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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40460_c1_seq3
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		PREDICTED:_PDZ_and_LIM_domain_protein_Zasp_[Bombyx_mori]
Ontology
GO:0001725 C stress fiber
GO:0001952 P regulation of cell-matrix adhesion
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005915 C zonula adherens
GO:0005925 C focal adhesion
GO:0005927 C muscle tendon junction
GO:0008270 F zinc ion binding
GO:0015629 C actin cytoskeleton
GO:0016323 C basolateral plasma membrane
GO:0030018 C Z disc
GO:0030239 P myofibril assembly
GO:0031252 C cell leading edge
GO:0045177 C apical part of cell
GO:0045178 C basal part of cell
GO:0046872 F metal ion binding
GO:0051371 F muscle alpha-actinin binding
GO:0061061 P muscle structure development
Transcript
Level		FPKM:1.60 TPM:1.26
ORF EntryO_BomoMG18328_complete:A_BomoMG_comp40460_c1_seq3
Sequence
(Nucleotide)
CGCGCCACAACTCGCTGCTTCCCCACGATCGAACGACCGACGCCCGCGCCCGGTGTCGTA
TTACAGCTCTAAATTTATCTCGTGAGCGCGATCGCCAATTTGGAAACGGTCGCGCGCCGT
GTTTTGAACTGGTGATTGACAGTGCCGAGTGAGGAGTGATCCCCCGAGCGACGTATTATC
GCCTGCCGACATGGCACAGTTAATAACTGTGCGGCTTAACAAATCAGATCATCAACCCTT
GGGCTTCAGGCTGCAAGGAGGCAAGGACTTCGGCACCCCACTAGTCGTTCAAAAGGTGAA
TGGCGGCAGTGCGGCAGAGCGGGCTGGCTTGCAGGCCGGCGACGCTCTGATTCGCGTCAA
CAACACAGACGTGTTCACCCTGCGTCACCAAGACGCGCAGGACACCATCCGCGCTGCTGG
TGCTAATTTAGAACTAACCGTTCAACGCGGGGGAGGTACATGGCGTCCATCAGTGACCCC
GACCGGCAGCTTGCCGAGACCCGGCTCTCGTCCTCTGGGAGGTACTCCGACTCCGGTGAC
GAACACATCCTTGAAGGCGAACCCACAACCGTCGCGCAATTTCGGCTCCGGGCACAACAA
TGTCGCTAAGCCTTTCGGTTATATGAACGGTAACGACACCGTCAAGAGTGTCGTGAACAA
ACAATACAACACTCCTGTCAATATATACAGCGACAAGACAATTGCGGAGACCCTGTCGGC
CCAAACCGAAGTACTGGCTGGTGGAGTACTCGGAGTTAATTTCAAGAAGAATGAGAAGAC
GTACGATGCTGAAAAAAGCGCTGTTTTCAAAGTACTTCAGGAGGAGCAAAACGACCCTGA
ACCAGAAGTGTCGACTCCGACCACCGGCTCAGTGCCCCCGGTGAGCGGACTCCGGCACGT
GCAGGCGCCCGTCACGCGACCCGACGCGCCCGTCAACAACACGGGCGGCCTGCCTCCCGG
ACAGAACATTTGCGAGGAGTGCGAACGATTAATTACGGGAGTGTTTGTGCGCATCAAGGA
CAAGAATCTTCACGTGGAATGCTTCAAGTGTTCGACTTGCGGGAGCTCTTTGAAGAATCA
GGGCTATTACAACATAAACGGTAAACTGTACTGCGACATCCACGCCAAGCTGGTCGCACG
TCAGAATCCACCAGCGCCGAACTTGGACCCTGTAACCGTGCCACCCGGTGGCCGAGTTCC
TACCAACACATACTCTACGCCTTTGCCGCCACTGTCTACCAATAACTACAGCAATGGATC
GTCTTCGCTGTTCAGCCCTTCAAGCAACCTGTCTGGCCCGAAGCCGTTCGGGTCGTCGGT
GGGGTCCGCGTACTCTCCGTCGCTGTCCCCCCGCTCGGCGCCGCTGTCCCCCGCGCGGCC
CCTCACCGCGCCCGCCCCGCCCCCCGCCGCACCCTTCGCCCCCAAACGGCCAGTTTCCGT
TTTTAAAGGTTCCAGTGTAGGAGCTGCCACACGTGGTAAAACTTTTGGGGTATCATCGGC
ACCAAAACGAGGAAGGGGAATATTGAATAAGCCTGCCCTGCCCGGCTCTCGTGTGCCACT
TTGCGCATCTTGTAATGGAAACATTAGGTGATTCAGTGTGGAAAATTGACGCAATTGATT
GTTGTGTGATGCATGAATATTATCGAGACAAGATAACTTTAGCGAGTATATAATGTCATG
CATAAAATATTTCTCTAACCATAACCATAGCAACTTTTCCTACGTTATTTGCGTTAGTCT
TACTTATTAAATATCGCACGTATTAAAACTAAAATGCTTATGTGTTTTTGATTGTTTTCC
TAACAGCTAACGATGTGCAGACCACAAGCAGTTCTCAGAAACCAGAGTTTAAAAGTCAAG
CTGAAGAACGTCTCATACGAAAAATGGCTAAAATGGCATTAAATGGATATGAAATTGGCA
TTCAACGTAAAATAAAGCCAGCCGACCACATCCAATCTATGGCTGATAAAATACAAGACA
CTGTCGTTACTAAGCATCCTCTGAATACAGATGGTTCGTCGGAGGAAAACATTCGTGAGA
ATAGTACTCTAAGAAAAATCTCCACTAACGACAACGTGTACAAAAATACAGAATTCGGTA
GTATGAATGACAGAGTTAAAGAGAGCAATTTCTTAAATTCAATCATTTTCAATGGAAGTA
CTCCAGTACCTCCGCCATTACCTACATCTCCTATACCCACTTTCAATATTCATAGTACAC
CTCTTGGAGAACCAATAGTTACGGGTAATATGAAAAAACAATCTGATTTACCTAAAAATT
TCAATATCGATTACGGCCTAGATTTCCAGAATGAAACTTTGAACGGATCCTTAAATGACA
ATGATTTTAAAATAATTGATGACCATAAAAACACAACTAACACTCTCAAAAAGACGAATG
GTTTTCAAAATTCTTTCCTGAATGGAATGAATTCAACCAAATCCGAAAAGAAACCAGATC
AAAAGTTTGAAAATAACATTTACTCTAATACATTGAATAAACGAAAATTATTTGAAAACA
AAGATGATACTAACAATTTCAAACACTCGCCATGTGACTTAAAGAATGAAAAGAAAATCA
TTGACGTATATTCAAAAGCAAATAATTCCAATCAATCTTTCAAGTTAGACGGTCACGACT
TATCTAACACAACGGAAGAGACAAAGCCGGCAGTTCTGCCGAGTTCCGTTAAAGACAATT
CATTAGTATATGACGCACATGATTCAACAACTGTCACCGATGACCCTCCATCTAAAGTTT
ATGATACCGATAATGACACATTCACCGAATCAAATACTTTAGAAAAAATAGTTAATAATA
CTGAGGAGGTTGTTAGACGACGACAGAAAAAGAACATTAGGAATGATGACGGTAGAAGGG
ATTCTCATATCATCGCCAGACCGCTTAGTACTATGACTTCTGTAGATGTTGAAGAGGGAA
TGTATCCTGTATGTCACATATGCGACAAGGCTATTACAAGAGGTCCATTCATCACGGCTC
TTGGACGCATATGGTGCCCCGAGCACTTCATCTGCGTGAATGCAACATGCAGACGTCCTC
TGCAGGATATCGGATTCGTCGAAGAGAACGGACAGCTCTACTGTGAATTCTGTTTTGAGC
AATACATAGCACCCGCCTGTGACAAATGTCATGCTAAAATTAAAGGCGACTGTTTAAACG
CCATCGGTAAACACTTCCATCCAGAGTGCTTCAACTGCGTCTATTGCGGAAAGTTGTTCG
GAAACAACCCGTTCTTCTTAGAAGACGGACTGCCATACTGCGAAGCAGATTGGAATGAGC
TCTTTACAACAAAATGTTTCGCTTGCGGATTCCCCGTGGAGGCGGGCGACAGGTGGGTCG
AGGCGCTCAACAATAACTACCACAGTCAGTGCTTCAACTGCACGGTGTGTAAAAAGAACC
TTGAAGGACAGAGCTTCTTCGCCAAGGGAGGTCGGCCTTTCTGTAAAACACACGCCCGTT
AAAAGTCCAATAAAAATAATCTACAACTCGGACACTGTTTACTCGACTACTACTTTTCGT
CCGGTTTCGCCGTTGCCAATCACGCCGCCGGCGGTCGGTACGCCGTCGCCACAGAGAACT
AGGAAGTTGGAAACACCCCTCCACTTCGATGGAGGACTGTTTTCCGACATAAGAAGTACA
GATGGAAAGTTACTTAGCAAAGTAACGGTCGATAGGGTGCAGCGTTCCACACACCATGAC
GTCATCGACTCCCCGAGTACTGTTGAGGTGCACGACAAAAATTACGTCGACGATATAATA
AAATCCGAAACTATAATAAATCAAGACATAATAACGGTCAAATTCACTCCGGTCCCACCG
GAATTCGATTCCCAAATGATAAGTCCGCAACTGGCCAAACGGTCCAAAACACCAATTCAA
TATCTCAAGGATGACTTTGTTGATTTGCAAAGTTACAAAATTGTGAATTCTTTATGTAAA
GAAAAACTATTAGAAGCTAATGCTTTACGGACACAATCTGCACAAGATTTGATCACATTA
GAACCAACTGAAGTCGAAAGTAGTACTCTAGCCAAGTTTGTAAGATCTGTGAGTCAACAA
AAGCAAATTAGCTGCAGTGACAGTGATCCAATGGGCCAAGAAATTAATTCGATACCAATT
AAAATGGAGTCGGATTCTTTAACAAGTTTAGTTGAGAAATCGATCAAAACTGCAACTGTG
AGTGAAAATCGAGAGCTCGATCACTTTTTGAATACGGACTTGTCAAAAATCGAGAGGAGC
CTTAGTCCTTTGCCAAATTTCTTGATCACCGAACATTTGACAAAAATTAACAGTTACTTG
CAGGAGAGCCTTGACGTCTGCAGTGGTAACGATAGCAATAATCGGTGCACTCCGTCCATT
ATACACGATAATGTGGAAACGAAACATGAATACTTTAGTGAGGCATTTGATTGCGTAAAT
GTGCAGCAGAATATTCCTGCAAATAGTGTTTTGGACAGTTCTCAAACGGAAGAGAATTCT
GTTGATTCTCAGAACAATCGATCACTTACCGCACGCGAGAATTCTGAATATACAGACCCT
AAGAAAAGTAAGTCCACATTAAACAGTGTCCGCCGGGGACGCCCTTCGATTTTGAACGCT
ATATCAAACATGCCGATACATTATCTCGCAACGATTTTGTGTATTTTCTTAATTGTATAT
AACCTTATATACCAATATATTAAATTAAATTGTCCAGGTAATAAAATATAATATAGATTT
TAAGATTGTTCAACGGAATTGTATGCGTTAAACTAGTCATTGCAAAACTATTCATACGTG
TTATATCTATTAGCAAATGTATTAATTTTAGATCAGGATGTAAATAGTCACATAACACAG
CTCCCGCGTTATAATTTAACTAAATTTATCTAAAATTAACATTATGGCGCTTTTCTCACA
ATTGTGACGATTGACAATCCCTTCATATAAGCTTTGTAAACAGCTTCGGAATGTTTAAAA
AAAATATACTAACTTTAACATCTGTAAGTTTATTACATTTTTTTATAATTCATAATTTAT
TTATTGGTGCACCAATCTCATTTTGAAATTCATATTATCTTCAATGGAATTGTTCTATCG
AAATTTATGGCTAAGATGCCTACTTGTAACGAATTTTAAGAATTAAATTAAATTTATCAA
ACAACTGTTGTCCGACAGTTACTGTCCTAGAGTACCTAATCCTAAGTACATTATATACTT
TTTATATGAATTTAGATATACAAACTTTACAGCATTATCTATCACATTTTATGATTATGT
GAGCTTAATAAAGTATTTAATTTTATAAAAAAA
(5313 bp)

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