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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40460_c1_seq1
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		PREDICTED:_PDZ_and_LIM_domain_protein_Zasp-like_[Papilio_xuthus]
Ontology
GO:0001725 C stress fiber
GO:0001952 P regulation of cell-matrix adhesion
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005915 C zonula adherens
GO:0005925 C focal adhesion
GO:0005927 C muscle tendon junction
GO:0008270 F zinc ion binding
GO:0015629 C actin cytoskeleton
GO:0016323 C basolateral plasma membrane
GO:0030018 C Z disc
GO:0030239 P myofibril assembly
GO:0031252 C cell leading edge
GO:0045177 C apical part of cell
GO:0045178 C basal part of cell
GO:0046872 F metal ion binding
GO:0051371 F muscle alpha-actinin binding
GO:0061061 P muscle structure development
Transcript
Level		FPKM:8.88 TPM:7.01
ORF EntryO_BomoMG18322_5prime_partial:A_BomoMG_comp40460_c1_seq1
Sequence
(Nucleotide)
CCCCGCCGCACCCTTCGCCCCCACTAACGATGTGCAGACCACAAGCAGTTCTCAGAAACC
AGAGTTTAAAAGTCAAGCTGAAGAACGTCTCATACGAAAAATGGCTAAAATGGCATTAAA
TGGATATGAAATTGGCATTCAACGTAAAATAAAGCCAGCCGACCACATCCAATCTATGGC
TGATAAAATACAAGACACTGTCGTTACTAAGCATCCTCTGAATACAGATGGTTCGTCGGA
GGAAAACATTCGTGAGAATAGTACTCTAAGAAAAATCTCCACTAACGACAACGTGTACAA
AAATACAGAATTCGGTAGTATGAATGACAGAGTTAAAGAGAGCAATTTCTTAAATTCAAT
CATTTTCAATGGAAGTACTCCAGTACCTCCGCCATTACCTACATCTCCTATACCCACTTT
CAATATTCATAGTACACCTCTTGGAGAACCAATAGTTACGGGTAATATGAAAAAACAATC
TGATTTACCTAAAAATTTCAATATCGATTACGGCCTAGATTTCCAGAATGAAACTTTGAA
CGGATCCTTAAATGACAATGATTTTAAAATAATTGATGACCATAAAAACACAACTAACAC
TCTCAAAAAGACGAATGGTTTTCAAAATTCTTTCCTGAATGGAATGAATTCAACCAAATC
CGAAAAGAAACCAGATCAAAAGTTTGAAAATAACATTTACTCTAATACATTGAATAAACG
AAAATTATTTGAAAACAAAGATGATACTAACAATTTCAAACACTCGCCATGTGACTTAAA
GAATGAAAAGAAAATCATTGACGTATATTCAAAAGCAAATAATTCCAATCAATCTTTCAA
GTTAGACGGTCACGACTTATCTAACACAACGGAAGAGACAAAGCCGGCAGTTCTGCCGAG
TTCCGTTAAAGACAATTCATTAGTATATGACGCACATGATTCAACAACTGTCACCGATGA
CCCTCCATCTAAAGTTTATGATACCGATAATGACACATTCACCGAATCAAATACTTTAGA
AAAAATAGTTAATAATACTGAGGAGGTTGTTAGACGACGACAGAAAAAGAACATTAGGAA
TGATGACGGTAGAAGGGATTCTCATATCATCGCCAGACCGCTTAGTACTATGACTTCTGT
AGATGTTGAAGAGGGAATGTATCCTGTATGTCACATATGCGACAAGGCTATTACAAGAGG
TCCATTCATCACGGCTCTTGGACGCATATGGTGCCCCGAGCACTTCATCTGCGTGAATGC
AACATGCAGACGTCCTCTGCAGGATATCGGATTCGTCGAAGAGAACGGACAGCTCTACTG
TGAATTCTGTTTTGAGCAATACATAGCACCCGCCTGTGACAAATGTCATGCTAAAATTAA
AGGCGACTGTTTAAACGCCATCGGTAAACACTTCCATCCAGAGTGCTTCAACTGCGTCTA
TTGCGGAAAGTTGTTCGGAAACAACCCGTTCTTCTTAGAAGACGGACTGCCATACTGCGA
AGCAGATTGGAATGAGCTCTTTACAACAAAATGTTTCGCTTGCGGATTCCCCGTGGAGGC
GGGCGACAGGTGGGTCGAGGCGCTCAACAATAACTACCACAGTCAGTGCTTCAACTGCAC
GGTGTGTAAAAAGAACCTTGAAGGACAGAGCTTCTTCGCCAAGGGAGGTCGGCCTTTCTG
TAAAACACACGCCCGTTAAAAGTCCAATAAAAATAATCTACAACTCGGACACTGTTTACT
CGACTACTACTTTTCGTCCGGTTTCGCCGTTGCCAATCACGCCGCCGGCGGTCGGTACGC
CGTCGCCACAGAGAACTAGGAAGTTGGAAACACCCCTCCACTTCGATGGAGGACTGTTTT
CCGACATAAGAAGTACAGATGGAAAGTTACTTAGCAAAGTAACGGTCGATAGGGTGCAGC
GTTCCACACACCATGACGTCATCGACTCCCCGAGTACTGTTGAGGTGCACGACAAAAATT
ACGTCGACGATATAATAAAATCCGAAACTATAATAAATCAAGACATAATAACGGTCAAAT
TCACTCCGGTCCCACCGGAATTCGATTCCCAAATGATAAGTCCGCAACTGGCCAAACGGT
CCAAAACACCAATTCAATATCTCAAGGATGACTTTGTTGATTTGCAAAGTTACAAAATTG
TGAATTCTTTATGTAAAGAAAAACTATTAGAAGCTAATGCTTTACGGACACAATCTGCAC
AAGATTTGATCACATTAGAACCAACTGAAGTCGAAAGTAGTACTCTAGCCAAGTTTGTAA
GATCTGTGAGTCAACAAAAGCAAATTAGCTGCAGTGACAGTGATCCAATGGGCCAAGAAA
TTAATTCGATACCAATTAAAATGGAGTCGGATTCTTTAACAAGTTTAGTTGAGAAATCGA
TCAAAACTGCAACTGTGAGTGAAAATCGAGAGCTCGATCACTTTTTGAATACGGACTTGT
CAAAAATCGAGAGGAGCCTTAGTCCTTTGCCAAATTTCTTGATCACCGAACATTTGACAA
AAATTAACAGTTACTTGCAGGAGAGCCTTGACGTCTGCAGTGGTAACGATAGCAATAATC
GGTGCACTCCGTCCATTATACACGATAATGTGGAAACGAAACATGAATACTTTAGTGAGG
CATTTGATTGCGTAAATGTGCAGCAGAATATTCCTGCAAATAGTGTTTTGGACAGTTCTC
AAACGGAAGAGAATTCTGTTGATTCTCAGAACAATCGATCACTTACCGCACGCGAGAATT
CTGAATATACAGACCCTAAGAAAAGTAAGTCCACATTAAACAGTGTCCGCCGGGGACGCC
CTTCGATTTTGAACGCTATATCAAACATGCCGATACATTATCTCGCAACGATTTTGTGTA
TTTTCTTAATTGTATATAACCTTATATACCAATATATTAAATTAAATTGTCCAGGTAATA
AAATATAATATAGATTTTAAGATTGTTCAACGGAATTGTATGCGTTAAACTAGTCATTGC
AAAACTATTCATACGTGTTATATCTATTAGCAAATGTATTAATTTTAGATCAGGATGTAA
ATAGTCACATAACACAGCTCCCGCGTTATAATTTAACTAAATTTATCTAAAATTAACATT
ATGGCGCTTTTCTCACAATTGTGACGATTGACAATCCCTTCATATAAGCTTTGTAAACAG
CTTCGGAATGTTTAAAAAAAATATACTAACTTTAACATCTGTAAGTTTATTACATTTTTT
TATAATTCATAATTTATTTATTGGTGCACCAATCTCATTTTGAAATTCATATTATCTTCA
ATGGAATTGTTCTATCGAAATTTATGGCTAAGATGCCTACTTGTAACGAATTTTAAGAAT
TAAATTAAATTTATCAAACAACTGTTGTCCGACAGTTACTGTCCTAGAGTACCTAATCCT
AAGTACATTATATACTTTTTATATGAATTTAGATATACAAACTTTACAGCATTATCTATC
ACATTTTATGATTATGTGAGCTTAATAAAGTATTTAATTTTATAAAAAAA
(3530 bp)

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