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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40399_c0_seq2
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_protein_split_ends_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007379 P segment specification
GO:0007400 P neuroblast fate determination
GO:0007403 P glial cell fate determination
GO:0007411 P axon guidance
GO:0007422 P peripheral nervous system development
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0016055 P Wnt signaling pathway
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0035222 P wing disc pattern formation
GO:0035321 P maintenance of imaginal disc-derived wing hair orientation
GO:0048106 P establishment of thoracic bristle planar orientation
GO:0048749 P compound eye development
GO:0050832 P defense response to fungus
Transcript
Level		FPKM:3.11 TPM:2.46
ORF EntryO_BomoMG17941_3prime_partial:A_BomoMG_comp40399_c0_seq2
Sequence
(Nucleotide)
TGTACACCAAGTTAGTAAAACTGATTTCACTGCCCAAGAGTGTTCGACTTTTGGTAAGAC
TGAGGAAAATGATACTACGTTTATAAATATTGACTTGAAAAATAGCGAAAAAGATGAAAT
AAAACGCCGAAGAGATAAAAAGCGTAACAGGGAAAAACACATAGTAAAGGAAGACGAAAA
TAGCTTAGATGTTGATGCAGTTAGCAAAGCTATAGAGGCTCGGCTGTTTGCGGATTCTAC
AGCAGACGAAGAGAATCGTGCAAAGCCTGAGAAGTATCATGGAATTCATAATGATAGTGT
TGATGAAACGACCTCCCCCTATAAAGATATATCAGAAAGACATGAAAAAAATAAAAGAGA
TTACAGGGACAAGAAAAAGAAAAAAAAACGATACAAGGATGAACGAACAAGTCGTAGAGA
TGTGTTCCTTTCTCATGAAACTAAAAACGATAAACTGGAGAAGTCTGATGTTATTGAAGT
AGGTACTGCAGACTTACCATCAAAAACTAAAACAATAGAGGAGACATTACCGACCGAAGT
TTCTAGTAATAAATTTGAAAATAATTCACCGACAGAATCACAGAGTCTACCTTTGTTAAC
TGATAGCCCACCCAATATTTTAAAAGCAGATATCGGAGAGGCTAAATCCAACAATTCCAA
TATCGATGACAACAAGACTGAAGTTAAAGATTTAGAAGAAATGGTATGCGTCGGTGAAGT
CAACACAGAGGTAACGGTCACAGAAGAAAACTTTAAGAATACCGTTGAAGACATTTCTTT
AGTGCACGAACAGAATGTATCGAGTCCACCAGATGCTAAGAAAGATATTTTTCAAACAAC
CTATAATTCTGACGCAAGTGACGCTGTGCGCAGCATTTCAAATTTAGAAAACGAAACAGA
AAAGGCGTCTGAAATCTGTACTGATCTTAATGATCGCCTCTGTCAAAAGGTTGATGAAAA
GCCAAGAGCAATAATATCTCAAGAGGAAACCGAAGACGCTGTGGCTGCTTTGTTAGGTGA
AAGTTTTGGTGGAAAAGAAGATTCTTTCACAGACTGTTATGAAGCAACCGAAAACGTAAC
GATACAAAAAAATGAGATCGGCCCTGAAATTATTGTCAGCGAAAGCATCCCCGAAGAGGA
TGCCGAAGAAATGAGACAAGCAGTTCAGAATTTGAATGCAAGTGAATTAGAATCAAAGCC
AGATACCCCAGTTTCTGATAACGATTTATTACTAATTGATACAGATAATGAAGAAGTTGA
AGATTCTACGCAAGACGCAATAGAAAGACTGCCAGTCAATATCATTGCCACAAGTCAAGC
TTTGAATGTCACAGTCGAGCAGTTGAAGCAGGACGAAGTATCCAAGACCACAATAACTAG
CAAAATTGAATCAGTTAGCGAAATAAAAAATGATCCCAAAAAAAGTGTAACTGTAAAGAT
AAGTGAATCTGATTTAAAGGTACCAATTCCTAAAAAGGATTGCACTCAGGTAATGACATC
TACAGCAACACCAGTTATCACATCTTGGGCCCTAAGTAATAATAAATTGATTGAGTCGCC
GGTCATTAACATAAAAACCAATCCTTTGATTAATAGAGAAAAAACTGAAAGCAAACCAAC
ACATATTACAGCTAATATAGTGCAAATTAAAGCTTCTTCATCACAAAATATACAAGTGAC
TAATTCTCTCAGACCTATTATTACTCCAGCTAGAATTGGCGCACCGTATCAAGTCATCAA
TCAAATAATCAGACCTCAAGTTTCAAATATACAGCCTCCTACCATTAAAATTCCGGAATC
TCATATACTGTATCAAAAACCGCAAGGGATAGTAATATCACCGAGAATGTCATGTGATTC
TCTTGTGCAAAATACAAAAAATAGTCAACAAGCTGAGAATGCACCTACTCCACGGATAGC
CAACATGGCAATTTTAAGTACTACACCTACTTTGAATTCTGCTGGTATAACTACTACGTG
TGCTTTACAGCAACGGTCACCTGGACAGGTAACTGTAGTAAGGATGCAACAACCGCCGTT
AAGTCCGATACAGACCATGCATATACAGCATGGACCGCGAGCAATTGTGTCGCCCAACAG
ACATAATTCTGTGTTAGTACAAGCTCCTGGACCTAATATGCCTTTTAATAGGCAGACTAC
ACCAATACACGTTACACCGGTTTTGACTCCAATTAATAAGCAGGTCAATGTAAACAATTT
GATCCAACATAACAAAGGCTTAGGAGTGAGTTCCCCACTGTTGAATTCGATTAAAACTAT
GCCCGGAGAATGCAAGAAACTCGAACAAAATGCAACAGAAAGCATAAAAGAAAGTCCAAA
AATAATATTATCGCCTAATAATCTACAACATAACTCAAACCCTACCATAATGGCTCAGAA
TCGCTTAATTTCAATGCAAAATTCTATGCATATGGGAAATTTAAATACTACACTACATTT
AAACAACAAAGTTTTAATTAATACAATTAGTCAACTACACGAAAAACGAGAAAATCAAAG
TGCAAGTCCGGAACAACTCGGTCATATATCATTTGGGGGCACGCCCATAATTCACGTTGC
GGGTGTTAGTCATTCAACAGCGTCTATTATTCAAAGTAATGTAAAACCTGTGATGTGTAG
TATTCAAGACTCCAGCGCAATGAATCGTGGGCCAGGGTCAAACGTCATACATGCAGTGAG
TTCTCAAAGATTAATGACACCTCTGCCTTTGAGTAACGTTAGACAACTAGAAGCAAACAA
AGGGCCATCAGTCTTGTCTATGGCTTCCGTTAAATCTCCTACAGTTCTAACTAAAGTTGA
TTCATCATCATCATCAAATACTTTTACCAAGATTTCACCCATCTTAATAAAGGCAACTTC
GCCAGAGTCTTTACATTCAGAAATAAAAATAGAAAATAATGATGACATTTCTAAACCAAG
TGATAACAAAAAAAGTAATGAAAACAAAATAGAACAATCAGAATTATTACAAAATGATTG
CTTTGCCAAAGCTATCAATGAAGTAGTTGGTATTACTGAAAGCAAATGTGGGACTGATTT
TGAAGAATTGTTGAAAGATAACACTAATGAAATCAAAGTCATGAATGATCCAGAAAAAAA
ACTTGAAATTAATGTTGGGAAGACGATTACTGTTCTTTCGACAAGCTTAAGTAGTGCTGA
CAAATTGAGGACCGAGAACAACGAAAATGTGGATTTGACACTCAATTGTGCAGAGAATGA
AGAAAAACCGACAGTTGAATATTCACTGCAAAAACTTATCAAAGACAAAATAGTGCCAGA
TGTTGATAATGTTTTTTCTCCTCGTAATGAAACTAATCCTACACAATTTGTACCCGAGGA
AACAGACAATACCGAACGTGAGTGTAAATCAGATATTTCAAGCTTCCAAAATATTAACAC
TAATAAAGACATGAAATCCGAAAAAATTGAGAGTCATGCTTTTCAAACCCAAGAACTGCC
TGGTATAGAAGATGACAATGAAATTAAAACTCCTGATGAAATTGATTCCTGGAGTGCTAA
AGACGTCAACATAGAGTCCGTAATTAAGAAGGTCGACTCATTGTGCAAAGAAAATAATGA
AAATGAAGTGAAAGTTGATACTTTGATAAAAAATGAAAATACTGTTCAATGTGACGGAAA
GGCTGAATTAGAAGAAAATCTATCGGATTCGTCATTCCAAAAGATGACAACAGAGACTCC
AAATAAGCTGACCTTATCTGAAAACTCTCACGAATCACTCGTAGATAAGAGCCCTTCAAG
CAACAGAAGAGGAGGGAGGAGCCTCAGAGGCAAGAGATCAGATAAAAAGCAAGACCGAGT
TCAAAACCGAAATATTACAAAACCAATGAGAGGAGTGACCACAAAACGAGGGCGCGGCAG
GGGGAAGTTGATAAAAATATAAAGGATTTAGTGAAGAATAGTACTTGTTCTATGCCGGGC
GATGTATATGATTTCCATGAGGATTCAGGTGATGAGTCAGCGACTGCACCTGCTAAAGTA
GAAAGTAGACCTAGATTGATTTTAACAATTAAAAGTCCTTTATCCGGTCATTGTAATATG
ATAGCCACGTCTACATTAAGCATTTCTCAGAAAGATCAATCTAAATGTGCGGAAAAAACA
AACAAAGAAGAAAAACTTGAAGATTTTATATCACCATCGCTTAATACGCGTAAATCTAGA
AGACTCCAAGAGAAGGACGTTCAACGAGGGACTGCAGATGATATTGATGACATCTTAAAA
ACTGACAACATTCAAACTAAAAACAGTAAAAAACGATCAACGAGGCAAAACGCCGTGAAA
GTGAATTTAGATAAAAATAGCAATTCGGACGTCAGGAAATCCCCGCGTGGAACAAAGCGA
GTGAGGGACAGAAGTTTATCGGACGCGTCAATCGAAAGTGGTGATGAAAAGCATAATAGG
AAAGAAGATCATTCATCTGATGCGAAGATACCGCGTTCACAAGGCATTAACTCTGCAGAC
GAGGTTGCTCAACGTCAAATTTTAAATTTGGAACAAAACACTGCAATTCCGTCAACTGTC
GGCTGTTCTGTGTCTACGCCGAAATTGGCGCTCGCCACCGTCACAACCGTACCGCCAACC
ACTCTACCGGTGATCTCTGCAGCTGCACCAAAGTCCGGATCGAATGTCGCTACAGTTCAT
CCAACGGTTCCAACACCAATCACCAAACCTCCCAAAAAAATGATATCGGAGAGGAGCGCA
AAGCTCGCGATTGTCTTTGAAACCCAACAAGAAACGGAACGGGGCGGTGAAGTACAAGGA
GCGCGCGTGCCAGCAGTGCTGGTGCCCATTGGCGGCACGGAGGCCACGGGCGAGGTGCGT
GTGCAGTCGCCGGCCCTCCCGCATCGCGGTCCCGATCCACCCGCACCCGCCCCCTTACGT
CCTGCCGACCGCGCCACGCCAGTTCTTATCAGTACACACAGAAGCAGCGAGAGCGGGCAC
CGTGCGTACATGCCGACGGCCACCGCTAGTCTGCCGCGCGGCGCGCACCATCCGCCTCCC
GACCCACCGCTGCTGCACAAGCAGCTCGCCGTTGTTAACCCACACCATCACACCGGTGCG
GGCTCAAGAGTCACAATTACAAGTGTTCCTTCAATCAGTCCTCAGGGTCAGATAGGAATG
GGCGAATCAATGTACCCACACTACTCT
(5187 bp)

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