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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40367_c1_seq2
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		PREDICTED:_heterogeneous_nuclear_ribonucleoprotein_M-like_isoform_X1_[Amyelois_transitella]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0044822 F RNA binding
Transcript
Level		FPKM:6.19 TPM:4.89
ORF EntryO_BomoMG17784_complete:A_BomoMG_comp40367_c1_seq2
Sequence
(Nucleotide)
TTAAAGACAACAATAAACTACAACCTATAATGTTATTTTATTTTATTGAATTCTCTCATC
AAATGGTACAGCAAAAATTACGAAGCTTACACTAAGATTAAACCTAAAAGTTAATAAAGA
TTGTCAAAGGATAAACATCATTTGAAAGATATTGGACACTTTATCACGAGACACTACGAC
GTGGATTAAAACAGCACATTATCCGGGCAGCCGATTGCATACAAACCCCCACAAGAGAAC
GACTTGAACCACTTTCTCCTTAGCGTTTAAAAGTAGCGCACATCGATTGTGCGGCCGTCG
ATACGAGTCCTGTCGAACATTTTTATAGCTCTCTCCGCATCCCATTCCTTGTGGAATCGA
ACGATGGCCGTATCTGGAGCAGTCATTTCAGCGAACTTAACATCGCCACATTCACTGAAC
TTCTCTCTAATCAATTGCCAAGTCACTGTCTGTGGTAAATTGGTAATTATGACCATGTCT
GATGGTTTGTCCCTAGTGGATTGTTGGACTCCAGTGTCGCGGCCATATCCCTGGTTCGGT
ACTGAAACACCCAACGGTCTGCTTGTACCTGAAATGTTCGAAAGAGGTCCAGAATTCATC
TGATTGCCACCCATAACTCCAGAAGTAAGAACATTAGAATTCATTTCATTGTTTCCGATC
CCCAAACTAGCTGCTTGGTTCACATTTGCCTGTGCTGTTAGAACTGTTGCTAAATCGTTA
GCTGTCAAACCTTGTTGGAGTAACTGGTTTTGGAGTGCGCCTAAGCCAGTCAATCCCAAT
GCCTGTAGGCCTAAGCCTCCACCAAGAGCACTGTTGGCATTCAAAGCATTCGCAGACAAT
CCAGATCCTAAACCATTCAATGCAACACCAGCCGCTGTTGGAACTGCACCCAAAACTCCA
GCACCTATAGTAGGTGCTGTATTGGCCAAGTTCATGTTAGTTGTGTTGTTAGCCTGTGGT
AAATTTCTAGCTACGTCACGTAAAGGCTCGCCATTCGGTCCTAGTCCCATGCCGATTCCT
TTTAAGCCTTCAGGTAACCTAAGTTCTCCCTTGTCTGTTACTCCTCTGTCCATACGTACT
GTCATTCTTCGTTCATACAACATTTGTTTATCAAACATTGAAATAGCCTGTACTGCTTCA
ACTGGGTGGTCATACTCAATGACAGCAAATCCTCTACTATTACCGTCTTTATCAACAGCC
AAATCAATGTTACGTACTTTACCAGCCATTTTAAATACCTCCTTAATTTTGGCTTGGTCA
GCTTTGTAATCCAGATTTGCCACAAACACTTTCTTCACTAAAGGAGGTTGAACATTGATA
GATTCCAAAAATTGTAAACTTAATCCATATGTGTTTAAATTCTCTGGTTCTCTTGGCTTA
TTAATTCCCCAATTGTCTTTGTCATCTCTATTATTTCTCCCTTCTCTATGTTGTGGTCTA
GAAGTGTGCATTCTTCTTTCATTTCCAGTTTCTTCTTTTAGAACAAGTTTTCGTCCATTC
AACTCATACCGATGCATCACAAATAGTGCCTTCTTCATTGCCTCTGTGTTTGTAAATTCA
ACAATACCACATCCTCTTGCTTTTCCACTGTCATCGGTCAACAATTCTACATAAGCCACA
TCTCCAACTTTCTCTTTGAACAAATCTTTCAGTTCCGTCCAACGAAATTCGTATGGTATG
TTTGATACAAATAAGCGCCTGCTCTCGGTGCGATCTCGGTCTGACGACCGGTCTCTGTTG
GCGTCTGAGAACCTCGATGGCCTATCACCGCGTCTCGAGCGGTCGCGTTCTTTTTCTTTC
TGAAGATCCATGTCAGCGGAATTTATACTTGTTCAGAGTGCAAAGTACTATTTACAGTGG
TAGTTGTATTTAGCTGTTGTAAGATTTGTA
(1890 bp)

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