SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40448_c3_seq1
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_phosphatase_and_actin_regulator_1_isoform_X3_[Papilio_xuthus]
Ontology
GO:0001755 P neural crest cell migration
GO:0001843 P neural tube closure
GO:0003779 F actin binding
GO:0005737 C cytoplasm
GO:0007266 P Rho protein signal transduction
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0008157 F protein phosphatase 1 binding
GO:0030027 C lamellipodium
GO:0030036 P actin cytoskeleton organization
GO:0042995 C cell projection
GO:0043085 P positive regulation of catalytic activity
GO:0048484 P enteric nervous system development
GO:0051726 P regulation of cell cycle
GO:0061386 P closure of optic fissure
GO:0071862 F protein phosphatase activator activity
GO:2001045 P negative regulation of integrin-mediated signaling pathway
Transcript
Level		FPKM:10.57 TPM:8.35
ORF EntryO_BomoMG18253_complete:A_BomoMG_comp40448_c3_seq1
Sequence
(Nucleotide)
AGGTCTTAGTTACCAGGTCCTAAATTCCTTTAAAAAAAAAGGTGTTGAAATTGAGAATTC
CGTCACACCTTGTATATTCGTTTGGTTATTTGAGTATGTGTGAAAGTGTATTTAATCACA
TACATCCTTTTTTTTATTTATTGAAACAGATCGTAAACATGGCGCTTCCTATCACTAAAG
ACTTATTCAGCCTTGCTTGAAAAAGAAAGACTAGTTCGTCTTAGTGCCAAATGGTACGTG
GTGTAGAGGTTGTAGGTATTGGGGATAAGCTCTGAATCAAATGGTGCGATGGCAAAAATA
ATATTATATCAGACAATTCTTCACAGCACTCCCCATAAAACATACGGCACAAGACACAAA
GAGAACCAAATTATGTCCGTGGGTAAATCTAAAAAAACAGTACAGTTGAGTTGCAATGAA
ATTTTCAACGTAACATCATTTTGAATACAATAATAACGACATCGTAACTCTCTGCTAATA
TTATTTCACAAAGATGTTAATGTTAATACAGAACTTTTATAAATATAGAGATAACTACAT
ATATCGATAAACATCTAAGTATTTTTTTCCTTATTTTTAATTGCAAATCTAACAAAATTT
ATTAGAAAAATAAGTCGTCATTTTGGCTTCCACTTTATTCTATAATGGAATGGTCTCAAG
AGTAACCACAGCATACAAACGTTTTATATAGCTCGCTACCATAATAACATCGTATTACTT
TTAATTAGTATTACAAAATTGCACATTTACGCCGCTCAACCATCAGTGTGAAAACATTAA
CATAATAACATTTTGTTACTTTACATATTGCATTGCTTTCAAATACATTCCATTGTAAAT
TGACTCGAATTCTTGATAACAATTAAATCCAAATTTGTATAAAATCATTTTGCGAATACA
AAACATGAAGAACTAACTACAGATCAACAAATTTGGCATAATTCAATAATTCAGGTCGAA
CATTTAGAATAGTACCTGTGTTTTTTTTTTAAAGTACAATATAATGACATTGCTTTTATG
CGATCAAATTTTCATAGAATATTCATGTGTTTAATTACGAAAAACATTACAAAAATGGCA
CCACTACTGAACAATATGTCGCGTTTATAAAAAAAAATACATAACATAATATAACCAATA
CCTAACTACGTATTACTCTATAAGAAAGTCATCTATACAGTAATATAAAACGTCGTAACT
CTAACGTCGAAAGAGTCGACAAAGGATCACGCAGCAGTATTATTGCTCATTTTAGTATCG
AATCACTTTCGTTACACCACAACAAAGACGGAAAACGAATCACGTGAACCGATCACGTAA
GCGATCACCGCGTAATCTCACAAGGCGCTTCGACGTTAATTCACAAGAATAACAACTACA
TCTTTATAAGAGCTTATTATTCGATCAATATCGATACTTCGTTAAGTTTCAAGAGGTTTA
CCCTAATCCCTACTCTAGTGCGACATGACGTCTAACAATTTGCTCCCGCCGAGTTTGCTC
GTGTCGTACAGATTACGCAATAGACAACTAACTAAACGTCTCTTAAAAATTGAGCTCAAC
ACTAGTGTTATCTGTGACACGGCACGACCGTGCGGAGGCGCCCTTAGCAAACACCGACTC
TGTCCCTGTACTTGGCAATCTGTATGGATCAGACGCTTGCTACAAAATTAATTTCTCGTA
ATATGATTGCTTTATTTAGCTAGTCAACTGAATGGAAAATATATGGTATTTTTTTAAAAT
TCAAATTTGACTGTACGCGTGTTAATTTATTATCTGAATACTCTGGTCAACGGAAGATTT
TGAAAACAGAAATTCACTAAATATAATTAATTGAGCGTTTGATTCATCGATCAAAACAGC
AATAGTATACAAAAATTATTTTATTATTAAAATTCGAATATACATTTAGGTAGCTACGCA
TTATTTATTTTTTAAATATGGTAATTTTAATAAACCAAATTATGTTAAAAATGTTTCACG
TCGCCTATTATTATAATTTAAAAAAAAGTAATTCTAAGAATTATAATAACAATCTTCAAT
GAAATCACAAAACGGAACTTCTCGTTCAAGTATGAGTAAGTTACCCATCAACCGCTGTCA
AGGCAGAGGTTAGCAAAGTATACCTACTCTAAATTCTGGGATACATTATTAGAAACGATT
TTTGAAAATCTTGTGACAGTTAAATACGGGTTTAAGAAACGCATTTAATAAATAAAAGTT
AACCAATCTAGCTTAATGACTACGAAGCTAAAAGCGCTATGAATATTAGAAAAAATCACA
AATTCTCATAAAGTTACATGGTGGACGAGTGTCTTGCAACTGACATAGTTACGCGCAAAC
CTCACGATTCGTAACGAACGAGCACAATCTCCACCACGTAATCAGTATCACTAACCTTCC
GCGAAGGTCAATACGAAGAATGTATAGGTACGTCCGGGGACTGTCGGCACGAAATGAACC
TCCGGACTCGACGACTGCCTTACGATAACTAGACCAACAACAGGACCGCACTGGCGCAGT
AGCAGCCGCGGCTCCGCGACGACGGCGCCGCGCGGCTTTAGAACATTCAACCCTTTACCG
ACTCGACGCGGTGAGCTATCGGAGTGGTCAACGTGGACAAGCGGAGGCGCGCGCACCCGT
CCGGCTCGCGGGCTCAGCCGCCGCGCCGCGCCGCGCCGCCCGCTGCGAGCCTCGGCCGTC
ATGGTCTGTGGAATCTAGTGAGGTGTTTGCTGTCCTCGTGCACCGCCATCTCGGAGCTCT
TAAACTCGTTGAGTTCGCGGCGGATCGCGGCCTTGTCCCGCGGCGTGAGGCGAGTCCACG
GCTTGTCGGCGCGACGGTCGTAGTCGTGGGCTTGAGTAACCTCGATGTAGTCGCTGAAGC
GGATAATTTTCTTCTCTTTGAGCTCATCTACCGTGGGTCGGAA
(2923 bp)

- SilkBase 1999-2023 -