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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40417_c1_seq2
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		PREDICTED:_ankyrin_repeat_and_zinc_finger_domain-containing_protein_1-like_isoform_X4_[Bombyx_mori]
Ontology
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0016020 C membrane
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0036266 C Cdc48p-Npl4p-Vms1p AAA ATPase complex
GO:0046872 F metal ion binding
GO:0071630 P nuclear protein quality control by the ubiquitin-proteasome system
GO:0072671 P mitochondria-associated ubiquitin-dependent protein catabolic process
Transcript
Level		FPKM:1.71 TPM:1.35
ORF EntryO_BomoMG18049_3prime_partial:A_BomoMG_comp40417_c1_seq2
Sequence
(Nucleotide)
CGTGAAGTGACTTAATTGACTTATTGCAAAATTTTTAATCTCGTTGCACAATATTATCGA
GTGGTAAAGCAACCAAGACAATTATTAAAGTATTATATTGTGTATCACTTAAGTAATAAC
ATGTAAAACGTGGACATTATATTTCAAGATCAACAATCTGAGCCGATAATGGCGCTGAAG
CCCGAGGCAGTAAAAACTAAAATCGTGAAAGTCTATGAGATCGACGAATTTCAAAAACTC
CTAAAAGGTGTTCATGTGGCAGCATGTATGATAACAGAATCACATAATGTCATTGATGAA
CAGAGTGTCTTGCGTCGCCTTAATGCTTTAACCTTAAATGGTGCTTCTGATGGTAATTGT
TGTTCGTGTTGCGGAGTGGGTCCATTCGAGACCCGTGCGCAGCAAACGGCTCATTATAAG
CATCACTGGCACACTTTTAACTTGAAGAGGAAACTATTTGGAAAATCTCCATTATCCATT
GGCCAGTATAATTCTCGGAAAGATGAATCAAGCAGTGAGTCTGAGGAAGAAGTGGAGGAC
AGTAAGAGACCTCCGAGTGACCTATTTGCTGCAGCAACAAGACATTGCAAGGCGTTCTTC
ACTAATCATTATGGGCAGGTCTTCTGTATTTATAGATGTATCCTACATCATAAGAAGGAA
GAATTATCAACGGATGGTGATGGCAGTGCCTGGGTAGAACGTGTGGAGCAGCTATTGATC
CCAGGCTATCAAAGATGGGCAGTCCTGATGGTCTCGGGTGGCAGATTTGCTGGGGCAGTT
TTCAGTGGTGGCACTATAGTTCTACACAAGACATTTCATTCATATGTCACAAGGAGAGGG
CAAGGTCAAGCCCAGGCTACAAGAGATGCTCATCATGGACACGCGAGGTCTGCCGGTGCT
AGCCTTAGAAGATATAATCAGGCGCAGTTTCTAGAGCATATCCAAGATATTATAAGTCAA
TGGACAGAAGACTTCAAAGGTTGTTCTCTAATATTATATCGGGCTGTAGGATCTTTAAAT
CAAGCTGCTATATTTGGAAAGAACTCCCCTATAAAGAAAGATGATCCAAGACTTAGAGTG
CTACCTTTCCCTACTAGAAAACCTACATTTAAAGAAGTTCAGCGGGTTCATTCTACACTT
GCTAGTCTAGAGGTTTACGATTCGTTGGAGTTGTTCCAAAAAGCACTGATAACATCGACA
GCTAAACCAGCAAATAAAGCTACACTGGATCTTGGTAATGAAAATATTAAGAAAACAGCA
AAGAAAAGTCCTAGTAAAACTATTGATAGAGCAAAATCAAGAGAACGCACTCCTAGAGAG
CTACCAACCCAGTTGATGTCGAGCGAAGACGAAGGTCCCTGCTTCATAGACTCTGAGACA
CCTGTAGGTTGGATCAAAACACTATCGGAACAAAAAACCAGTGGGATTATTATTAATTCT
AAAAAAGTTGTCCTAAACGATTGTGCTATTCAAGATAGGTCAACACCTAGTCCCTGCGAG
AGCGAGAAGGAAGATTTAAAGCAGGAAGTAAAAGAGAAATATGAAACTGATAGGAGGAAA
AAGATAAAAGATCCCGCTGTTCTTAACAAGCCCAGTCAAAAGATTCCTAATCCTATTAAG
AAGGTACTTTTGAAATGCATTTATAAATTCCTTCAA
(1656 bp)

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