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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40374_c0_seq3
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_cullin-associated_NEDD8-dissociated_protein_1_[Bombyx_mori]
Ontology
GO:0000151 C ubiquitin ligase complex
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0010265 P SCF complex assembly
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0017025 F TBP-class protein binding
GO:0030154 P cell differentiation
GO:0031461 C cullin-RING ubiquitin ligase complex
GO:0043086 P negative regulation of catalytic activity
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045899 P positive regulation of RNA polymerase II transcription preinitiation complex assembly
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:7.28 TPM:5.75
ORF EntryO_BomoMG17819_complete:A_BomoMG_comp40374_c0_seq3
Sequence
(Nucleotide)
TTTTAGTTTTACCTAGTTTTTTGCAAATTTTTTCTCGTGTGAATTAATGTTGATTAAACT
GTTTTCAACTAATTAGCTCTCGTTAGGTCTTAATATTTTAAAATTATTTTTGGAAGAGAC
ACTGATAGGATTTGCACAATGGCTAATGTGTCTTACCATATAGCACATCTTCTTGAGAAG
ATGACATCCAATGATAAAGACTTCAGGTTTATGGCTACTAATGATTTGATGACAGAGTTG
CAAAAAGACAGTATCAAGCTCGACGATGATTCTGAAAGAAAAGTAGTAAAAATGCTTCTA
CGATTACTCGAAGACAAGAATGGTGAAGTTCAGAATTTAGCTGTGAAATGCCTCGGTCCT
CTTGTAAACAAAGTAAAGGAGTATCAGGTGGAAGGTATAGTTGATACACTTTGTGCCAAT
ATGCTTTCGGATACTGAGCAGCTAAGGGACATCAGCAGCATTGGATTAAAGACTGTAATT
TCTGAACTCCCACTGGGTTCCAATACTCTTGCTGCTAATGTTTGTAAGAAAATAACTGGT
AAATTGAGTAGTGCTATAGAAAAGCAAGAAGATGTTTCAGTTCAACTTGAAGCACTTGAT
ATTCTTGCTGATTTATTGAGCAGATTTGGTGGTTTATTGATATCATTTCATCCTATGCTG
CTCAATTCACTGTTGCCGCAGCTTGCATCTCCCCGTCAGGCTGTTCGCAAGCGCACCATA
GTTGCGTTGTCACATTTGGTCATGTCTTGCAATGCTTCGCTTTATAACAAGTTAATAGAC
CATCTACTGGAGGGTCTGAGCTCTTCAACTTCATCAAGTGTCAGCCGAACACACATACAG
TGCATTGCTTCTATATGTCGTCAAGCTGGACACCGATTTGGTGAACAATTGTGGCGTGTG
GCACCATCAGTTTTGGAATATTCAAAAGATACAGATGAAGAATTACGGGAACATTGCTTG
CAGGCTCTTGAAGCATTTGTCCTCAAGTGTCCTAAAGAAGTCCAACCACATATACCTACG
ATAATTGATCTATGCCTGAAGATGATAACATATGATCCAAATTACAACTATGAGGATGAA
GAGGGAGTGTGTGATGATGACGAAGAAATGGAAGATGACACATACTCACCTGATGCGGAT
CCTGAATCTGACTCAGAAGAGTATTCGGATGATGATGACATGTCCTGGAAAGTGAGACGT
GCTGCAGCTAAATGTCTTGAATCTGTGATAGCTACGCGTCACGAGCTCTTAGCCGAGATG
TACCATACAGTTTCGCCAGCTTTGATTGCTAGATTTAAAGAACGCGAGGAAAATGTGAAG
TGTGATATATTGAGCGCCTACACAGCTTTACTGAGAGCAACTCGACCTCCACCAGCCTTA
CAAATCTCTGGGACCCCGGCTGATAACTCACCACAGGCTTTACTAATTCAAACGGTGAGC
AGCATAGTGCGGGGCGCTCTGCGTGTGATACGCGGGCGCAGCGTGAGGGCGCGCGGCTGC
GCACTGTCGCTGCTACGGGAGCTGCTCGCTGCGGCGCCGGGCTGTCTGTCCGACCACGTG
GCGCGGGTGGTGCGCGCTCTCACACCGGCTCTCCTGGACAAGACCACAGCATCATCGATG
AAGATCGAGACGTTAGTGTTCATTGGTTGCCTGGTGCGCGGGCAGGGCGCCGGTATGCGA
GAGCACGCGGCGGCGCTGCTGCCGGCCGTGCTGGCAAGCGTGCACGACCCCTTCTACAAA
GTTACTGCTGAGGCTCTTAGGGTGCTTCAGCTTCTGGTCAAGATTATGCGGCCTCTGGAC
AATATAGAAGGCGCCGATGGTGAAGTAGAAGTTGCAGTTGAGCCTCCTCCGGAAGAGTTG
AAACAGTTTATACCTGCAATGTACGAGTGCAATCTAGTGAGACTGCGGGCCACAGATATG
GACCAGGAAGTAAAAGAACGAGCTATAGCTGCTTGCGGACAGCTCTTGTGTCATTTTGGA
GATTATTTACAGAACGAGCTCCCTGTGTGTCTTCCAATATTTTTAGAGCGACTTCGAAAC
GAAATAACTCGCCTCACTACCGTTAAAGCTTTGACAAAAGTAGCATCGTCACCGTTGAGG
ATCGATCTCACTCCTATTTTGTCTGATGCTGTACCTATTCTCGGGTCGTTCTTAAGAAAA
AATCAAAGAGCATTGAAATTGTCAACACTGGTCCTTCTAGACACTCTGGTACAGAATTAT
AGTCATGCCATCAGCATTGAACTTTTGAGCAAGGTGCTGATGGAGGTGCCGGCCTTGGTG
TGCGAGCAGGACCTGCACTGCGCGCAGACGGCTCTGGCGCTGGTGCGGTCCGCCTGCCTG
CGCTGTCCCGCCGCCCTCACCGCGGACGCGCGCTACGCCCTCACCCCCAAAATACTCGCG
CTCGCCAAGTCGCCGCTACTCCAAGGCGGCGCTCTCAAAGCAATGTTGGGCGTCCTGAGT
GCTCTGGTGTCGGCCGACGTGGCGGGCTGTTCGCGCCGCGAGCTGCTTGCCTTGTTGGTG
ATGCCCGTGCGTCGCTTGCAAGAGCACAACGCTACCGCACACCATATCAAACAGGCGTTC
CATTCATTGTCGAAATGCGTGGCGGCCGTGGTGGTGGAGGGGGGGCCGGAAGCGGGCGAG
GCGGTGCGAGGCTTCCTGCGCGACGCCGCACACCCGCCCTCCGACGCGCACCACATGTTC
TCGCTGCTCGCCCTCGCTGAGATCGGACGACATCTAGATCTGAGTTCGGTTCCGAATTTG
AAGGAAGTACTGCTCAATTCTTTCACGCCGTCTTCGGAAGAAGTGAAGTCCGCTGCTAGT
TACGCCCTCGGCTCCGTTGCAGTGGGTAACCTTCCAGAATTCTTGCCCTTCATCCTGGGT
GAGATCGAGGCTCAGCCCAAACGCCAGTACCTCCTGCTTCATTCGCTAAGAGAGATCATC
TCATCAGAGTCATGTACTCCGGAAGGCGTGGAAGCTTTACGACCCTTTATACCACAGATT
TGGGTACAATTATCTAAACATTGTCAGTGTGCTGAAGAAGGATCTCGGAATGTAGTAGCC
GAATGCTTGGGTAAATTGTGTCTCCTTGAACCAGAGGAATTGTTGCCACATCTAAAAGAA
TTCTTGAAGTCACCGGAGCCTTTGACTAGAACAACGGCCGTTACTGCTGTTAAGTTTACT
ATATCTGATCAGCCGCAAGCCATAGACGGGTTGCTGCGCGGCTGCATGTGCGAGCTGCTG
GTGCCGCTGCGGGACGCGGAGCTGGGCGTTCGGCGCGTGGCGCTCGTCGCCTTCAACTCG
GCCGCGCACAACAAGCCCTCGCTCGTCCGCGACCTGCTGCCGCAAGTGCTGCCCACCATC
TACGCTGAAACCAAAGTCAAGAAAGAACTGATTCGTGAAGTGGAGATGGGTCCGTTCAAG
CACTCGGTGGACGACGGTCTCGATCTTCGTAAGGCGGCCTTCGAGTGCATGTACACGTTG
CTGGGCACGTGCCTGGACCGCCTCGACGTGTTCGAGTTCCTGCGCCACGTGGAGGACGGG
CTCCGCGACCACTACGACATCAAGATGCTGACGTACCTCATGTGTGCTCGCCTGGCGCAG
CTGTGTCCGGCCGTCGTGCTGCAGAGGTTAGAAAGTCTAGTGGAGCCGTTGAGAGCGACG
TGTACAATGAAAGTCAAAGCTAATTCCGTGAAACAAGAATATGAGAAACAAGATGAATTG
AAACGGTCCGCCCTCCGCGCTACCGCTGCCTTGATGCAGATTCCAGAAGCAGATAAAAAT
CCTCATCTTATGGACTTCGTGACTCAAATTCGATCACTGCCCGAGCTTCAGCCGATCTTC
GAGTCTATCCTGAAGGATTCGAGCGGGGCGGCCGGCCTGGACTCGAACCTCATGGACCAA
AGCTAGCCAAGCACCTCACAAACGTCTCTCCGGGACTCACCGCAGTCCTGCCAGGCCAAC
GTGAACTTAATGGAGAAATTACGTGATATTCAGTTGGAATGACTACACTTAAAAATCATA
AAAATCTAAATGTGTTTTAAACTAACATGAACAGTGCAATAATATTTTGCTTCTCTCAAA
GTGCTGGTAAGATTATTACGGTGTTTTCAAATTTTGCATTTATGCATCGAAGTTTTTAGG
TAAATATCTATTTGTTTTATCGTGTTTTCTTTTAAACGTGCACGAGTATGAATAAATTGT
AATAGATATTTTTTTTTGTAAGCATATAAATAAGTTTCACTCAAATAAGTTGTAAAATTA
TCGAGTGTAATAACTAAGAAATGTAGTTTAATTCAACAGATTTATTACGAAATTACAAGA
AAATATCTTAAACACTGCTATGTTTCAAAGAGAACTTATGATAATACAACATAATCTCAA
TGCTCATTAAACTTAGGGACTAAAGACTCCGGGAATAAGACGTCACTTCACATTACACTG
TGACGGAGTGGGCGGCCAATTTGTATAACTATCGAAACTGCGCTATCGATTCGAATCGAT
AACTTACATTGTCTGAAAATTATATTCGAATGATTGCTAAATACTTAATCGATACCTCTC
GATGTTTGGTGACGTAATGTTGGAACAGATCTTGTTGACAAGTAAATGATTGTGTTATAT
ATTTTGTTTGTATTATTTTACTATATGCGTAATCTTCAAGTAGGAAACACTCTGACTTCT
TTCTGTTTATGTAATTTATATCATTAAAAAAAATTATGTTGATAAGCGAACCTAAGGGAG
(4740 bp)

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