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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40380_c0_seq2
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		DEAD_box_RNA_helicase_[Danaus_plexippus]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0010501 P RNA secondary structure unwinding
GO:0015030 C Cajal body
GO:0016020 C membrane
GO:0016607 C nuclear speck
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
Transcript
Level		FPKM:10.57 TPM:8.35
ORF EntryO_BomoMG17845_complete:A_BomoMG_comp40380_c0_seq2
Sequence
(Nucleotide)
TTTTATCTGTCCAACATTTAATCCATAATAAACTACAAAACTTTATATCTAGCTTTGTTG
ACCATGTGATGGGCCGAGGTCTGGAGTTTGAGGAGCTCTTCCTTGATGAGCCGCGTTATC
TCGGATTTGGCTTTGGCAACGGCCAGCTCCTGCGAGCTCTCTATGGCGAGGTACAGCTTG
CGTTCGCCCTCGGGCGGCGCCTTGCCCGGCTGGACGTACGTGCCGCGGACCGTTATACCG
GCCTCTGAGTACTCGCTGATTAGAGCTAGCGCCTCCTTGCTAGTGACCCTCCACCTGGCC
TGCTGCGGGAAGTCATTGATCTCCAGCTCGGTCTCGTACTTGCGGAACACCTCCTCGGTC
GGTTCGTTTGTGTTGTCGTCTCGCGGCTGGTAGTTGAGTCGCGTGTTCAACTTCGCGGCC
AGCTGTTCCGCCACTGTTTTAGCCGTGATGAGTGTCTGCGAAGGCGCGCCCTTGAGGATC
GCCTCGGCGGCTTGTTGCGTGGCGCCCTTCTGGTCTGCGCCGAGTCCCTTGGCGAGGTTG
ATGCGGGACGCGAGCCGCCGCGCTAACTCCAGCTTTCCGTCCGTCGCGCTAGCAGCAGCC
GCGGCGGGACCGGACACGGCCACGCCCGGTTTAATTTCCTTGACAATCTTCTTGGCAGCG
AGCATCGTCTCGATTTGTTGATCGAGATCTCCCTCCACGTCCTCGTCGTCGGAGTCCTGG
AGGCCGAGAGCCGCCTTCTGGTACTTTTTCTTTTCCGAAGCAGCCTGGGCTTCAGATTCG
TCAAACTTGAAACCTTTCCCACTAAATCCGCCTCCCGTGTGCACCTTCTTCCCGTCCTTC
TCCTGCGCCTCCTTGTACTTCTCCCACAGGTTCTTTAGTTCGGCGGGAGGACTGACTCCG
GCCAGCTCGAAGGCCCTGAGCACGTCGCCCGCGTACCGACCCTGCTCCGGAGTGAGGAAG
GTCCAGGCAAACCCTTTGTTGCCGGCGCGCCCGGTGCGTCCACATCTATGCACATAATCT
TCATAGTGATTCGGGCAGTCGTAGTTGACCACCAGAACTAGTTGCTTGACGTCCAGCCCT
CGGGCAGCAACGCTGGTCGCTACCAGCAACTTGACCTTGCCGTTCTTGAAGTCGACTATC
GTCGAGTCCCTGTCGAATTGATCAATCCCTCCGTGTAAGCTCATGCAAGAATACGAGGCC
TTCATGAGGTCTTTTAACAGACTGTCGGCGTTCTCCTGTTTGTCCACAAAGACAATGATG
CTTCCCATTTGACTGTAGAGTCCGAGGAGTTCCAGCAGTTTGAAGAATTTAGCTTCTTCC
TCTAGTATAGCGACGTGCTGTTCCACATCCTTGCAGACCACACTTCTTCCACCAACCTGT
ATTTCGATTGGCTTCTGTAATATCCGACGAGCGAGAGCCTCCATCTGTCTCGGGAAAGTT
GCGCTGAACATCACGGTCTGCCTGTCGGGTCTTATGTTGTCTATGATTTTCATTACCTGT
GGTTCGAATCCCATGTCAAACATTCTGTCGGCCTCGTCGAGCACGACGTACGTGACGCGG
CGCAGGTTGGTGACGCGCCCAGAGTTGGCGGCCAACATGTCGATCATGCGTCCCGGGGTG
CACACTATCATTTCGGCACCACGCTTCAGTTCAGCTATCTGTTCCGATATCCCGGTGCCC
CCATAAACGCAAACCACACGTAATCCGAGTGACTTTGCAAACTTCTTTATATCTTTGCCG
ATCTGCATGCAGAGTTCCCTTGTAGGAGTCATTATGAGGGCTATTGGTCCGTCTGTATCT
TCTAACGCCGGTTGGTCCAACACGTGCCGGAACATTGGCAGGATGAACGCTAATGTTTTG
CCTGAACCAGTCTTCGCAATTCCTATTAGATCTCTTCCAGACATAATAGCAGGAATCGCT
TGTGCTTGTATCGGGGTGGGCTTTTCAAAATTCAACTTCTTTAGAATGTCAAGTTCTTTT
TTACTGATACCGCAATGCGCCCATGTCCTGATCGGTTTCGGACAGCCTTTTCCCTTGACA
CGAATACCTTCCAACTCAGTCCTGTACGTTTCTACTTCCTCTGGTGTCATTCTTGCTAGT
TCATTCACTTCTGTGTAAAATGACTTCCTAAATTGCATGTAGTCTAAACTAGCATGGTCT
ACTTTGATCAAGTCTTTCCTCTGTTTGGAAGCAAGATTTGCAGCGGCATCTTTTATGTCT
TCCGTTTCTTCTTCAGACGAATACTCCAAGCCATCTTGATTTTGTTCTATCAGTTCACCC
TTATTTTTCTGCTCAGTGACCTTTTTTTTGGCAGTGCCAGTAAGAATTACAATGCCAGTG
CCACCTGTTGTTGGAACACTAATAATTCCTTTGGCTTGGTCCATTTGATTGACTTTACGC
ACTTCTTGTTGCACTTCTTGCATGTACGCATCCAAAGGATCAATTTCATCTTCTTCTTCT
TTCTTTTCTCCTATATTGTTTTTTTCTTTTCCTTCCGCATCTTCACCTTCATCACCAGAG
TCATCTTCAAGTGACCATTTCTTTGATGTCGGTATTTGTATATTAGTAACAATGCTTCCT
TTTTGAACTTCTTTTTTAGCGGATTCGATTTCTTTACGTTTACGTTCAGCCCTCCATCTC
TCTATGCGTTCACGACGTTTTTGCATTTCAGCTTCCAAGCGGTTTTGCTCTTCTTCCTTG
TCAACAGAGCCCGGGTTATATTCAGAAGAATCAGCTTTGCTACTCTTTTCCTTTGATTTT
GATCTCTCCCTTTCCTTCTCCGGTGACTTCTTTCTCGATGATTTACTAGATCCATTTCTT
TTATCATCTCTTTTATCACTTTTTCTGTCCCGATCTCGCTCACGACTACGATCTCTTTCC
CTACTGCGATCCCGTTCTCGGCTTCGGTCTCGTTTAGAGTCACGATCTCTGCTACGACTG
CGCTTCCTCTTTGAAGATTTCGAGCCCCGATCACGACTTCTTGATCTTGACCTCCTTCGT
TTACGATCCGGTGTGTCAGAACGACTTCGAGATCTACGTCGATCCCTTTCCCTATCACGG
TCTCTCCCACTCCTAACCATTTTTTAAAGCAAATATAAAGAGATTTTTACACGTTTTATT
TTTCTCATGCCTAAATCAACGGTGCCTTACTTAATACTAATAAAAGATTCTTGAAACAAA
ATGAGCTGTGAAATTTGGTTCGATTGCTATGAGATAAAAGTACGCATAACAAAATCACAA
AGCGCTCGCTTGCATCCACG
(3260 bp)

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