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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40460_c1_seq4
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		PREDICTED:_PDZ_and_LIM_domain_protein_Zasp_[Bombyx_mori]
Ontology
GO:0001725 C stress fiber
GO:0001952 P regulation of cell-matrix adhesion
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005915 C zonula adherens
GO:0005925 C focal adhesion
GO:0005927 C muscle tendon junction
GO:0008270 F zinc ion binding
GO:0015629 C actin cytoskeleton
GO:0016323 C basolateral plasma membrane
GO:0030018 C Z disc
GO:0030239 P myofibril assembly
GO:0031252 C cell leading edge
GO:0045177 C apical part of cell
GO:0045178 C basal part of cell
GO:0046872 F metal ion binding
GO:0051371 F muscle alpha-actinin binding
GO:0061061 P muscle structure development
Transcript
Level		FPKM:0.55 TPM:0.43
ORF EntryO_BomoMG18333_complete:A_BomoMG_comp40460_c1_seq4
Sequence
(Nucleotide)
TCATTCACAAAAATTATTCGTATACATGGTCGCCATTTACTCGCACTAGTTTTGTATGAA
TTCAACAGTTATCTTTGAAGTGGGACTTATTGAATGGTTTTACGCAGGGGAGTGTTTGTG
CGCATCAAGGACAAGAATCTTCACGTGGAATGCTTCAAGTGTTCGACTTGCGGGAGCTCT
TTGAAGAATCAGGGCTATTACAACATAAACGGTAAACTGTACTGCGACATCCACGCCAAG
CTGGTCGCACGTCAGAATCCACCAGCGCCGAACTTGGACCCTGTAACCGTGCCACCCGGT
GGCCGAGTTCCTACCAACACATACTCTACGCCTTTGCCGCCACTGTCTACCAATAACTAC
AGCAATGGATCGTCTTCGCTGTTCAGCCCTTCAAGCAACCTGTCTGGCCCGAAGCCGTTC
GGGTCGTCGGTGGGGTCCGCGTACTCTCCGTCGCTGTCCCCCCGCTCGGCGCCGCTGTCC
CCCGCGCGGCCCCTCACCGCGCCCGCCCCGCCCCCCGCCGCACCCTTCGCCCCCAAACGG
CCAGTTTCCGTTTTTAAAGGTTCCAGTGTAGGAGCTGCCACACGTGGTAAAACTTTTGGG
GTATCATCGGCACCAAAACGAGGAAGGGGAATATTGAATAAGCCTGCCCTGCCCGGCTCT
CGTGTGCCACTTTGCGCATCTTGTAATGGAAACATTAGAGGTCCATTCATCACGGCTCTT
GGACGCATATGGTGCCCCGAGCACTTCATCTGCGTGAATGCAACATGCAGACGTCCTCTG
CAGGATATCGGATTCGTCGAAGAGAACGGACAGCTCTACTGTGAATTCTGTTTTGAGCAA
TACATAGCACCCGCCTGTGACAAATGTCATGCTAAAATTAAAGGCGACTGTTTAAACGCC
ATCGGTAAACACTTCCATCCAGAGTGCTTCAACTGCGTCTATTGCGGAAAGTTGTTCGGA
AACAACCCGTTCTTCTTAGAAGACGGACTGCCATACTGCGAAGCAGATTGGAATGAGCTC
TTTACAACAAAATGTTTCGCTTGCGGATTCCCCGTGGAGGCGGGCGACAGGTGGGTCGAG
GCGCTCAACAATAACTACCACAGTCAGTGCTTCAACTGCACGGTGTGTAAAAAGAACCTT
GAAGGACAGAGCTTCTTCGCCAAGGGAGGTCGGCCTTTCTGTAAAACACACGCCCGTTAA
AAGTCCAATAAAAATAATCTACAACTCGGACACTGTTTACTCGACTACTACTTTTCGTCC
GGTTTCGCCGTTGCCAATCACGCCGCCGGCGGTCGGTACGCCGTCGCCACAGAGAACTAG
GAAGTTGGAAACACCCCTCCACTTCGATGGAGGACTGTTTTCCGACATAAGAAGTACAGA
TGGAAAGTTACTTAGCAAAGTAACGGTCGATAGGGTGCAGCGTTCCACACACCATGACGT
CATCGACTCCCCGAGTACTGTTGAGGTGCACGACAAAAATTACGTCGACGATATAATAAA
ATCCGAAACTATAATAAATCAAGACATAATAACGGTCAAATTCACTCCGGTCCCACCGGA
ATTCGATTCCCAAATGATAAGTCCGCAACTGGCCAAACGGTCCAAAACACCAATTCAATA
TCTCAAGGATGACTTTGTTGATTTGCAAAGTTACAAAATTGTGAATTCTTTATGTAAAGA
AAAACTATTAGAAGCTAATGCTTTACGGACACAATCTGCACAAGATTTGATCACATTAGA
ACCAACTGAAGTCGAAAGTAGTACTCTAGCCAAGTTTGTAAGATCTGTGAGTCAACAAAA
GCAAATTAGCTGCAGTGACAGTGATCCAATGGGCCAAGAAATTAATTCGATACCAATTAA
AATGGAGTCGGATTCTTTAACAAGTTTAGTTGAGAAATCGATCAAAACTGCAACTGTGAG
TGAAAATCGAGAGCTCGATCACTTTTTGAATACGGACTTGTCAAAAATCGAGAGGAGCCT
TAGTCCTTTGCCAAATTTCTTGATCACCGAACATTTGACAAAAATTAACAGTTACTTGCA
GGAGAGCCTTGACGTCTGCAGTGGTAACGATAGCAATAATCGGTGCACTCCGTCCATTAT
ACACGATAATGTGGAAACGAAACATGAATACTTTAGTGAGGCATTTGATTGCGTAAATGT
GCAGCAGAATATTCCTGCAAATAGTGTTTTGGACAGTTCTCAAACGGAAGAGAATTCTGT
TGATTCTCAGAACAATCGATCACTTACCGCACGCGAGAATTCTGAATATACAGACCCTAA
GAAAAGTAAGTCCACATTAAACAGTGTCCGCCGGGGACGCCCTTCGATTTTGAACGCTAT
ATCAAACATGCCGATACATTATCTCGCAACGATTTTGTGTATTTTCTTAATTGTATATAA
CCTTATATACCAATATATTAAATTAAATTGTCCAGGTAATAAAATATAATATAGATTTTA
AGATTGTTCAACGGAATTGTATGCGTTAAACTAGTCATTGCAAAACTATTCATACGTGTT
ATATCTATTAGCAAATGTATTAATTTTAGATCAGGATGTAAATAGTCACATAACACAGCT
CCCGCGTTATAATTTAACTAAATTTATCTAAAATTAACATTATGGCGCTTTTCTCACAAT
TGTGACGATTGACAATCCCTTCATATAAGCTTTGTAAACAGCTTCGGAATGTTTAAAAAA
AATATACTAACTTTAACATCTGTAAGTTTATTACATTTTTTTATAATTCATAATTTATTT
ATTGGTGCACCAATCTCATTTTGAAATTCATATTATCTTCAATGGAATTGTTCTATCGAA
ATTTATGGCTAAGATGCCTACTTGTAACGAATTTTAAGAATTAAATTAAATTTATCAAAC
AACTGTTGTCCGACAGTTACTGTCCTAGAGTACCTAATCCTAAGTACATTATATACTTTT
TATATGAATTTAGATATACAAACTTTACAGCATTATCTATCACATTTTATGATTATGTGA
GCTTAATAAAGTATTTAATTTTATAAAAAAA
(3031 bp)

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