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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40387_c1_seq1
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		PREDICTED:_SH3_domain-containing_kinase-binding_protein_1_isoform_X2_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005925 C focal adhesion
GO:0006897 P endocytosis
GO:0006915 P apoptotic process
GO:0007010 P cytoskeleton organization
GO:0008360 P regulation of cell shape
GO:0016020 C membrane
GO:0016477 P cell migration
GO:0017124 F SH3 domain binding
GO:0030054 C cell junction
GO:0030139 C endocytic vesicle
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0042981 P regulation of apoptotic process
GO:0043005 C neuron projection
GO:0045202 C synapse
Transcript
Level		FPKM:6.06 TPM:4.79
ORF EntryO_BomoMG17878_complete:A_BomoMG_comp40387_c1_seq1
Sequence
(Nucleotide)
GCGTTGCTGAGGTCCATGGGCGACAGTAACTACTCACCGCCAGGTGGTTATGCTCGTCTG
CTTACAATGGCAATAAATAAAAATCTACGCCTAGTTTCGATTTGTATTTTACGACAGAAA
ATTCCGTTCTACTATCAATTGCGCCGTTGTCGGAATACCTCAATCTTACAGGATTCAATT
TGAACGATACTTCAACTTCAGGATAACGCCACTCACTACACTTGCGTCACGCAGTGTGCA
AGTTTCTCTATTTCGGTCTGAAGAGCTTGTCGTTTCTCGGATTCAAGTTTCAATTTCGCG
TTCAGCTCCTCAATAGACGCCTTGAACATGCTGTTCTGTACTTCTATTAGTTTCTCGAGG
TTCGATATCCTGTAGTTGAGCTGCGCAATGAGCGCGTCGGTTCCATCAGCCGGGGGCGCC
TTCTCCCCCCTGCCGGGCTGCGGCCTCCGCTCGAGAGTACTGGACGCGCTGGTCCTGTCA
CCTCCGACTGCGGCCACCGGCTTCTCGGGCGACCTCTCCTCGATCCGTTCCACTCTCTCG
ACCGTACTAGACTTCTCGAACACACTGGATGTCTTCGTAGAATTCATTTCGATTTTATCT
GTAACGTGCTTGTCGTGTTTGGTGCTGGGTGCCTTGTCGGTGGGTGCGGCGGGCGGGGCG
GGGGCGGGAGGTTTCTTCACGTCATCAACCATCGATAAAAATGTTCGACCTGCGGCGGTG
GGGGAATGCATGACCGGTTTAATGACAGGCACCGGATCAGGGGTACTCCTATCGGGCGTT
TCCTTTTTAGAATCCAACGAGTGACGTACCTTCGTCTCTTCGAAACTTTCTAGAACGCAC
ATTCGACTGGTGATTGATGAGGTGCTCTTAGACATTTCCATAGAATGCGTTGATCTCTTC
TCGTCCAAACCGCATTCCAGGATTCTGTCGGTGCTCCCGCCGCCCGCCCTGCTGGCCAGC
GCGCTGCTCTCTGCCGAGCTGGAGACGGACCGCGCCTTGCCGTCCGCAGCGAAGCTGGTC
TTCTTCGCCTGGTTCAACTTCAACTCCTCCATCCAGGGAGCCTTGTGCTTCTCCCACTCG
CGGGCGCGCGGTTTTATCTCTTCCGCTTTCTCCGGCGGGGGCTTTTCGCTCGCCGGTACT
TCGTGTCCGTTGCTAAGTCCTATTTGCTGCGGCGTGTCGTCGCGTAGGACCTGACTAGGT
GGCCGTCGTCTTGGTGCTTTGACTCTGCCCGCTCTAGGATCGTTGAGTATGGAGTTACGT
TCGATATTGTCGAACGTACTATTGTTGGGTGCGTTGATGTTGGGCGTGTTGGTGTTGGGC
GTGTTGGTGTTGGTCGTGTTGGCGTTGGTCGTGGTTGCTGCGTTGGCGTTGGGTGTTGGC
TTGCTGGACGTAGCGCCGTCCGGTCGGTCCGAATCCACAACAACAGGCGTCGATTTTTCT
TTGTCAGAAGATGATAGCATTTTATTCTTCAGTCCGCTGAGCAAGCCTCCGACCCCGGAT
ACGGGCGTCGGACTTTTCTTTAACGGCACCGGCGGTTTCTTTACCTGGCCGTCGATACTT
CCGTCTGTAGCTGCTTCGTTGTGAATAAATTTCTCAGTTTCATTCTTACTTGTGTGCGTG
ACTGTACTATGTGTGCTAGTCTCTTTGCTGAGAGGGTTGTCTTTGTGCATACTTATCTTA
GACGTAGTCAACTCCTTGACCGAGGCGGTTTTTTCTGTGTATTTATTGAGTATGGGATAA
ATCGAGTTGGTTGCGGCTTTTGATGGACGTTCGGGTTTCTTCTCTTCAACTTCTGCTGTG
GCGGCAGGCAACAACTGTACAAAGTTATCGGGGAAGAGCCCGACGCGACCGTGCAGTTCT
CCCCGCCACCAGCCTCGATCGGGGGCTTCCTTCGATATAACAGTAACGATGTCGCCTTCG
TTGAGGTTCAGCTCATCGTCGTTCACGGCAGCATAAGTGAACAACACCCGACATTGCTCC
TTTACTGGCTTCGGTGGGAGCGCTGGAGCGAGTTCGAAGGGTGCCGGCTGCGGTGGGTCG
AGCATCACAACAAAGTTAGACGGAAACACACCCACGCGACCCTGGCGTCGACCTTGCCAC
CAGCCCTCCTCTACCTCTCCTAGAACTTCAAGCACGTCGCCGACGCAGAGTTCCAATTCA
TCCGGATTGACTGGTTGATAGCTGTACAGAGCCCGACACCGCCCTTGCACGCCCGTTGAT
CTCGTAGTAGCATGTTCGTTTAGAAGAGAAACGAAGTTGTCCGGGAACATGCCGCGGTTT
CCACGTAACTCGCCTCGCCACCAGCCCCCGGGCAATCTTTCAACGTCGCGTATCACGTCC
CCCGGTCTGATCGTCAGCTCGTCCGCTTCTGATGCATCATACGCGAAGTTAACGGTGCAA
GACACTTTTTGTGATAGATTTGTCTCCATTGCCGGCATTGAACACTAATCACAACATCAC
GTATTTTTTATTTCATTGATCCACAAATAGCACATTTC
(2498 bp)

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