SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp40338_c0_seq2
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		ap_endonuclease_[Danaus_plexippus]
Ontology
GO:0003677 F DNA binding
GO:0003906 F DNA-(apurinic or apyrimidinic site) endonuclease activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008311 F double-stranded DNA 3'-5' exodeoxyribonuclease activity
GO:0008408 F 3'-5' exonuclease activity
GO:0016829 F lyase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:9.63 TPM:7.61
ORF EntryO_BomoMG17621_complete:A_BomoMG_comp40338_c0_seq2
Sequence
(Nucleotide)
AAAAATAACAACACATGTATTGAGCTACAAAATTTTATTTTGTTACGAAACAAAATGTAT
CAGTCCATATTTTCGCAATTTACCAAAGAAACGTAAAATCACAGAATCATTTGTCTTTTT
TTTTCAAATTGAAATATAAGATTACAAATCACGAGCTGCCGTGGCTTAATGTTTTTAACA
TTTTTCGAAATTTTTAAGCACACCTGCACCAATCCGCTTTTTCGGTTTAAAGAATAGACA
ACCGTTATTATAACCTACAATGTCTTCAACGGTTCAAGATTCAAGGTTCGCGGCGGCATA
ACCACATCTCATATTGTGGGTCTAACACTAATTGGGGGCGTCTTGCCTATCTGCAGCAAT
CAAATCGATTAAGCATTGAAAATTAATGAATTTCCTGGGTTTTTTTTACAAGCAACACTT
AATATATTATAGTAAAATTTTTGATTAGACACAAGTTTTTGCCAATATTTATAACTCGTA
TGAGTGTCGGGAGCAGTTGGGCGGGTCGGGCTGGTGGGCAGTTCGGCATCGGGACAAAGT
ACACAAGGACTTTATTCCTTCGGTTTCTCGGCTGTTGTTAGATTTAGAAAGAGCGCTATC
GGACAGTGGTCGCTGCCATACACCTTGTCGCGGATGACGTTGTCGCAGACCGACGGAATC
AGTCTGTCGGAAACTATGAAGTAATCCAAACGCCATCCGACGTTCTTCGAACGGGAATTC
ATCATGTACGTCCAGAAAGTGTACGAGCCCGTCTGGTCGGGGTGGAAATGTCGGAAGGTG
TCGACGAACCCGTCGCCGAGCAGCTGCGTCATGCCGGCGCGCTCCTCGTCCGTGAAGCCG
GCATTCTTTCTGTTCGTCTTCGGATTCGCTAAATCGATTTCCTTATGGGAAACGTTCATG
TCGCCGCATATTATCACAGGTTTCTTCTTATCTAATTCTTTGACGTGTTTGAGGAATTCC
TCGTTCCATCGCAGCCTTTTGGGCATTGTGACTAGTTTCCGGCCCGCGTTCGGTACGTAC
GTACAAATCAAGTAAAACTGTTCGTACTCCGCCGTTATAATGCGACCTTCATCGTCCAGC
TCTTCATTTTGCAAGCCATATTTGACATTCATCGCTAGCTTTGTCGTGTAAATGCCTACG
CCTGCGTAGCCATCTTTGTCCCCGGCCAACCAGTACGCATGATAGCCTGGAACATTAGCC
ACTTCGTCTGGCAATTTGTCCGTTGCACATTTCGTCTCTTGCAAACAGAAAATGTCCGGC
TTCTCGTATTTGATGTAATCCAAGCCTCCTTTGCTCATCCACGCTCTGATCCCGTCAACG
TTCCAACTCGCTATCTTGAAGTTCCATTCTTTGCCTTGCGTCGTCTTCGATTCATTTGTA
AAGTCAATATCTTCGTAATTTGTCGTGGATTTATTCTTGGGCGGTGCTTTCTTTTTCGCG
TCTTCGGTGTTCACCTTTTCTTCGACAGGCTTGCGTCGACGTTTTGTAGTTGGCTCACCA
GTGTCCTGTGGCTCCTCATGGGATTCAGCAGATACTTCTGCCTTCTTTTGACCCCGCCTT
CCTTTTGCAGGCTTTGGTTCAGGTTTTTCCTCTTCATCAACATTATCGTCTTCATTTTGT
GCAGCTTTTTGTTTTTCATCTTTTTTTGTGACCTTCCTTTTCTTAGAAGCTGGTTCATCT
TCCCTCACAGCATCATCAGTCTCTTCTTTGGCTGCTACTTTTTTGCCCTGATTTTTGCGA
CTTTTGGTTTCCTTCTTTTTTGGTTCCTCTACATTTTCCTCTTCTACTTCATCATCATCA
TTCTCTGCAGGCTTCTCAACAGCTTGGTTCTGAACTTTCTTCTTGCCTTTAGCAGCTTCT
GGCTTTCCTTCATCCTCAACAGTTTCAGATATATCAGACTCAGCTTCTTCAGCTTTGGCT
TTGCGTCCTCTGCCCCTACCTTTTGGTTTGTCTTCAACTTCATCTTCTATTTCTTGTTTA
GGTTTCCTACCTCTGCCTGTTCTAGGCTCTGGTTTTTTAACTTCCTTTTTGGTTTGTTTC
TTACGTCCCCTACCTGAAGGAACTTGTTCTTCTTCTATGTGACCATTTGTTTCTGAACCA
TCTTCACTAGGATTATTTTCCTCAGACACTGCCACTTCATCTTCAACTGAGGGTTCATCA
GTAGATTTATTTTCCACCGGAGGTTCCTCTACATTCTTCTTCCTTCCTTTTTTTGGTGCT
GTTTCCTCTATTTTACCATTCTCATCTTGTCCATTTGTGTCACCGGCAGCTTTCCTTCCG
CGTTTGGTTTTCTTTTCAGATACAATGTTCTTTTCATCAACTTCAGCTTCTACAGACTCC
GTTTCAGGATCTTCAACTACTTTTGCTTTGCCTCTTCCTTTTTTAGGTGCATCATTGTCT
GCTACTTTTGCTTCTGCTGCTTTCTTAGCTTTTGCTGATCTTGGTGCCAGATCTAAGAAG
ATATATTTGTCTTCGTTATTACTGTAACAGTCTTATTACTAGAAGATAATTGGAATTCAA
AAATAAAAAAACGCGTTAAACACCAATGGTGGCGGGCGAAA
(2561 bp)

- SilkBase 1999-2023 -