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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40418_c0_seq3
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		PREDICTED:_P-element_somatic_inhibitor_isoform_X1_[Bombyx_mori]
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0010628 P positive regulation of gene expression
GO:0044822 F RNA binding
Transcript
Level		FPKM:25.55 TPM:20.18
ORF EntryO_BomoMG18054_complete:A_BomoMG_comp40418_c0_seq3
Sequence
(Nucleotide)
GGGCGACGACATCTTGAAACGCAATCTTTTATGTCTATGGTTCGCGTCGTTCTTTGGGCT
CGCAAGATTGCGAGTAAATTTGTTTCAATTTATAGTTTTAGGTCTTTTTGACCTTTTTTT
TTTCATGGCTGCGTAAAAACGCGGTTGAAAGTGCAGATTGTTCCAAACATGAGTGATTAT
TCTTCTATGGCTACGCTCCAAAATAATAGTCAAACGGCGGGATACGCGACTGCTGTACAA
CGTGCGAGACAGGTAGCTGCTAAGATTGGTGGTGGTAGCAAGAGGCCATTGGAAGACGGA
CCAGAACCAACACCAAAGAAATTAGCACCAGTTGAGCCGGTTTATACACCACAACCTCCA
GTTATGAATTTTGTTGACAGTGTATCGCCAGTTGCGGTTGGTGGTGGCGGACGTATGATA
GCAGGTGCGGGCCCTGGCAGTGGACCAACAAATTTATTGCCCGATCAGAGCATCAATGAA
TACATCAGAGTACCTGATCGTATGGTTGGACTAATAATTGGACGTGGTGGAGAACAAATC
ACCAGACTGCAAGCAGAATCCGGTTGCAAGATACAAATGGCACCACCCACTGATGGAAAT
CCTGATAGGCTATGCACGCTTACTGGTTCTAGAGATGCTATACAGAGAGCTAAAGAATTA
GTGAACCAAATTGTGAATCATCGAGGAAGGGAGAACGCTCCACAACATCAAGACCCTTCA
GAACCTGGAATGAACATGAGCAGGCCAGGCCCTAATGCAATGGAAGAGATCATGATCCCC
GGCGCCAAAGTTGGCCTGATCATTGGCAAGAATGGCAAAACAATAAAACAACTCCAAGAA
CAAACTGGAGCCAAGATGGTCGTAATACAGGATGGACCTAATGAAAATTCATTTAAACCG
CAGGAGAAGCCTTTGCGTATATCCGGCGATCCGGCCAAGGTTGAGCACGCGAAGCAGCTC
GTGTTCGAGCTCCTCGCCAACAAGGACATGCAGGAGCCGCCGCGCCCCTACGACGACGGC
TACGGCGGCTCCGACCCCGGGAACGGACTCGCCACCACTTCCGCTGAGGTTTTAGTCCCA
AAAGTGGCTATTGGTGTTGTAATCGGCCATAAGGGTAAAATGATAAAGAAGATACAAGCG
GACACCGGATGTAGGGTCCAGTTCAATCAAGAGCATGATGAGGAACCAGGGGATAAACTA
TGCTACTTGCAGGGGAAACCCCATCAGCTAGATCAAGCTCGTCAGATGATCGAAGATCTT
ATATCTAGTGTCAAAAGATGTGAGGAGGACAGTCGGAGCCGTGCAGTACGCGGTCAGGGC
CAGCAGAACGGCGACAGGGGCGGCATGGAGTACGGGCAGCAGTGGCCCGACCGACCAGAG
ATGCGCGTCACCTTCACCATCCACGGACCCAAGTGCGGCCTGGTCATTGGCAGAGGTGGT
GAAATCATAAAGCAAATAAACGCTCAGTCCGGAGCCCACTGCGAACTAGACAGGAGATGC
CAGAGTAATGACAGGAACACAAGGACGTTTATAATCAGAGGACATCCAGAAGCAGTTGAG
ACTTGTAAACGAATTATCATGGAGAAAGTTGGTGGGCCTGTCAACTTTATCCCGGAAGGC
AACGGTAACGGCAACGGCAACGGTAACGGGTCCGGCAGCGGCGGCGGCACCCCCGGCCCC
GAGTACTACACGGGCGGCACCCCCGCCGCCTGGGGGTACAACCCGCACTGGCACCAGCCG
GCCGCCTCACAGGGACCGCAGCAACAAGTGTCAATAAACCCAGCGACGGGTCAACTGGAT
TATTCACAACAATGGATCGACTACTACCGCTCTGTGGGCCTTGTCCGGGAGGCCGAAGCC
ATTGAACAGGCTAAAATGCAGCAGCAGCAGCAGCAACAACAACAACAGCAGCAGCAACAA
CAGCAACAACAACAACAACAGCATCAGCAACAAGAAGAAGCGAGTAATCAGTCATTGGGC
GGTAACGACAGCGGCGGTCCCTCCACCCCGCAGCCCACGCAGGACTACAGCGTGCAGTGG
GCGGAGTACTACCGCAGCATCGGGAAGGTCAAGGAGGCTGAGGCCATAGAGGCACAGATC
AAAATTAAGCAGCAGCAAAACCAACAGCCGCAGCAGATGTCGCAGGCGGAGCTCCCGGGC
GAGGAGTCCACGCCGCCCGGGCCCGCGGCGCAGTACGCGCAGTACTCCATGTACCAGGGC
GCCATGTACCCCGGCTACTCCGCCTACGGGTACCCGGCCGGCTCCGACCACCAGCAGTGA
ACTCAAAATGAACGGGTCGAGCGCGGGCTGTCACGACGCGACACGTCTTGTAGATTTAAT
AATTAAAAAAAAAATTATAAATAAGTAAAAACGTTTCTACATTTCTTCACAGTGCGAGCT
ATAGATGAGACATCCACAATAAATAAATAAATTAATTAACAATTTAAAAGAAAATACGTC
TCTGTACGCGTAAAAACAATGCTAAGAGAAAATAATTAACGAACAACGTTTCATAGTTTT
AGTAATAAATTCAATTAACATAAGTAACGAATTGTTGATTCACAATTTAATCTGACCTCG
TAAGTTCTCGTAAGACCTCTAGTTTCTCACAAATTCACTTGTTTGAGACAGCATTTTATT
TCTTGTGGATCCTACTTCATTTACTTTATCAATACACTGTTTAAAGTATATAATCTTTAT
GACTGACAATTATCAAATTTATATTTCAAACGTGGCTGTGTGGTCTATTATTATATATGT
TTTTTTTTTACTCTTTATAACAACAACTGTACTACTTTTGTATTGTTTAAAAAAAAATGT
GTGTAAACTTTTTTTGATTTTCCGTGCCAATATTCATGTATGTTGTGCCAGTCTGTCCAG
GTTAAAAATATAGCCACACTGCCTTTAAAAGTCAAAAAATGCAACGGCGTACCACCCGGG
CTTGAGAGAGAGAGAGAGACACTGAATGAAAGCGTAATGAGAGCGAGACATACTTCGCCG
AGGAGCCGAGGTAAATGTATTGAGTGACTTAGCACATTACACGATTGTCGTTAGGACGCG
TTAACGTTTTAGTGGATTTACGCCACTCTGAATGTTTTTTATATTTATCGAAACTATGAT
ATCAGTGCGAGGGAGGAAACTCTCGGAATGTGCGTAACGAACTCGTATCTAGTTTTTAAG
TTAGCGACTAGTTTTATAAAGTTTACGCGACATCTCTCTTGACTCAGCTCCTTTAGGTAG
TAATCGACCGCAGTTTTTAAAAACACAATATGTATTTGAAAATTTAAATCTTGTTACAAA
TAAAATTATAATGTAATTTTTTTAGTGTATAGACAAACAAGAGGTAATGTAAATCGATCT
ACATTCCTATAAAAAAAAATTGTTCAATTATGGGTAAATAAAAGAAAACTTATCTTCGCA
AGTTTCCGCTCGAGGTTTGAAGGGCGTCGATCCCGAGTCTTGTATTATTTTTTAAGATAT
AAAGTGTATGTTGATTGACTTGTGTGTTCATTTATTTTAACGTATTTTTCTCTCCGCAGT
CCCGCAGGTAAGTGACCCTAAAACCGAAGGTCTGATTTATGCCATGATGTGTTTTGTTAA
A
(3601 bp)

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