SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40415_c0_seq2
Scaffold_idBomo_Scaf496
NCBI non-redundant
(nr)		PREDICTED:_transcription_elongation_regulator_1_isoform_X3_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001103 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001106 F transcription corepressor activity
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0015629 C actin cytoskeleton
GO:0044822 F RNA binding
GO:0070064 F proline-rich region binding
Transcript
Level		FPKM:3.24 TPM:2.56
ORF EntryO_BomoMG18037_3prime_partial:A_BomoMG_comp40415_c0_seq2
Sequence
(Nucleotide)
GCGCCATGTTTTGACTTTTAATTTTCATGCGCTCGCGGAACTTAATTCTAGTGCGTATTA
CTTCAAGTGATAAACTGTTTTAGGCATGTGGACATAGTATTCAGTGAAAAACGATAAATA
GCTCACATAATGGAAGATGGTTATATGGAACAGCAGGACGTGTCGTTGAACGAAGTTAGC
CGAAGCGACGCCCCGAAGCAGAGGCTGGGAAGGACTTCGCCGAATACACTGGTTATGAAG
AAGGTTACGAAGAGGAAGACGGCGGTAACAACTTTCGCGGTAATCGGGGCCGTGGGAGCT
TCAGCCGTGGTCGCGGCCCCCCGCCTGGTTGGATGAACGGTCCGCCGCCGCCTATGCGAT
TTCGTGGACGCGGCTACGGACCCACAGGACCTCCAATGCGCGGACGAGGCTTCTTCAGAG
GACGGGGCGGACCCCGTTTCGGACCCAATGGACCGAATTTCGACAACAATTGGGGACCGA
TGGGTCCCCCGCCTCCCAACATGATGTGTCCGCCGCCCTTCGGCCCCCCTCCCGGCATGA
TGCCTCCCGGGGGGCCGATGGGTCCCCCTCCTAATATGATGAATCAGCCCCCATATGGAG
GACCACCTGGTATGCCGCCCCCTGGTATGAACCCTGAAGTATGGGTGGAAACGAAGACAG
ATGAAGGCAAATCATACTATTACCATGCTCGGTCCCGGGAAACTACATGGACCAGGCCAG
TGGAGGGACCGAACTGCAAGGTCATCACACACGGACAAATCCCCCAAATATCGGCACAAG
GGGTCGGCATGAACGGTCCCATGGGCCAGGCGCCGCTCGTGATGCCCAACGGCATGATGC
TGCCCGGCGCGCAGCACCAGTACATGGGGCCGCCGCCCTGGGGGAAGGACGATAAAGACA
AAGCCTCTGAGTCTGTAGTGAGCAGTATGACTGATAACGATGAAATGCCACCGGGAGAAG
CAGTCCCTGGACAGCAGCAAACCAATGGTTACAACGCATACCAGCAGGGAGAGTCATACG
GGCCCCCGGGCTGGCCGGCCTGGGGCTGGCCTCCCGCCGTGAACAACCCCAGCAACCCCG
AAGCGGCCCCGGGCGCGTGGCCTAGCAGCGGCGCCGCGCCGCAGTGCGAGCCCGCAGAGC
AGCCCCGGGCGCCGCCCACCGTGCCCATGCCCAAGAAGGAAACCGTGATCTCGCCCAAGC
TGCTGGAGCTGGCGGCGGAGTGGACGAGCCACAAGGCGCCGGACGGCCGCCCCTACTACT
ACAACGCCAGCAAGCAGGAGAGCGTCTGGGAGAAGCCCGCAGTGCTCAAGGAACTCGACG
ATATAAAATCCTTGATAGCCGCCGAGAAGGGCGAGAAATATCCTAATATAGAAATAGATC
CCAGCAAAATAGTGGTCATCGACGTTGAAGAGGACGAGGAACCGCAGAGCAACACCGATG
CGGAGAAGGAAGCCGCCGCCGCCGAGAAGGAGAAGCAGAAAGAGGAGAAGGAAAAGGCGG
AGAAGGAGCGACTCGAGAAGGAAAAGGCGGACAAGGAGAAGACCGAGAAGGAAGCTGCCG
AGAAGGAGAAGGCGAAGCACGGCAGGAGACCCATCTCTACCACGCCCATCGTAGGAACGC
CTTGGTGCGTCGTGTGGACGGACGACGGGCGCGTGTTCTTCCACAACCCCACCGAGCTCA
CGTCCGTGTGGGACCGCCCCGAGCTGCTCATCGGCCGCCCCGACGTGGACCGCGCCGTCA
CCAACCCGCCCGCCGCCGTGCTCGACCTGCTGCGCATCACGTCCACCGTGGGCGGCAAGG
AGTCGGAGCCCGGCGTGTCCAGCACCACGCCCTCCGTCACCAGCACCGCCGACACCAAGC
GCCCGGCCGACGCCGACGCGGACGCCGCCGCCGC
(1894 bp)

- SilkBase 1999-2023 -