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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40368_c1_seq4
Scaffold_idBomo_Chr27
NCBI non-redundant
(nr)		PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0005324 F long-chain fatty acid transporter activity
GO:0005325 F long-chain fatty acid transporter activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005779 C integral component of peroxisomal membrane
GO:0006635 P fatty acid beta-oxidation
GO:0006810 P transport
GO:0007031 P peroxisome organization
GO:0015910 P long-chain fatty acid import into peroxisome
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0019899 F enzyme binding
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0042758 P long-chain fatty acid catabolic process
GO:0042760 P very long-chain fatty acid catabolic process
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0048471 C perinuclear region of cytoplasm
GO:0055085 P transmembrane transport
Transcript
Level		FPKM:2.76 TPM:2.18
ORF EntryO_BomoMG17801_5prime_partial:A_BomoMG_comp40368_c1_seq4
Sequence
(Nucleotide)
TAAGGCGTTTGACACAGTCCTATATGATAAGCTTTGGGACAAACTGGACAGGGCGGGTGT
ACCGGTTGAGGTCATATCAGTGTTACAGGAATGGTACCACTGCCAGCGGAACCAGGTGAG
ATGGGCGGGAGCTTTGTCCGGGCCATATGGCATGGAGTGTGGCGTGAGGCAGGGGGGGCT
GACCTCTCCTTTGTTATTTAACTTGTACATAAATGACCTTATCGGTGAGCTCAGCAGCAC
TCATACCGGTTGTCATATTGATAGTGTATGCGTCAATAATATTAGCTACGCGGACGATAT
GGTGCTGCTGGGACCATCGGCAGGTGCTATTCGTAAGATGCTGGCTATATGCGAGACCTA
CGCTGGGGAGCATGGACTGACCTACAGTAAAGCAAAAAGTAAAGTTCTGCTTTTCAAGGG
TAAGTCAGGTGCACCTGTTCCAGTTTGTGTTCCTTCAATTAAATTATATGATGAGGAACT
GCAGAGAGTGACCAGTTTTAAGTACCTGGGCCACATTGTAACGGATGATTTGTCCGATGA
CGCAGATTTGGAGCGGGAGCGCAGGGCATTGGCGGTCCGAGGAAACATGGTTGCCCGTAG
ATTCGCTCGGTGCTCCTCCCCAGTAAAAATTTCTTTGTTTAAGGCATTTTGCCAATCGTT
TTACGCGAGCAGTCTATGGGTGAATCATACTCAGCGGGCTGCCAGGGTCCTGCGCGTTCA
GTATAACAACATCTTCAGGGTGCTATTGCGGCTGCCTCCCTACTGCAGTGCGTCGCAAAT
GTTTGCTGATGCCCGGACGGATGGCTATCAAGCTATAATCCGAAAAAAGGTTGCCTCTTT
TTTAAGACGAGTGAGAGACAGTAGTAATGGCATCCTCGGGATGATTGCTTCTCGCGCTGA
TTGTCCGATCCAACATAAATGGATGTGTATAATTACCGGACAAGACTGACATATCCTTAT
TATTATTTTACTCTTCATTATGAAATGTGTATGATTTTCTTTTTATTTTATTTTTTCTCC
AAATTAATTGACTGATTGACATAATGATAGCTAATATTGACATAGAGTGGTTACTACTGT
ATTGATATAATTATGTGTTTCTAATTCATTTCCTTTGTATATTTAATTAATTGAATTAGT
ATATTGTTCATTTTCTATTTGTATTGTTGAAATGTTTGTGTGCTGACTATTGTATTATTA
TTATTTTATGGATTTTTTCTGAAATAAATGTTTTATTATTATTATTATTATTAATTGAAA
ACCAAAAATAAAGATATGCGGATTTACGCCATTAGTTTTATATAGGGTGTTGTAATCTCG
TATTCAGGTTAGGAACTGCTGACTTATAACACTTTTACTAGTGGAAGGGCATTTTATGAG
CCTACACGGGTAGGTACCGTTACCCTGCCTATTTCTAAGAAGCAGTAAGGTTTGAAGGGT
ACAGGACAGCCGTTGTACTGTAAATATTATCTGTTTTTGCAATACCATGGCTGCTTCAGT
ACAGTATGTTTTTTATATAATATATTCGTTAGTTTAATAGCTTTTACGAATGTCATATTT
AATCTCTAAATTATCACTTAATCAGAATCACTAAAAACAACACATAATCAAGTTATTGTT
CATTAAATACATATTATTTTCATAAGCATAAATTTTAGTTTTTTTTATATATTTACATCT
ATACTTACATTTATTACATCTTTTATTACAAATCTCTAAACATTTATTAAATTACTGTGA
TACGCAAAATTCGGGACGTTTTAAGCTTCCATATACTCCTCCGGTATGCGTACATTCAAA
ATTATACTTCAAACATACCGGTGTAATGTTTAAAATTGTATAACTTCGTTAATAATAGAA
CACACATGACGACCATATCTAGTATTCGTACGTTGAGTACAAAATGTGTATAAGTAAAAT
AGTTCCTCAAAGGAAAATGCACCTAAACTTATCGAGATAAGGTTTAAAATCAACTAAAGT
TTTTAAGTATTTAATTCATTATGCCTCCTGTGTGCTTCACTCCTTCGCGTTCTTTAACCA
CTCTGGTCTAATGACGTATAGCCAAGTCTTATCTACAGCATTCTGGAATGTTCTAACCGT
ACATTAAAAAAAGGGTGCTGCTATTGAACAGTTCTACCGTGTGCTGTTTTGGACACTGTC
AATAAGTCAAAACATAGTACAACAACTTTCAAGTTCGTCCCGATTTCCTGATGATTCAGA
AAGAAACGATTTTACGGTCTTTCAACAGCTTCACCTCAAAACATTTTAATGTAGCCCCCT
CTCCTCTATTTCGTATAATTTTAATTTCAATTAGATCTCGATAATCGATAATTTTAAATT
GCGTTGATTCACGTCCACGCTTTGGAGAAACGTCAGTCGCCATTTTGAAAAATAAAACCG
CGCCATTTTGAAAAATAAAACCGCGCCATTTTGTCATCGTTCCTGTCAGATACGTGTCGA
GACTTGGCTAGTGTTCGGCGGGGGGCTCCGCTGGCGTGCTGGTCGCGGCGCTGTTGATGG
CGGGGCTGGAGACCGCGCTCTCCTTGTCCAGCTTCCGGAACGACCAGTTGCCGGCGCCGT
CGAACTCCAAAACGTGCGTGTGGTACTTCCACACGCTCGGTCGGTGCGTGATTGAGAGTA
GCGTGATGCCCTCCTTGACAGCCTCCTCATACATGACGACCTCCGTCTCCATGGAAACGG
CACTCGTGCACTCGTCCAGCAGAGCGTACACCGGCCTGTGGTAGAACATCCTGGCCATGG
CGAGGCGCTGCTTCTCGCCGCCGGAGAGCGTGGCGCGCCAGTCGCGCACGGCCCGCAGCC
CGCCCAGCCGCGCCG
(2835 bp)

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