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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40374_c0_seq2
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_cullin-associated_NEDD8-dissociated_protein_1_[Bombyx_mori]
Ontology
GO:0000151 C ubiquitin ligase complex
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0010265 P SCF complex assembly
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0017025 F TBP-class protein binding
GO:0030154 P cell differentiation
GO:0031461 C cullin-RING ubiquitin ligase complex
GO:0043086 P negative regulation of catalytic activity
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045899 P positive regulation of RNA polymerase II transcription preinitiation complex assembly
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:2.30 TPM:1.82
ORF EntryO_BomoMG17818_5prime_partial:A_BomoMG_comp40374_c0_seq2
Sequence
(Nucleotide)
GCATTTCGACAATGAATGGAACGTGGCGGGCTGTTCGCGCCGCGAGCTGCTTGCCTTGTT
GGTGATGCCCGTGCGTCGCTTGCAAGAGCACAACGCTACCGCACACCATATCAAACAGGC
GTTCCATTCATTGTCGAAATGCGTGGCGGCCGTGGTGGTGGAGGGGGGGCCGGAAGCGGG
CGAGGCGGTGCGAGGCTTCCTGCGCGACGCCGCACACCCGCCCTCCGACGCGCACCACAT
GTTCTCGCTGCTCGCCCTCGCTGAGATCGGACGACATCTAGATCTGAGTTCGGTTCCGAA
TTTGAAGGAAGTACTGCTCAATTCTTTCACGCCGTCTTCGGAAGAAGTGAAGTCCGCTGC
TAGTTACGCCCTCGGCTCCGTTGCAGTGGGTAACCTTCCAGAATTCTTGCCCTTCATCCT
GGGTGAGATCGAGGCTCAGCCCAAACGCCAGTACCTCCTGCTTCATTCGCTAAGAGAGAT
CATCTCATCAGAGTCATGTACTCCGGAAGGCGTGGAAGCTTTACGACCCTTTATACCACA
GATTTGGGTACAATTATCTAAACATTGTCAGTGTGCTGAAGAAGGATCTCGGAATGTAGT
AGCCGAATGCTTGGGTAAATTGTGTCTCCTTGAACCAGAGGAATTGTTGCCACATCTAAA
AGAATTCTTGAAGTCACCGGAGCCTTTGACTAGAACAACGGCCGTTACTGCTGTTAAGTT
TACTATATCTGATCAGCCGCAAGCCATAGACGGGTTGCTGCGCGGCTGCATGTGCGAGCT
GCTGGTGCCGCTGCGGGACGCGGAGCTGGGCGTTCGGCGCGTGGCGCTCGTCGCCTTCAA
CTCGGCCGCGCACAACAAGCCCTCGCTCGTCCGCGACCTGCTGCCGCAAGTGCTGCCCAC
CATCTACGCTGAAACCAAAGTCAAGAAAGAACTGATTCGTGAAGTGGAGATGGGTCCGTT
CAAGCACTCGGTGGACGACGGTCTCGATCTTCGTAAGGCGGCCTTCGAGTGCATGTACAC
GTTGCTGGGCACGTGCCTGGACCGCCTCGACGTGTTCGAGTTCCTGCGCCACGTGGAGGA
CGGGCTCCGCGACCACTACGACATCAAGATGCTGACGTACCTCATGTGTGCTCGCCTGGC
GCAGCTGTGTCCGGCCGTCGTGCTGCAGAGGTTAGAAAGTCTAGTGGAGCCGTTGAGAGC
GACGTGTACAATGAAAGTCAAAGCTAATTCCGTGAAACAAGAATATGAGAAACAAGATGA
ATTGAAACGGTCCGCCCTCCGCGCTACCGCTGCCTTGATGCAGATTCCAGAAGCAGATAA
AAATCCTCATCTTATGGACTTCGTGACTCAAATTCGATCACTGCCCGAGCTTCAGCCGAT
CTTCGAGTCTATCCTGAAGGATTCGAGCGGGGCGGCCGGCCTGGACTCGAACCTCATGGA
CCAAAGCTAGCCAAGCACCTCACAAACGTCTCTCCGGGACTCACCGCAGTCCTGCCAGGC
CAACGTGAACTTAATGGAGAAATTACGTGATATTCAGTTGGAATGACTACACTTAAAAAT
CATAAAAATCTAAATGTGTTTTAAACTAACATGAACAGTGCAATAATATTTTGCTTCTCT
CAAAGTGCTGGTAAGATTATTACGGTGTTTTCAAATTTTGCATTTATGCATCGAAGTTTT
TAGGTAAATATCTATTTGTTTTATCGTGTTTTCTTTTAAACGTGCACGAGTATGAATAAA
TTGTAATAGATATTTTTTTTTGTAAGCATATAAATAAGTTTCACTCAAATAAGTTGTAAA
ATTATCGAGTGTAATAACTAAGAAATGTAGTTTAATTCAACAGATTTATTACGAAATTAC
AAGAAAATATCTTAAACACTGCTATGTTTCAAAGAGAACTTATGATAATACAACATAATC
TCAATGCTCATTAAACTTAGGGACTAAAGACTCCGGGAATAAGACGTCACTTCACATTAC
ACTGTGACGGAGTGGGCGGCCAATTTGTATAACTATCGAAACTGCGCTATCGATTCGAAT
CGATAACTTACATTGTCTGAAAATTATATTCGAATGATTGCTAAATACTTAATCGATACC
TCTCGATGTTTGGTGACGTAATGTTGGAACAGATCTTGTTGACAAGTAAATGATTGTGTT
ATATATTTTGTTTGTATTATTTTACTATATGCGTAATCTTCAAGTAGGAAACACTCTGAC
TTCTTTCTGTTTATGTAATTTATATCATTAAAAAAAATTATGTTGATAAGCGAACCTAAG
GGAG
(2284 bp)

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