SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40405_c2_seq2
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_zinc_finger_protein_Gfi-1b_isoform_X2_[Bombyx_mori]
Ontology
GO:0001085 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0016363 C nuclear matrix
GO:0016568 P chromatin organization
GO:0030097 P hemopoiesis
GO:0046872 F metal ion binding
GO:0051569 P regulation of histone H3-K4 methylation
Transcript
Level		FPKM:8.11 TPM:6.41
ORF EntryO_BomoMG17961_5prime_partial:A_BomoMG_comp40405_c2_seq2
Sequence
(Nucleotide)
GTCTCACGCCGTGTGTGATCACGTGCTCGTCAAGGAGAAGCTGATATAGCCGCTCAAGGC
AAACAGCATAGGTAGAGAAAAAAAAAGTAGAGGTAAAGCCATTCTTTACCTTCTAAATGA
TAACACGTACCTACGATGACACGAGAGCATTATAATTGTTACAGTCTTATACCAAAAATC
GTTTTTGTTAAGCACAAAAACTTTACACCTATTTAATTCAACTAATCATACATTAAAGTT
TTACAAACTCGATGCAACAGCGTATTTACAAAGTGGGCACCATTAAAAAAGATCGTGTAT
ATATTCTTACATTATTTCTAACCAACTTTTTTCATTATCTAGTTGTTCTTTGCATGTCAA
TGTATGGATTTTGGTATGCAAGAACTATTAAAAAAAACAATCCTCATAATGCGATTTATC
TTATATCAAATACCCTAGCAAAGTTATTTCATATTAGACGTCAATCGGATATCGATAAAA
AAATATTTGAAGATTAACAAAGTTTTATAGGTTGTTTTTTAATTAAGACGATCATCTGAT
TACTGCTGAAATTTTAATGGTTAGTAAATTAAACATTTGGGATATGTGAGGAGGGGGCGT
TCTAAAAAGACTTGGATGGAATGTGTGGAAGAGGATATGTGAGAGAAGAGTTCGACTGGC
AGAGATGACGTATATAGATGAGATACGTATAGGCCTGAATGGAGAAAGAGGACATGCAGT
GCTGACCAATCATAGAGGGATAAGAACAAGAAAAGAAAAAGAAGAAAATATTAAACATCT
CAATATAACAGTTTTTTTTAACAGCACTGATAACGTATGATGTCATACGAGGCTAATCAA
TGAGCTGTGGTGATGACCGTCACTTATTTTGACCACAAATGACGTCACTTGTAAAATAAA
AGCCGTTTATTTTTTTGTATTTTTCAAGTTCCTTGAATCGGTACGATTTAAGTGCAATAA
GTTATAATAACAGAAATTCTCCTCAAAGGACTAAGAACTAATATTATTAATAATTTTGGT
ACAGTACCTACTGTTTGTTTTCTTTTCGTTATCTAGAATAAAACTGTTGTCAGTTACATT
GACTCTGTCCAATAATTAGCGCGCAAGAAGATTACATAAGCTATTAGAAGTACTATTGAT
CGTATATCCTGGAACATCATTTCCAGAATTAAACAATTTTCTTCTTTGGATTTATTTGGG
ATACAGTGATTAATTATATCTTTGGTGATTTTGCCTTAACGCCAGTTGGGCGGAAAGGCG
GTTGTAGTTCAGGACGGCAACGGCTGGAGTGGTGGTACTGCGGTGGTCATGTGTGGCGGC
GCTCCGAAGTCGGGGTGCGGAGGCCGCAACTCGGGATGAGGGCGGATATCTATTCTATGG
TCAGGTATTTGCATATCTGAGTGCATGGAGTGAACATCTGTATGCGAAGGCTGCATAGGC
TGGGTCGCCCTCAAATTGGCATGCTGCGTCTCTTTATGCCGGCGAAGGTCGACCTTTCGT
TGAAAAGCGCGCCCGCAAAGCTCGCAAGCGAACGGCTTGAAGCCGGTGTGCTTGCGGGAA
TGTGTGATCAGATTCGAGCTTTGACTGAAAGCTTTGCCGCAGACCTGGCACTTGTGGGGC
TTTTCACCGGTGTGTATGTATGTGTGTTTCTTCATATCAG
(1660 bp)

- SilkBase 1999-2023 -