGTGAGCTTAATAAAGTATTTAATTT
TATAAAAAAA
(3910 bp)

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