SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40397_c0_seq4
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_7-like_isoform_X1_[Bombyx_mori]
Ontology
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007275 P multicellular organism development
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010216 P maintenance of DNA methylation
GO:0016579 P protein deubiquitination
GO:0016605 C PML body
GO:0016787 F hydrolase activity
GO:0031647 P regulation of protein stability
GO:0036459 F thiol-dependent deubiquitinase
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0051090 P regulation of DNA-binding transcription factor activity
Transcript
Level		FPKM:5.50 TPM:4.34
ORF EntryO_BomoMG17936_complete:A_BomoMG_comp40397_c0_seq4
Sequence
(Nucleotide)
GCTGTGAGCTCGTCCACCCGTCTATGCAATCAAAAATAAAAAGTGTTTCACAAAATTACA
GCGCGTACTCGTTTCAGCCGCGTTCATAATGATCCTGGTCGCTTTACAAGTGAATATGGG
CGGTGCCGTGTCCCGGGCTGTGAGCGGAGTAGGTGCGGCGTTACGGCGGGGAGACGCGGC
GCGCGGCGACCGGCTCAGTTGTATATTTTGATGGCCTTCTCCAAGTAGTTGACGCGGGAT
CGCTTCGGCGTCTTGTTGATGTGCTCGAGCCCGAACCAGGGCCGCGCCGTTGCGTCTGGG
TGCGACAGATTCGTATTACTACTTAGTCTGAAATCGTTGATATTCACTGTCGCTCCTTCG
CTTATGTAATTAGGTCTGCCGTTTGTCACTACAGCAAAGTTGTACTTTTCCCATTCTTTG
TCGGGTATGTCGAGTTTCTTCTGTAGGCGATCTTTGACAGCTTCGAACGGTTCGTTGTGT
TTGAAACGCGCGTAAAACGGAATTCCGAACGTCGCGTATACTTGCTTGTAGAAATGCGCA
CACGGAACCAGCATCTCATCCTCTTGTAAATTCAGTTCGTCTCTAGGTATCTCCTCTATT
CTGTAGAGTCTGGGCGGCGATATGGTGACCTGGTCGAGTGTGAGCTCGGGGTCCGGACCC
GGTAGCACTTTGTGACACGACACCTCCACGATCCTTAGCCTGCCTGAGCCCTCGGTTGAC
ATCTCGACTACTTTAGCTGCCTCTTCTAAAATGTCCGACACTTTACCACCTTTATTTGGA
TACAAAATTAATTCTTTATCCTCTTTGTAATTTGGACCAACCCATAGACATTTGAATTGC
TTCTTGTTGTCCAATTCGTTTACTTTAATAGATAATATCTGATAGAATAATTTCTTAGGG
CATTTTGGTTTGCAGTACACTAATAAGTCCTTAAGTATTCCGTCGTATGAGTATCTCAAA
GGTAGTCCTGGGGTGTCCTTGTAGTTTTGACACTTAAAGAACTGTATTAAGTAAGGGTCC
ACGTTGAGCCTCTGGCCGACCGCCCGCGCCATCTGATCATAACGCATTTGCATCGATAGC
TCCATTGTGAATCCCGGATCATTGGGCACCGTTTTATCGACGAACTGCACCTCGACCTTG
TAGAAGATGTACTTGAAGTAGTCCTGGCAGGTGGGCAGCTCCAGCTCGTCGTGTCGGTTG
TCGGCACGTTCGAACACAATGATGTCGCCGTCCATCAGCTCGTCCAATACCTTTTCTAGA
GGTTCGTTGTAATTACTGATTTTTTCAACAAAGTCTGGTTTGATTTCTTCATACAGAACT
AGTGGAGTGTCTGGTGGGAATCCTGCACGTTGATTGAGTATAGGTAGAAGATCGGCAGGT
TTGCTTGCGATGGGCAAATAATGGTGTCCGCAGTAGTGTATGCGCTTCTGTTTAGGATCA
TAATACTTAAAAAACAGGACCACGTCGTTCTTCTTATCGAACCAAGGCAATGATGTGAGA
CCAGAATCTGGAGGCAGCATCTCGAGGAATATGTTCCATGGGTTCATGTTCTCAGAAACG
TCAGCTACAGTCTTGAGTTGATCGTTAAAAATGTCTAGGCAGGTCGGTCTGCATGTCTGA
TTAGAGCGTGCGCTAAATGGCCAGGGTCGGAGCTGCTGCAGTGGATACTTAAAGTTCTCT
GACAATATCTCCATGAGTTCAGAGACGGTGGCCTGCTTCCTGACGCGGAACACGCGGTAG
TGCGCGCGCTCCGGGTCGTACAGATCGTTCCCTTGATGACCGTCGAAAGCTTCCTCCAAT
ACTACATTCACGTTCATATACAGGTGGGCTTCGTTCCGCTCTTTGCGACGAATGGTTTCG
ATTCTCTTCTCTTCAGCTAATCTCTCACTCAACTCAGTAGGTATGTCTGCTTGTGTTACT
TCTTGTAGAACAGTCTTCAACTGTGAATCCCTGATATAAACCAACATATAGGCGTTAGTG
CAGTGGCGAACGGTCAACGTCATGTCCTCGTCGTGACCGCCGTAGTTGTATTCGATGGCC
TCCTGTTTCGTGCACCGGGACACCACGTCGTCGTCGAACTTACACCACTTTCCGTCACCT
TTCGGATTGATAAAGACCACATAATGCCCCCCGTGGTTGTCTCCCGAGTGAACTAATACC
GCATGGAGGGTGTAGTCAGCCGGTGTTTCTGGTTTCTCCTGTAGATATGCATCTAAATTG
ATACGTTCGTAGAATTCAAATCTGTCATTAAACTTGACCGAACTGTCGGTAATGGGATCG
TATTGGAATCTCATCAAGTGTAAATGTAACACGGGCGGGAACGTGGCAAATATGACGCCT
TTCTCGGCTTCCTGGAGACCGTGCTCGCCAGCGTCGTACTTATTCTCGCCGTCTAGCGTT
TCTGTGCTTATGTAATCTTTGAACGATTCGTAGATATTTTTCTTCCCTTTTATATTGAGT
TGGATATCGTAGAATGTTTCCACTCGGGTACTTGAAACGTTAACGTTCTTACACTTAATG
TATGATGTCATCTTGCCCTCGAACAGTCGAGGAACCGTGCCCTCCACGCATGTGCCCTTC
ATTTTACTTTCTAATTTATCCAATAAAACCCTAAGGAACTCTTGTACGTCGTGTTGCATG
AAAGAATCAAGGGTTTCCCAACCAAAGCTCTTGGTCAACTTCTTTGTACCAACTGGTTTA
TCACAGAACTGTAACTCGTAGAATACTCTTTGCAAAGCCAAAGCCACCGATCTAGTACTA
TCGTCCGATTCTGTAGGCATCTTGTACACAGCTTTGCGGAGTTGATTCGTGAAATAAAGT
GTTTGAAGTAACGAGTTCATATAACAAGTTGCACCTTGATTCTTCAGACCAACATATCCT
GTATGCTTCTTAGAATCCCAAGATACGCCGTGGGGTGCTTCGGCGGTGACGTGAACTTCC
AGAGTGATCGCGTCGTCTTTAATGTAGCCCTTCTCGGGGTCTAACACGTCGTTCCACGTC
ATGAAGTGAGAAAAGCCCCAGTCGTTTTCTTTGCTGTAAAATAAATGTTGAATTTTCCTT
AGGAAAGGTTCGGTGTCCGGCTTGTGGGATATGAGTCTCAGTTCCGCCATCGCATAACAA
GACCAGCTGGATGATTCACTTTCCCCGTTGCACTGTAGGAAGAAGCCCAGAGACTTTTGC
TGTTGCCGATCGGGCGAAGGCGCTTGCCGCGGCATAACCATTATCTTCCACGGCAGATTG
CGCACGTAGCACGGCGGCGACAGCATCGAGTCTTTCAAATTCTTAAAGTTGTGGACCGTG
AATCGGAACGTTGCCTCTGAACGCGCTTCGTCGTCTTCCATTTCAGCGTCAAGACAGGCG
AGGGGCATCTCAGCTGAGGCAGTCTCCTGTGTCTTCATAACATCAGCCATGACAACCTCA
CCATTAGGACCCTTCATCATTTCTTCATTCCAGGTTTTTTCAGTGGTAATTGTTTCAACG
TCCTGAGTCTCCATCTCCACGACCTGGTTAACATTGGAGTCGTGCTGCTGCCTGTCAGGT
GCAGGCGTGTGATTCATGTTAGCCGGGCGCGCCACGGGGGACTTTCGCCCAAAGCTCTTC
GATATTTCCTTTAAAGCCAAGGGATTACTCCCTTTACACTTGCCGAAAATTCGTTGAACG
AATTTCAACGAACCTTTCTCATCGACGCGATTACCCTGGGCGTTAGGGATTTTGTTTTTC
TTCGAAGGTTGGGAGTTAATTTTCAAAGAATGTTTACTAGCGGCGCGGCCGATGTCTGCA
AATTTCAATACAAGGGCCGACAACGAATGAGTACGCTAATAGCACATTCCTAATCCTACA
ATCTGCCAGAATCGCTTTGTCACTACGAAGGATGGTGGCAGGCGAATATATTATAATTTA
GCCGGGTACAGTCGTATAAACGCGAAAATAAACAAAATGGTGGATGTTAATTTAATTTCT
GACTTCGGATGTATGGCCCGGTTTGATCGACGAATGCACCATTTTATCATTCTTTCACAT
TTGCCCACATTCA
(4033 bp)

- SilkBase 1999-2023 -