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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40460_c1_seq5
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		PREDICTED:_PDZ_and_LIM_domain_protein_Zasp-like_[Papilio_xuthus]
Ontology
GO:0001725 C stress fiber
GO:0001952 P regulation of cell-matrix adhesion
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005915 C zonula adherens
GO:0005925 C focal adhesion
GO:0005927 C muscle tendon junction
GO:0008270 F zinc ion binding
GO:0015629 C actin cytoskeleton
GO:0016323 C basolateral plasma membrane
GO:0030018 C Z disc
GO:0030239 P myofibril assembly
GO:0031252 C cell leading edge
GO:0045177 C apical part of cell
GO:0045178 C basal part of cell
GO:0046872 F metal ion binding
GO:0051371 F muscle alpha-actinin binding
GO:0061061 P muscle structure development
Transcript
Level		FPKM:0.23 TPM:0.18
ORF EntryO_BomoMG18335_complete:A_BomoMG_comp40460_c1_seq5
Sequence
(Nucleotide)
TCATTCACAAAAATTATTCGTATACATGGTCGCCATTTACTCGCACTAGTTTTGTATGAA
TTCAACAGTTATCTTTGAAGTGGGACTTATTGAATGGTTTTACGCAGGGGAGTGTTTGTG
CGCATCAAGGACAAGAATCTTCACGTGGAATGCTTCAAGTGTTCGACTTGCGGGAGCTCT
TTGAAGAATCAGGGCTATTACAACATAAACGGTAAACTGTACTGCGACATCCACGCCAAG
CTGGTCGCACGTCAGAATCCACCAGCGCCGAACTTGGACCCTGTAACCGTGCCACCCGGT
GGCCGAGTTCCTACCAACACATACTCTACGCCTTTGCCGCCACTGTCTACCAATAACTAC
AGCAATGGATCGTCTTCGCTGTTCAGCCCTTCAAGCAACCTGTCTGGCCCGAAGCCGTTC
GGGTCGTCGGTGGGGTCCGCGTACTCTCCGTCGCTGTCCCCCCGCTCGGCGCCGCTGTCC
CCCGCGCGGCCCCTCACCGCGCCCGCCCCGCCCCCCGCCGCACCCTTCGCCCCCAAACGG
CCAGTTTCCGTTTTTAAAGGTTCCAGTGTAGGAGCTGCCACACGTGGTAAAACTTTTGGG
GTATCATCGGCACCAAAACGAGGAAGGGGAATATTGAATAAGCCTGCCCTGCCCGGCTCT
CGTGTGCCACTTTGCGCATCTTGTAATGGAAACATTAGGTGATTCAGTGTGGAAAATTGA
CGCAATTGATTGTTGTGTGATGCATGAATATTATCGAGACAAGATAACTTTAGCGAGTAT
ATAATGTCATGCATAAAATATTTCTCTAACCATAACCATAGCAACTTTTCCTACGTTATT
TGCGTTAGTCTTACTTATTAAATATCGCACGTATTAAAACTAAAATGCTTATGTGTTTTT
GATTGTTTTCCTAACAGCTAACGATGTGCAGACCACAAGCAGTTCTCAGAAACCAGAGTT
TAAAAGTCAAGCTGAAGAACGTCTCATACGAAAAATGGCTAAAATGGCATTAAATGGATA
TGAAATTGGCATTCAACGTAAAATAAAGCCAGCCGACCACATCCAATCTATGGCTGATAA
AATACAAGACACTGTCGTTACTAAGCATCCTCTGAATACAGATGGTTCGTCGGAGGAAAA
CATTCGTGAGAATAGTACTCTAAGAAAAATCTCCACTAACGACAACGTGTACAAAAATAC
AGAATTCGGTAGTATGAATGACAGAGTTAAAGAGAGCAATTTCTTAAATTCAATCATTTT
CAATGGAAGTACTCCAGTACCTCCGCCATTACCTACATCTCCTATACCCACTTTCAATAT
TCATAGTACACCTCTTGGAGAACCAATAGTTACGGGTAATATGAAAAAACAATCTGATTT
ACCTAAAAATTTCAATATCGATTACGGCCTAGATTTCCAGAATGAAACTTTGAACGGATC
CTTAAATGACAATGATTTTAAAATAATTGATGACCATAAAAACACAACTAACACTCTCAA
AAAGACGAATGGTTTTCAAAATTCTTTCCTGAATGGAATGAATTCAACCAAATCCGAAAA
GAAACCAGATCAAAAGTTTGAAAATAACATTTACTCTAATACATTGAATAAACGAAAATT
ATTTGAAAACAAAGATGATACTAACAATTTCAAACACTCGCCATGTGACTTAAAGAATGA
AAAGAAAATCATTGACGTATATTCAAAAGCAAATAATTCCAATCAATCTTTCAAGTTAGA
CGGTCACGACTTATCTAACACAACGGAAGAGACAAAGCCGGCAGTTCTGCCGAGTTCCGT
TAAAGACAATTCATTAGTATATGACGCACATGATTCAACAACTGTCACCGATGACCCTCC
ATCTAAAGTTTATGATACCGATAATGACACATTCACCGAATCAAATACTTTAGAAAAAAT
AGTTAATAATACTGAGGAGGTTGTTAGACGACGACAGAAAAAGAACATTAGGAATGATGA
CGGTAGAAGGGATTCTCATATCATCGCCAGACCGCTTAGTACTATGACTTCTGTAGATGT
TGAAGAGGGAATGTATCCTGTATGTCACATATGCGACAAGGCTATTACAAGAGGTCCATT
CATCACGGCTCTTGGACGCATATGGTGCCCCGAGCACTTCATCTGCGTGAATGCAACATG
CAGACGTCCTCTGCAGGATATCGGATTCGTCGAAGAGAACGGACAGCTCTACTGTGAATT
CTGTTTTGAGCAATACATAGCACCCGCCTGTGACAAATGTCATGCTAAAATTAAAGGCGA
CTGTTTAAACGCCATCGGTAAACACTTCCATCCAGAGTGCTTCAACTGCGTCTATTGCGG
AAAGTTGTTCGGAAACAACCCGTTCTTCTTAGAAGACGGACTGCCATACTGCGAAGCAGA
TTGGAATGAGCTCTTTACAACAAAATGTTTCGCTTGCGGATTCCCCGTGGAGGCGGGCGA
CAGGTGGGTCGAGGCGCTCAACAATAACTACCACAGTCAGTGCTTCAACTGCACGGTGTG
TAAAAAGAACCTTGAAGGACAGAGCTTCTTCGCCAAGGGAGGTCGGCCTTTCTGTAAAAC
ACACGCCCGTTAAAAGTCCAATAAAAATAATCTACAACTCGGACACTGTTTACTCGACTA
CTACTTTTCGTCCGGTTTCGCCGTTGCCAATCACGCCGCCGGCGGTCGGTACGCCGTCGC
CACAGAGAACTAGGAAGTTGGAAACACCCCTCCACTTCGATGGAGGACTGTTTTCCGACA
TAAGAAGTACAGATGGAAAGTTACTTAGCAAAGTAACGGTCGATAGGGTGCAGCGTTCCA
CACACCATGACGTCATCGACTCCCCGAGTACTGTTGAGGTGCACGACAAAAATTACGTCG
ACGATATAATAAAATCCGAAACTATAATAAATCAAGACATAATAACGGTCAAATTCACTC
CGGTCCCACCGGAATTCGATTCCCAAATGATAAGTCCGCAACTGGCCAAACGGTCCAAAA
CACCAATTCAATATCTCAAGGATGACTTTGTTGATTTGCAAAGTTACAAAATTGTGAATT
CTTTATGTAAAGAAAAACTATTAGAAGCTAATGCTTTACGGACACAATCTGCACAAGATT
TGATCACATTAGAACCAACTGAAGTCGAAAGTAGTACTCTAGCCAAGTTTGTAAGATCTG
TGAGTCAACAAAAGCAAATTAGCTGCAGTGACAGTGATCCAATGGGCCAAGAAATTAATT
CGATACCAATTAAAATGGAGTCGGATTCTTTAACAAGTTTAGTTGAGAAATCGATCAAAA
CTGCAACTGTGAGTGAAAATCGAGAGCTCGATCACTTTTTGAATACGGACTTGTCAAAAA
TCGAGAGGAGCCTTAGTCCTTTGCCAAATTTCTTGATCACCGAACATTTGACAAAAATTA
ACAGTTACTTGCAGGAGAGCCTTGACGTCTGCAGTGGTAACGATAGCAATAATCGGTGCA
CTCCGTCCATTATACACGATAATGTGGAAACGAAACATGAATACTTTAGTGAGGCATTTG
ATTGCGTAAATGTGCAGCAGAATATTCCTGCAAATAGTGTTTTGGACAGTTCTCAAACGG
AAGAGAATTCTGTTGATTCTCAGAACAATCGATCACTTACCGCACGCGAGAATTCTGAAT
ATACAGACCCTAAGAAAAGTAAGTCCACATTAAACAGTGTCCGCCGGGGACGCCCTTCGA
TTTTGAACGCTATATCAAACATGCCGATACATTATCTCGCAACGATTTTGTGTATTTTCT
TAATTGTATATAACCTTATATACCAATATATTAAATTAAATTGTCCAGGTAATAAAATAT
AATATAGATTTTAAGATTGTTCAACGGAATTGTATGCGTTAAACTAGTCATTGCAAAACT
ATTCATACGTGTTATATCTATTAGCAAATGTATTAATTTTAGATCAGGATGTAAATAGTC
ACATAACACAGCTCCCGCGTTATAATTTAACTAAATTTATCTAAAATTAACATTATGGCG
CTTTTCTCACAATTGTGACGATTGACAATCCCTTCATATAAGCTTTGTAAACAGCTTCGG
AATGTTTAAAAAAAATATACTAACTTTAACATCTGTAAGTTTATTACATTTTTTTATAAT
TCATAATTTATTTATTGGTGCACCAATCTCATTTTGAAATTCATATTATCTTCAATGGAA
TTGTTCTATCGAAATTTATGGCTAAGATGCCTACTTGTAACGAATTTTAAGAATTAAATT
AAATTTATCAAACAACTGTTGTCCGACAGTTACTGTCCTAGAGTACCTAATCCTAAGTAC
ATTATATACTTTTTATATGAATTTAGATATACAAACTTTACAGCATTATCTATCACATTT
TATGATTATGTGAGCTTAATAAAGTATTTAATTTTATAAAAAAA
(4424 bp)

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