SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40444_c1_seq2
Scaffold_idBomo_Scaf020
NCBI non-redundant
(nr)		PREDICTED:_negative_elongation_factor_A_[Bombyx_mori]
Ontology
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0032021 C NELF complex
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051571 P positive regulation of histone H3-K4 methylation
Transcript
Level		FPKM:3.31 TPM:2.61
ORF EntryO_BomoMG18198_5prime_partial:A_BomoMG_comp40444_c1_seq2
Sequence
(Nucleotide)
CCCCGCACGCCGGCCCGCGGCCCCCCCGCCTCTCGCCAGCCCCATACTCGTACAGGGTCC
TTCTGGTGGCAAGTTGGTGCTAGCAAGCGGTGGGAAGCCGGTTCTGGTGCCGGCACTGCT
TAACTCCTCAGCCGTGTTACTGCAGCCTGGTGGAAAAGCTGTGTTACTGCATAATATTAA
ACAGGTCACCCAGCCCGTGGTCCAGCAACAACAGCGGACAACTGTTCCCGTACCAGCCTT
ACATCAGACGCAGACTTTACATCATCAAATACCACAGACGCAGGTGCAGATTCAACAGCA
AGTACAGCAGCCCACTCCCGTGCAGCCGGCGCCCCAACCAGCCGCCACGCCTCTACTGCC
CAGACGAGGACTTTCCCTTACGCGAGAACAGATGCTGGAAGCCCAGGATATGTTCAGAAA
TGCAAATCGTGTTACGAGACCGGAAAAAGCTCTTATACTTGGTTTTATGGCTGGATCTAG
AGATAATCCGTGTCCGAACCTCGGCAATATTGTTACGATAAAACTCTCTGAAAACATTGA
GAATGTTCTACAGTCGGACGACACGTATCTCACTATGCTCTCAGAGATGCATTTCCAAAT
GAACTACAACAATGGACAGTGGACTAGACTCAAGAAGTACCGACCTATAGACGGCATGGT
GCCGCAGAAGATACCTCCAGGATCCACTGTGATATCAGCCGGGAATCAGCAACCTGTAGT
TTCAATAGCCAACCAAACGATTAGCTAATGTGCTTCAGTGATAAATGACTTTGACATTAT
CAAGTGCTCTCAACTAAAGTGTTGAAATGTGTTTAATGTGCTTGTGGCCCCAGTATCATG
CGTGACAGGTTCGAGACTGGCCACTTACTGTGCTATTTCAATTTTACTGAATGTGACGTG
AAATTATATCGGTAGGTATGCATAATATTATTGATGTGAGACAATACAATCAGAACTGAT
GCAAATTCTAAAGTAATTTATGAAAATTATTACACTGTGCGGTATCAAAAGTAGCAAATG
TAAGTACAGAATATAAGAAGTTTTTAACTGTTCTTTATACAACCCCCAAAATGATCTATT
ATAATGTGTGTAATGTATATTATACCATTTATCTTTCTATAAAGAAATTGATAAGAAAAA
AAAAATATCTTCAAATTCACATAGTTAAAACTCCTTTTATGTTTTAATCTCGGGTTTCTC
ATTTTCAATTGAGATTTTTTTTTTATTGCCTTTGTAGGTAGACGAGCATACGGCCTACTG
AAGGTAATGGTTACCGTCGCCTATGGGCCTCAGCAATTCCAGGGGCAGAGCCA
(1313 bp)

- SilkBase 1999-2023 -