SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40437_c1_seq1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_cytoplasmic_aconitate_hydratase-like_isoform_X2_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0003994 F aconitate hydratase activity
GO:0005737 C cytoplasm
GO:0006099 P tricarboxylic acid cycle
GO:0006879 P cellular iron ion homeostasis
GO:0008152 P metabolic process
GO:0010040 P response to iron(II) ion
GO:0016829 F lyase activity
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
Transcript
Level		FPKM:15.67 TPM:12.38
ORF EntryO_BomoMG18169_complete:A_BomoMG_comp40437_c1_seq1
Sequence
(Nucleotide)
AAAAACTCGTGGTTGAATACTGTGACGTGAATTGATACAAAACCTAATCTCATTAAATAC
TCGATTAACATAAACTGAACCATAATCAATCTCTAGTGTTATTGGCGACGTGACTTTTCG
GCTATCAACTATGGCTGGATCCACGAATCCTTACCAGAAGCTGCTGAAGACGATTGAAAT
TAACGGCTCTACTTACACCTACTACGATGTATCAGCCCTTGGACCTAAATACGATCGTCT
CCCGTTCAGCATCAGGGTACTTCTCGAGTCATGCGTGAGGAACTGCGACAACTTCCAGGT
CTTGGAGAAGGATGTCAGCAACGTCCTGGACTGGGAGTCGAAGCAGGGCAACGAGGAATC
CGTGGAGATCGCCTTCAAACCTGCCAGGGTTATTTTACAGGACCTGACAGGCGTACCAGC
GGTGGTAGACTTCGCGGCGATGCGTGACGCCGTGAAGGACCTGGGCGGTGACCCGGACAG
GATCAACCCGATATGCCCCGCTGACCTGGTCATAGACCACTCCGTGCAGGTCGACTTCGC
GAGGACACCTGACGCTCTGAACAAGAACCAGGACTTGGAGTTCGTGAGGAACAAGGAGAG
GTTTCAGTTTCTGAAGTGGGGAGCGCAGGCCTTCGACAACATGCTCATAGTCCCGCCGGG
CTCCGGGATCGTGCACCAAGTGAACTTGGAGTACCTGGCGCGCGTGGTGTTCACCGGCCC
GCTCCTGCACCCCGACTCCGTGGTCGGCACCGACAGCCACACCACCATGATCAACGGGCT
GGGAGTCGTCGGGTGGGGAGTGGGAGGCATCGAGGCGGAAGCCGTGATGCTGGGACAGGC
GATCAGCATGCTGCTGCCCAAAGTCGTCGGCTACAAGCTCGTTGGAGAACTGAACCCGTT
AGCCACGTCCACCGACCTGGTGCTCACGATAACGAAGCACCTGCGCTCGCTGGGCGTGGT
CGGCAAGTTCGTGGAGTTCTTCGGTCCCGGGGTGGGGGCGCTGAGCATCGCCGACCGCGC
CACCGTCGCCAACATGTGCCCAGAGTTCGGGGCCACACTGGCGCACTTCCCGGTCGACGC
GCGCTCGCTGGAGTACCTGCACCAGACCAACCGTCCCAAAGAGAAGATCGACGTGATCGA
ATCGTACCTGCGCGCCACGAAGCAGTTCAGGGACTACACCAATCCCGAACAAGATCCCGT
GTTCTCAGAGGTGGTGGAGCTGGACCTGGGAGACGTGGTGACGTCCGTGAGCGGGCCCAA
GCGGCCCCAGGACCGCGTGTCCGTCGCCATCATGAAGAAGGACTTCCAGGACTGCTTAAC
CAATAAGGTCGGCTTCAAAGGCTACGGCCTGAGTCCGTCCCAGCTGTCCGCCTCCGGGGA
CTTCACATACAGCGACGGAAAGACTTACACCATCACCCACGGCTCTGTTATCATAGCGGC
CATAACTTCGTGCACGAACACGTCCAATCCAAGCGTGATGCTCGGAGCTGGGCTCCTCGC
AAAGAAAGCCGTTGAGAATGGACTATCCGTTCTTCCGTATATCAAGACATCGCTGTCTCC
GGGCTCCGGAGTGGTCACGTATTATCTAAGGGAGTCTGGGGTGGTCCCGTACCTGGAGAA
GCTCGGCTTCAACACGGTGGGCTACGGGTGCATGACCTGCATCGGCAACTCCGGACCCAT
CGACGACAACATCGCGAACACCATCGAAAAGAACGAGCTAGTCTGCTGCGGCATCCTGTC
CGGGAACAGAAACTTCGAGGGCCGCATCCACCCGAACACCAGAGCCAACTACCTGGCGTC
TCCGCTGCTCGTCATAGCCTACGCGCTGGCCGGGACCGTGGACGTGGACTTCGAGACCGA
ACCATTGGGGAAGCGCCCCGACGGCTCGGCGGTGTACCTGCGCGACATCTGGCCCACCCG
CGCGGAGATACAGCGCGTCGAGAACCAGTTCGTCATCCCCGGGATGTTTAAGGAGGTGTA
CGCGCGGATCGAGCAGGGCTCGGCGGCGTGGCAGGCGCTGGACGTGCCGCGCGGCCGCCT
GTACAGCTGGGACGCGAACTCCACCTACATCAAGAAGCCCCCATTTTTCGACGGAATGAC
CAAGGAGCTGCCGGCGGCGACGAGCGTGCGGGGCGCGCGCTGCCTGCTGCTGCTGGGCGA
CTCGGTGACCACGGATCACATCTCGCCGGCGGGATCCATCGCGCGGAACTCGCCAGCAGC
GAGATACCTCGCGCAGCGCGGGCTGACAGCCAGGGAGTTCAACTCGTACGGATCTCGGCG
CGGGAACGACGCGGTGATGTCCAGGGGCACGTTTGCGAACATCCGCATCGTCAACAAGAT
GGCGCCGGCCCCCGGACCCAAGACCACGCACCACCCCTCCGGTGACGTCATGGACATCTT
CGATGCTGCCGAGAGATACGCGTCAGAGGACGTCCCCCTCATTGCCATCGTCGGGAAGGA
CTACGGATCCGGGTCCAGCCGGGACTGGGCGGCCAAAGGACCTTACCTCCTGGGCATAAA
GGCGGTGATAGCGGAGTCGTTCGAGCGGATCCATCGCTCGAACCTGGTCGGGATGGGTCT
CCTCCCGCTGCAGTTCCTGCCCGGGGAGAGCGCGGCCACGCTCGGGCTGACGGGGGCGGA
GCGCTACGACATCATCCTGCCGCCCGCGCTGGCGCCCGGCCAGACCGCGACCGTACAGGT
GGACAACGGCACCTCGTTCCAGGTGGTCGTACGGTTCGACACGGAAGTCGACCTGACCTA
CTTCAAGAACGGCGGCATCTTGAACTACATGGTGCGAAAGATGCTTTGACTCCATCCGGC
GCAGCCTCCACCGCGACCGAAGCTCAGCGATGACTCCGGACTCCACCAGACCGGTCATGC
CGCTTGTAACACGAAGACATTAGCGGATGAAGGGGTTAAGTACCGTTTTTAACACTAATC
ATACCAACACT
(2951 bp)

- SilkBase 1999-2023 -