SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40444_c1_seq4
Scaffold_idBomo_Scaf020
NCBI non-redundant
(nr)		PREDICTED:_negative_elongation_factor_A_[Bombyx_mori]
Ontology
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0032021 C NELF complex
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051571 P positive regulation of histone H3-K4 methylation
Transcript
Level		FPKM:0.34 TPM:0.27
ORF EntryO_BomoMG18202_complete:A_BomoMG_comp40444_c1_seq4
Sequence
(Nucleotide)
CGTTACCAAAAATATGTGCTAAAACTTGCAAAATGATATGGAATGTGGATATATCATTAA
TTCTACGATGAAGGGTGGACTGTGTATCATCTACACGTCTTTGCTGACTATTTCCGTGAT
TTCTAGTTGTGCACTCTTTATTCTTGTTGTCTCAGAGGCTCTAAACGAGGGTGTAGATAA
GAGCGTTGACCTATCAGGCCTTCACAATGTTAGCCAGAAGAGTAGCACTATCAGTAATGA
TGAGGTTGATGAACCAAATATACCGGCAGAAGTTTCACAATTTGCACACACCGAGCCAGT
GGAAGCACAGGAACCTGAGAGACAAGAGATGACCTTCCCTGAGTCATTGTCTCTGAACTC
TGTGACCACTGATGGCGAGAACAGATGCTGGAAGCCCAGGATATGTTCAGAAATGCAAAT
CGTGTTACGAGACCGGAAAAAGCTCTTATACTTGGTTTTATGGCTGGATCTAGAGATAAT
CCGTGTCCGAACCTCGGCAATATTGTTACGATAAAACTCTCTGAAAACATTGAGAATGTT
CTACAGTCGGACGACACGTATCTCACTATGCTCTCAGAGATGCATTTCCAAATGAACTAC
AACAATGGACAGTGGACTAGACTCAAGAAGTACCGACCTATAGACGGCATGGTGCCGCAG
AAGATACCTCCAGGATCCACTGTGATATCAGCCGGGAATCAGCAACCTGTAGTTTCAATA
GCCAACCAAACGATTAGCTAATGTGCTTCAGTGATAAATGACTTTGACATTATCAAGTGC
TCTCAACTAAAGTGTTGAAATGTGTTTAATGTGCTTGTGGCCCCAGTATCATGCGTGACA
GGTTCGAGACTGGCCACTTACTGTGCTATTTCAATTTTACTGAATGTGACGTGAAATTAT
ATCGGTAGGTATGCATAATATTATTGATGTGAGACAATACAATCAGAACTGATGCAAATT
CTAAAGTAATTTATGAAAATTATTACACTGTGCGGTATCAAAAGTAGCAAATGTAAGTAC
AGAATATAAGAAGTTTTTAACTGTTCTTTATACAACCCCCAAAATGATCTATTATAATGT
GTGTAATGTATATTATACCATTTATCTTTCTATAAAGAAATTGATAAGAAAAAAAAAATA
TCTTCAAATTCACATAGTTAAAACTCCTTTTATGTTTTAATCTCGGGTTTCTCATTTTCA
ATTGAGATTTTTTTTTTATTGCCTTTGTAGGTAGACGAGCATACGGCCTACTGAAGGTAA
TGGTTACCGTCGCCTATGGGCCTCAGCAATTCCAGGGGCAGAGCCA
(1306 bp)

- SilkBase 1999-2023 -