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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40408_c1_seq1
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		putative_nuclear_export_factor_CRM1_[Danaus_plexippus]
Ontology
GO:0000055 P ribosomal large subunit export from nucleus
GO:0000056 P ribosomal small subunit export from nucleus
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000776 C kinetochore
GO:0003723 F RNA binding
GO:0005215 F transporter activity
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005642 C annulate lamellae
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006611 P protein export from nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0007062 P sister chromatid cohesion
GO:0008536 F small GTPase binding
GO:0008565 F obsolete protein transporter activity
GO:0010824 P regulation of centrosome duplication
GO:0015030 C Cajal body
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0019904 F protein domain specific binding
GO:0030529 C ribonucleoprotein complex
GO:0031965 C nuclear membrane
GO:0034504 P protein localization to nucleus
GO:0042176 P regulation of protein catabolic process
GO:0042493 P response to xenobiotic stimulus
GO:0043231 C intracellular membrane-bounded organelle
GO:0043488 P regulation of mRNA stability
GO:0046825 P regulation of protein export from nucleus
GO:0051028 P mRNA transport
GO:0075733 P intracellular transport of virus
Transcript
Level		FPKM:9.08 TPM:7.17
ORF EntryO_BomoMG17976_3prime_partial:A_BomoMG_comp40408_c1_seq1
Sequence
(Nucleotide)
ACGGTTTTTAAAAATTTCCAATGTGCACGAAGAAAGCGTGGGTATTGTCCTACGACATAC
ATTATGTTACTAGCAATTATAGCTTTGTTATCTTTTCCCTTTTTCTGTTCACAGAGACCT
AGAAGCTCTTTAATCACAATAACCAAAAATCTCTTTTCATCATCCTCAGATAGAGCTCCA
GAAATAGATCCAATTGCCCAACATAATGTGTTCAAGTTCTTCCATGACCACTCAGTACCA
TTTACTTGATTTTGTAATTTCTCTGTCATAATACGTTCAGTATCTAAATAGTCTAAATGT
GTCAAGTAAACTAATGTTTCTCTCATATTTTTATACAAATTAATGGAGTCTGTGTCCTTC
ATAAATTCTCTCACAACTTCACCATTTTCATTTTCAACAACTAACACCTCTTCTGGTTTT
GCCATTCTCGAGATCATAATATACCGAACACTGCTCAAGACATCAGCATACAAAGCTTTT
CGGCCTCCACTTTTACCCAAATGGTACAAGTTTGACGAACATGGCGCAATTTTGTACAAA
TCAGCAGCAAGAGCATTCCAATATTCAAGACAAATTTTGAAAATTTCTACATCTTCTACC
TCTGATATTAAGACAAGATACCTCAAACCATTCATTAAAGTGTTTGTTAATCCACTCTTT
TCTATGAGCGGACCATGCTCTTTTAGATATGTGCATAAGAAAAGTGCAAGATTTTGAATA
AAAACTTGTTCCTGATCTCGACCAGCTACATATGCTTCACGTATGTTTGTAGTTAGAGGA
AGCATAACTTCAAGTTGTTCCATAGTTTGTACAAACAAATAAACAAACTGCTGATCATAA
TTGCTGACTGTGACACCGGCAATTTCAGTAAGACAGCTCAATGTTACATTCCTAAACATC
GGCACGTTCAGAAACTTAAATATCAATGTGCTTATCAATTTCATTTCGAAAATATAACCA
AGTGGAATCCAATTTAAAAATCTCAAAAGAGTGTCTAAGGTCACTCCAACTAAAGGTGCA
TTTTGTGAATTTTCCAAGACAAATTGGCATAGCTGAAAGATTTGACTGAATTCTGAACAC
ATTGTATCTTTTAGATGCTTAGCTTTTGTTTGTGTGAGCTGGCCTGTACTAAACATAAAT
ACTTCTTCACTCAACAACTTGAATATTTCCATATTGTTTTGACAGAGACTTTCATTCGTC
TTTGAGGCACCCACAATGTCACTGATAAAAGTTTCCCAATTATGGGGCCATTCTCTTTTC
AGAACTTGAATAAGGATCATGTTTAGTTTTTTCAAATAAACTTTGTTGCTTTCCATCGTA
ACAGGATCTGATGAATTTTTAATGATAAGGCCAACTATATATTTTTTTATACCCTCACAC
TGATTTCTTGGTAATATTTTCCATCTCGTTAGTATTACTTGTTCTAATATTTGTAATGCA
TAATATTTAGTTTCTTGATTTTGAGAATATTCAAGTATTGTATCAACACGAGTCCAAGCA
TCAGGATGTTCCTTCAAAGCAGTCAGTATATCCTGAGCAACACGTTGTTGATCCCCAACA
GCAGAATATAAACAGCCAACAATGTTGTCCAATAAATTGATGTCCAATTTTTGATTGAAA
TCCAAAAGTTTAGATGCCTGTTGTTCTAAGGTTGCCATTCTGGTAAAATATATTTATTTA
GTTAATTTGTTCCCTTTTTTCCAAAATCAAAATTATTTTGATTAATCCACATTCATTCCT
CACCTTATACAACACCGAGAAAATAATTTGCGGCGCAATCAATCTAACGCACTACCAT
(1798 bp)

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